CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000690168
(
Malus domestica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
MDP0000690168
T298589_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC038
M07188_2.00
Arabidopsis thaliana
DNCKTRHNNHDCAMGYWA
TWRCKTGHDNNDYAMGNH
Dap-seq
OMalley et al.(2016)
ANAC038_col_a
0.945
0.851
ANAC038
M07189_2.00
Arabidopsis thaliana
TTDCTTGWNNHDYAMGHHAHH
DDTDDCKTRHDNNWCAAGHAA
Dap-seq
OMalley et al.(2016)
ANAC038_colamp_a
0.945
0.851
anac058
M00886_2.00
Arabidopsis thaliana
CGTTGTCT
AGACAACG
PBM
Franco-Zorrilla et al.(2014)
ANAC58
0.938
0.807
anac058
M07210_2.00
Arabidopsis thaliana
CKTGHNNNRCAMGYWA
TWRCKTGYNNNDCAMG
Dap-seq
OMalley et al.(2016)
ANAC058_col_a
0.938
0.807
anac058
M07211_2.00
Arabidopsis thaliana
TDCKTGHNNNDCAMGHHA
TDDCKTGHNNNDCAMGHA
Dap-seq
OMalley et al.(2016)
ANAC058_colamp_a
0.938
0.807
NAC098
M07239_2.00
Arabidopsis thaliana
CKTGTNNNDYAMGYHA
TDRCKTRHNNNACAMG
Dap-seq
OMalley et al.(2016)
CUC2_colamp_a
0.907
0.772
NAC098
M07240_2.00
Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG
CKTGWDNNDCAMGNWANNN
Dap-seq
OMalley et al.(2016)
CUC2_col
0.907
0.772
NAC079
M02373_2.00
Arabidopsis thaliana
TTGCGTRY
RYACGCAA
PBM
Weirauch et al.(2014)
pTH7399
0.883
0.737
NAC079
M07228_2.00
Arabidopsis thaliana
CBWNHNNHACACGYWA
TWRCGTGTDNNDNWVG
Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a
0.883
0.737
NAC079
M07229_2.00
Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH
DTWRCKTGWDNNDBAMGNWAN
Dap-seq
OMalley et al.(2016)
ANAC079_col
0.883
0.737
ANAC080
M02376_2.00
Arabidopsis lyrata
NBAMKNHWNN
NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH9230
0.882
0.746
NAC100
M02375_2.00
Arabidopsis thaliana
NBAMKNHWNN
NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH7239
0.871
0.737
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000690168
NAC/NAM
10
136
PPGFRFHPSDEELITFYLMNKINDATFTGRAIADVDLNKCEPWELPAKAKMGEKEWYFFSLRDRKYPTGVRTNRATSTGYWKTTGKDKEIFNSVTSELFGMKKTLVFYRGRAPRGEKSNWVMHEYRI
Links
Other
NAC/NAM
family TFs
Other
Malus domestica
TFs
297 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy