Pavir.Ab02181 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Ab02181 T298755_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
anac075
M07223_2.00
Arabidopsis thaliana
CTTSWNNNWYAMGYT

ARCKTRWNNNWSAAG
Dap-seq
OMalley et al.(2016)
ANAC075_col_a
0.887 0.561
PK27085.1
M01293_2.00
Cannabis sativa
AATTTATT

AATAAATT
PBM
Lambert et al.(2019)
pTH11262
0.885 0.561
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ab02181.1.p NAC/NAM 57 200

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
anac075 Arabidopsis thaliana AT4G29230 D 0.887
PK27085.1 Cannabis sativa PK27085.1 D 0.885
Bostr.12659s0396 Boechera stricta Bostr.12659s0396 I 0.890
29917.m002016 Ricinus communis 29917.m002016 I 0.918
29912.m005354 Ricinus communis 29912.m005354 I 0.887
29738.m001046 Ricinus communis 29738.m001046 I 0.896
Pm027280 Prunus mume Pm027280 I 0.884
Pm015625 Prunus mume Pm015625 I 0.944
Cla020673 Citrullus lanatus Cla020673 I 0.891
Cla011431 Citrullus lanatus Cla011431 I 0.886
Cla004701 Citrullus lanatus Cla004701 I 0.904
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I 0.930
ANAC073 Vitis vinifera VIT_12s0028g03050 I 0.882
VIT_11s0016g02880 Vitis vinifera VIT_11s0016g02880 I 0.887
SOG1 Vitis vinifera VIT_01s0011g02990 I 0.889
29983.m003125 Ricinus communis 29983.m003125 I 0.881
cassava11584.m1 Manihot esculenta cassava11584.m1 I 0.887
Aquca_054_00006 Aquilegia coerulea Aquca_054_00006 I 0.923
Aquca_036_00051 Aquilegia coerulea Aquca_036_00051 I 0.907
mgf018486m Mimulus guttatus mgf018486m I 0.956
Cucsa.288680 Cucumis sativus Cucsa.288680 I 0.886
Cucsa.283900 Cucumis sativus Cucsa.283900 I 0.891
Cucsa.046530 Cucumis sativus Cucsa.046530 I 0.884
Cucsa.011210 Cucumis sativus Cucsa.011210 I 0.917
cassava46566.m1 Manihot esculenta cassava46566.m1 I 0.892
cassava44586.m1 Manihot esculenta cassava44586.m1 I 0.887
cassava3690.m1 Manihot esculenta cassava3690.m1 I 0.943
cassava14633.m1 Manihot esculenta cassava14633.m1 I 0.892
cassava12330.valid.m1 Manihot esculenta cassava12330.valid.m1 I 0.897
TRIUR3_21992 Triticum urartu TRIUR3_21992 I 0.878
Traes_7DS_78B5508C0 Triticum aestivum Traes_7DS_78B5508C0 I 0.887
Traes_7BS_99BF8BA2F Triticum aestivum Traes_7BS_99BF8BA2F I 0.887
Si010735m.g Setaria italica Si010735m.g I 0.875
Si006639m.g Setaria italica Si006639m.g I 0.907
Si002301m.g Setaria italica Si002301m.g I 0.873
Si001527m.g Setaria italica Si001527m.g I 0.893
Sb10g009670 Sorghum bicolor Sb10g009670 I 0.900
Sb09g006018 Sorghum bicolor Sb09g006018 I 0.884
Sb09g006015 Sorghum bicolor Sb09g006015 I 0.888
Sb06g020103 Sorghum bicolor Sb06g020103 I 0.896
Pavir.Aa01341 Panicum virgatum Pavir.Aa01341 I 0.987
Sb03g030750 Sorghum bicolor Sb03g030750 I 0.873
Sb03g003170 Sorghum bicolor Sb03g003170 I 0.893
