CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ca01325
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.Ca01325
T298789_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ca01325.1.p
NAC/NAM
11
150
PGGDGSFAPADDGLLALLRRKLAGEPLPAAAAAHFHDADIYAADPAALTAAHRPAPPGRKGEAGSCWFFFTHVRPKSASDSRKSRRVGGGEGTWHSERAPRRVLDGEGNCVGHGQYFSYKRRAGTCCSTRTDWYMVEFSE
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J06948
Panicum virgatum
Pavir.J06948
N
0.991
Si038541m.g
Setaria italica
Si038541m.g
N
0.974
Si012058m.g
Setaria italica
Si012058m.g
N
0.974
Sb09g018837
Sorghum bicolor
Sb09g018837
N
0.918