CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10021319m.g
(
Capsella rubella
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Carubv10021319m.g
T297531_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10021319m
NAC/NAM
14
131
ELFNADDEEIISRFLKRMIVNGDSWPEHFISDVDVFNKNPNEEFYSQSPKFLIVRPRTESCGKTDSCESGCWRVIGRDKLIKSEQTGKFLGFKRILKFCSKRKPREYKRIWVMEEYRL
Carubv10021319m
NAC/NAM
153
313
VSYLLSKHFSYLSTTSPLPPVQLLPAYGACLFDKEAEGLYYLQTIVDYDENTTWPRYVTNDVYRLHPLTLVDPQDDKFKEFGTCVFANRTNTCGKTGDCDGGGYWEIVQSHRGIRSKTGEILGYRRVFELVEEDEDEEEEPGNVCQGEDVKESWLIDEYRL
Links
Other
NAC/NAM
family TFs
Other
Capsella rubella
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.1301s0007
Capsella grandiflora
Cagra.1301s0007
N
0.996
ANAC023
Arabidopsis lyrata
scaffold_200589.1
N
0.921
ANAC023
Arabidopsis thaliana
AT1G60280
N
0.900