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I 0.930
Si017393m.g Setaria italica Si017393m.g I 0.974
Si019444m.g Setaria italica Si019444m.g I 0.916
Traes_7AS_6E6A5CD04 Triticum aestivum Traes_7AS_6E6A5CD04 I 0.878
Traes_6DL_2F3586557 Triticum aestivum Traes_6DL_2F3586557 I 0.938
Traes_6BL_B27806C89 Triticum aestivum Traes_6BL_B27806C89 I 0.938
Traes_6AL_C14335DC8 Triticum aestivum Traes_6AL_C14335DC8 I 0.945
TRAES3BF097400030CFD_g Triticum aestivum TRAES3BF097400030CFD_g I 0.879
TCM_037747 Theobroma cacao TCM_037747 I 0.887
TCM_016984 Theobroma cacao TCM_016984 I 0.932
TCM_011869 Theobroma cacao TCM_011869 I 0.883
TCM_008229 Theobroma cacao TCM_008229 I 0.881
Solyc05g026180.1 Solanum lycopersicum Solyc05g026180.1 I 0.882
Solyc05g009840.2 Solanum lycopersicum Solyc05g009840.2 I 0.882
Solyc02g093420.2 Solanum lycopersicum Solyc02g093420.2 I 0.910
PRUPE_ppa004775mg Prunus persica PRUPE_ppa004775mg I 0.884
PDK_20s1381351g001 Phoenix dactylifera PDK_20s1381351g001 I 0.948
SapurV1A.0212s0190 Salix purpurea SapurV1A.0212s0190 I 0.886
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I 0.906
SapurV1A.0012s0710 Salix purpurea SapurV1A.0012s0710 I 0.883
Pavir.J36494 Panicum virgatum Pavir.J36494 I 0.878
Pavir.J13205 Panicum virgatum Pavir.J13205 I 0.893
Pavir.J05241 Panicum virgatum Pavir.J05241 I 0.873
Pavir.Gb01338 Panicum virgatum Pavir.Gb01338 I 0.916
Pavir.Ga02302 Panicum virgatum Pavir.Ga02302 I 0.894
Pavir.Ga02265 Panicum virgatum Pavir.Ga02265 I 0.893
Pavir.Ga01597 Panicum virgatum Pavir.Ga01597 I 0.916
Pavir.Eb00261 Panicum virgatum Pavir.Eb00261 I 0.893
Pavir.Da01643 Panicum virgatum Pavir.Da01643 I 0.903
SapurV1A.0304s0050 Salix purpurea SapurV1A.0304s0050 I 0.898
SapurV1A.0716s0010 Salix purpurea SapurV1A.0716s0010 I 0.962
PDK_20s1306131g001 Phoenix dactylifera PDK_20s1306131g001 I 0.880
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I 0.901
PK28347.1 Cannabis sativa PK28347.1 I 0.906
PK25812.1 Cannabis sativa PK25812.1 I 0.892
PK17141.1 Cannabis sativa PK17141.1 I 0.929
Thhalv10024980m.g Eutrema salsugineum Thhalv10024980m.g I 0.890
SapurV1A.3101s0030 Salix purpurea SapurV1A.3101s0030 I 0.895
SapurV1A.2846s0020 Salix purpurea SapurV1A.2846s0020 I 0.898
SapurV1A.2554s0030 Salix purpurea SapurV1A.2554s0030 I 0.895
SapurV1A.1828s0030 Salix purpurea SapurV1A.1828s0030 I 0.895
SapurV1A.1388s0020 Salix purpurea SapurV1A.1388s0020 I 0.962
SapurV1A.1259s0030 Salix purpurea SapurV1A.1259s0030 I 0.884
Pavir.Ab02919 Panicum virgatum Pavir.Ab02919 I 0.925
Pavir.Aa00442 Panicum virgatum Pavir.Aa00442 I 0.916
orange1.1g021635m.g Citrus sinensis orange1.1g021635m.g I 0.886
evm.TU.supercontig_83.99 Carica papaya evm.TU.supercontig_83.99 I 0.887
evm.TU.supercontig_78.40 Carica papaya evm.TU.supercontig_78.40 I 0.887
Eucgr.K01061 Eucalyptus grandis Eucgr.K01061 I 0.885
Eucgr.J02254 Eucalyptus grandis Eucgr.J02254 I 0.912
Eucgr.G02349 Eucalyptus grandis Eucgr.G02349 I 0.881
Eucgr.D00592 Eucalyptus grandis Eucgr.D00592 I 0.889
Eucgr.C00958 Eucalyptus grandis Eucgr.C00958 I 0.887
Ciclev10017822m.g Citrus clementina Ciclev10017822m.g I 0.886
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I 0.923
Carubv10004602m.g Capsella rubella Carubv10004602m.g I 0.887
Cagra.0495s0057 Capsella grandiflora Cagra.0495s0057 I 0.887
Bostr.7867s0767 Boechera stricta Bostr.7867s0767 I 0.887
gene03875-v1.0-hybrid Fragaria vesca gene03875-v1.0-hybrid I 0.887
gene11344-v1.0-hybrid Fragaria vesca gene11344-v1.0-hybrid I 0.886
MDP0000663564 Malus domestica MDP0000663564 I 0.919
MDP0000124509 Malus domestica MDP0000124509 I 0.886
Lus10039873.g Linum usitatissimum Lus10039873.g I 0.915
Lus10021708.g Linum usitatissimum Lus10021708.g I 0.905
Lus10018637.g Linum usitatissimum Lus10018637.g I 0.915
Gorai.010G078900 Gossypium raimondii Gorai.010G078900 I 0.915
Gorai.009G028900 Gossypium raimondii Gorai.009G028900 I 0.887
Gorai.008G186300 Gossypium raimondii Gorai.008G186300 I 0.881
Gorai.008G155200 Gossypium raimondii Gorai.008G155200 I 0.881
Gorai.007G075300 Gossypium raimondii Gorai.007G075300 I 0.896
Gorai.006G034600 Gossypium raimondii Gorai.006G034600 I 0.927
gene27940-v1.0-hybrid Fragaria vesca gene27940-v1.0-hybrid I 0.946
Bostr.7867s0691 Boechera stricta Bostr.7867s0691 I 0.882
OBART05G06140 Oryza barthii OBART05G06140 I 0.895
GSMUA_Achr6G05480_001 Musa acuminata GSMUA_Achr6G05480_001 I 0.896
GSMUA_Achr4G30940_001 Musa acuminata GSMUA_Achr4G30940_001 I 0.871
GSMUA_Achr4G02730_001 Musa acuminata GSMUA_Achr4G02730_001 I 0.872
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I 0.907
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I 0.892
GRMZM2G379608 Zea mays GRMZM2G379608 I 0.891
GRMZM2G166721 Zea mays GRMZM2G166721 I 0.893
GRMZM2G112681 Zea mays GRMZM2G112681 I 0.892
GRMZM2G086768 Zea mays GRMZM2G086768 I 0.891
GRMZM2G078954 Zea mays GRMZM2G078954 I 0.891
GRMZM2G027309 Zea mays GRMZM2G027309 I 0.891
GSMUA_Achr7G09510_001 Musa acuminata GSMUA_Achr7G09510_001 I 0.885
GSMUA_Achr9G01880_001 Musa acuminata GSMUA_Achr9G01880_001 I 0.941
OBART01G05840 Oryza barthii OBART01G05840 I 0.883
OB06G19430 Oryza brachyantha OB06G19430 I 0.903
OB05G15600 Oryza brachyantha OB05G15600 I 0.881
OB01G15780 Oryza brachyantha OB01G15780 I 0.883
MTR_1g093680 Medicago truncatula MTR_1g093680 I 0.888
MTR_1g093670 Medicago truncatula MTR_1g093670 I 0.891
MLOC_75795 Hordeum vulgare MLOC_75795 I 0.894
LPERR05G05170 Leersia perrieri LPERR05G05170 I 0.874
LPERR01G05530 Leersia perrieri LPERR01G05530 I 0.883
GSMUA_AchrUn_randomG28610_001 Musa acuminata GSMUA_AchrUn_randomG28610_001 I 0.889
GSMUA_AchrUn_randomG17050_001 Musa acuminata GSMUA_AchrUn_randomG17050_001 I 0.958
GLYMA20G32690 Glycine max GLYMA20G32690 I 0.915
GLYMA08G03590 Glycine max GLYMA08G03590 I 0.887
GLYMA05G36031 Glycine max GLYMA05G36031 I 0.890
Bra012470 Brassica rapa Bra012470 I 0.882
Bra011090 Brassica rapa Bra011090 I 0.889
Bo7g113660 Brassica oleracea Bo7g113660 I 0.889
Bo7g113170 Brassica oleracea Bo7g113170 I 0.894
Bo7g052860 Brassica oleracea Bo7g052860 I 0.882
Bo1g016630 Brassica oleracea Bo1g016630 I 0.889
BGIOSGA022664 Oryza indica BGIOSGA022664 I 0.889
BGIOSGA018654 Oryza indica BGIOSGA018654 I 0.895
BGIOSGA002220 Oryza indica BGIOSGA002220 I 0.883
AMTR_s00060p00054700 Amborella trichopoda AMTR_s00060p00054700 I 0.895
AMTR_s00049p00217400 Amborella trichopoda AMTR_s00049p00217400 I 0.921
Bra024152 Brassica rapa Bra024152 I 0.889
BRADI1G43840 Brachypodium distachyon BRADI1G43840 I 0.908
GLYMA05G09110 Glycine max GLYMA05G09110 I 0.934
ANAC073 Arabidopsis lyrata Al_scaffold_0007_1273 I 0.872
GLYMA02G11140 Glycine max GLYMA02G11140 I 0.892
GLYMA01G22510 Glycine max GLYMA01G22510 I 0.906
GLYMA01G00880 Glycine max GLYMA01G00880 I 0.887
anac075 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001013 I 0.887
F775_30638 Aegilops tauschii F775_30638 I 0.938
F775_16052 Aegilops tauschii F775_16052 I 0.875
BRADI3G47627 Brachypodium distachyon BRADI3G47627 I 0.941
BRADI2G33307 Brachypodium distachyon BRADI2G33307 I 0.900
BRADI2G05700 Brachypodium distachyon BRADI2G05700 I 0.894
AMTR_s00021p00209320 Amborella trichopoda AMTR_s00021p00209320 I 0.904
ORGLA05G0055000 Oryza glaberrima ORGLA05G0055000 I 0.895
PGSC0003DMG400016896 Solanum tuberosum PGSC0003DMG400016896 I 0.882
PGSC0003DMG400012607 Solanum tuberosum PGSC0003DMG400012607 I 0.920
PGSC0003DMG400000809 Solanum tuberosum PGSC0003DMG400000809 I 0.901
ONIVA05G06750 Oryza nivara ONIVA05G06750 I 0.895
ONIVA06G11950 Oryza nivara ONIVA06G11950 I 0.891
OPUNC01G05680 Oryza punctata OPUNC01G05680 I 0.883
ORGLA06G0096700 Oryza glaberrima ORGLA06G0096700 I 0.891
OS05G0194500 Oryza sativa OS05G0194500 I 0.895
TRIUR3_27393 Triticum urartu TRIUR3_27393 I 0.873
OPUNC05G05600 Oryza punctata OPUNC05G05600 I 0.891
OS01G0191300 Oryza sativa OS01G0191300 I 0.883
OPUNC06G09830 Oryza punctata OPUNC06G09830 I 0.877
ORUFI06G10770 Oryza rufipogon ORUFI06G10770 I 0.891
ORUFI05G06530 Oryza rufipogon ORUFI05G06530 I 0.900
ORGLA01G0055000 Oryza glaberrima ORGLA01G0055000 I 0.883
ORUFI01G06380 Oryza rufipogon ORUFI01G06380 I 0.883
ORGLA01G0213300 Oryza glaberrima ORGLA01G0213300 I 0.871
ONIVA01G06690 Oryza nivara ONIVA01G06690 I 0.883
OMERI06G11940 Oryza meridionalis OMERI06G11940 I 0.891
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I 0.942
OBART06G10240 Oryza barthii OBART06G10240 I 0.891
POPTR_0018s06790 Populus trichocarpa POPTR_0018s06790 I 0.886
OGLUM01G06390 Oryza glumaepatula OGLUM01G06390 I 0.883
POPTR_0017s04800 Populus trichocarpa POPTR_0017s04800 I 0.894
OLONG_008708 Oryza longistaminata OLONG_008708 I 0.883
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I 0.914
OGLUM05G06420 Oryza glumaepatula OGLUM05G06420 I 0.892
OGLUM06G11140 Oryza glumaepatula OGLUM06G11140 I 0.891
POPTR_0006s15740 Populus trichocarpa POPTR_0006s15740 I 0.886
OLONG_017685 Oryza longistaminata OLONG_017685 I 0.891
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I 0.875
OLONG_021085 Oryza longistaminata OLONG_021085 I 0.900
POPTR_0007s01350 Populus trichocarpa POPTR_0007s01350 I 0.881
OS02G0594800 Oryza sativa OS02G0594800 N 0.956
OLONG_005904 Oryza longistaminata OLONG_005904 N 0.895
ORUFI02G23890 Oryza rufipogon ORUFI02G23890 N 0.956
Sb04g024780 Sorghum bicolor Sb04g024780 N 0.962
F775_14938 Aegilops tauschii F775_14938 N 0.899
BRADI5G13450 Brachypodium distachyon BRADI5G13450 N 0.921
BGIOSGA014881 Oryza indica BGIOSGA014881 N 0.895
ORUFI04G17470 Oryza rufipogon ORUFI04G17470 N 0.895
BGIOSGA006133 Oryza indica BGIOSGA006133 N 0.956
Si012740m.g Setaria italica Si012740m.g N 0.923
chr1.CM0001.370.nd Lotus japonicus chr1.CM0001.370.nd N 0.922
F775_00415 Aegilops tauschii F775_00415 N 0.875
GRMZM2G104078 Zea mays GRMZM2G104078 N 0.963
ONIVA02G25300 Oryza nivara ONIVA02G25300 N 0.956
Ca_23230 Cicer arietinum Ca_23230 N 0.898
OMERI02G22200 Oryza meridionalis OMERI02G22200 N 0.956
OMERI01G02010 Oryza meridionalis OMERI01G02010 N 0.895
OLONG_021848 Oryza longistaminata OLONG_021848 N 0.957
LPERR02G18380 Leersia perrieri LPERR02G18380 N 0.946
LPERR04G12800 Leersia perrieri LPERR04G12800 N 0.890
OB02G30060 Oryza brachyantha OB02G30060 N 0.956
OGLUM04G16020 Oryza glumaepatula OGLUM04G16020 N 0.895
OGLUM02G22980 Oryza glumaepatula OGLUM02G22980 N 0.956
OBART02G22660 Oryza barthii OBART02G22660 N 0.956
ONIVA04G14230 Oryza nivara ONIVA04G14230 N 0.895
OPUNC04G13980 Oryza punctata OPUNC04G13980 N 0.944
ORGLA02G0193300 Oryza glaberrima ORGLA02G0193300 N 0.956
Traes_2DL_3757D78B3 Triticum aestivum Traes_2DL_3757D78B3 N 0.875
Traes_2DL_AE270CBAA1 Triticum aestivum Traes_2DL_AE270CBAA1 N 0.875
Traes_2DL_AE270CBAA Triticum aestivum Traes_2DL_AE270CBAA N 0.875
MDP0000283975 Malus domestica MDP0000283975 N 0.889
GLYMA16G07501 Glycine max GLYMA16G07501 N 0.909
GLYMA19G00640 Glycine max GLYMA19G00640 N 0.937
GLYMA19G08510 Glycine max GLYMA19G08510 N 0.912
Lus10003668.g Linum usitatissimum Lus10003668.g N 0.933
GRMZM2G038073 Zea mays GRMZM2G038073 N 0.962
OPUNC02G20570 Oryza punctata OPUNC02G20570 N 0.956
OBART04G16110 Oryza barthii OBART04G16110 N 0.895