Pavir.Db00380 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Db00380 T298810_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Db00380.1.p NAC/NAM 14 149

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Solyc04g009440.2 Solanum lycopersicum Solyc04g009440.2 I 0.879
ORGLA04G0270600 Oryza glaberrima ORGLA04G0270600 I 0.874
ORGLA04G0119700 Oryza glaberrima ORGLA04G0119700 I 0.896
OPUNC05G14600 Oryza punctata OPUNC05G14600 I 0.881
ONIVA04G29890 Oryza nivara ONIVA04G29890 I 0.874
ONIVA04G13100 Oryza nivara ONIVA04G13100 I 0.896
cassava27052.m1 Manihot esculenta cassava27052.m1 I 0.970
mgf002183m Mimulus guttatus mgf002183m I 0.897
OMERI05G14410 Oryza meridionalis OMERI05G14410 I 0.874
mgf004020m Mimulus guttatus mgf004020m I 0.895
OGLUM05G17550 Oryza glumaepatula OGLUM05G17550 I 0.881
OGLUM04G30580 Oryza glumaepatula OGLUM04G30580 I 0.874
OGLUM04G14830 Oryza glumaepatula OGLUM04G14830 I 0.896
OBART05G16540 Oryza barthii OBART05G16540 I 0.881
ORGLA05G0143100 Oryza glaberrima ORGLA05G0143100 I 0.881
ORUFI04G16370 Oryza rufipogon ORUFI04G16370 I 0.896
ORUFI04G32410 Oryza rufipogon ORUFI04G32410 I 0.874
Si010680m.g Setaria italica Si010680m.g I 0.984
Si010553m.g Setaria italica Si010553m.g I 0.891
Sb07g005610 Sorghum bicolor Sb07g005610 I 0.981
Traes_7DL_BDD45DB24 Triticum aestivum Traes_7DL_BDD45DB24 I 0.973
Sb06g019010 Sorghum bicolor Sb06g019010 I 0.894
Si036303m.g Setaria italica Si036303m.g I 0.900
POPTR_0007s04780 Populus trichocarpa POPTR_0007s04780 I 0.888
POPTR_0005s07060 Populus trichocarpa POPTR_0005s07060 I 0.885
TRIUR3_29250 Triticum urartu TRIUR3_29250 I 0.973
OS05G0415400 Oryza sativa OS05G0415400 I 0.881
OS04G0691300 Oryza sativa OS04G0691300 I 0.874
OS04G0460600 Oryza sativa OS04G0460600 I 0.896
ORUFI05G17750 Oryza rufipogon ORUFI05G17750 I 0.881
OBART04G14970 Oryza barthii OBART04G14970 I 0.896
BGIOSGA014034 Oryza indica BGIOSGA014034 I 0.874
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I 0.895
Pavir.J04049 Panicum virgatum Pavir.J04049 I 0.877
Pavir.J36955 Panicum virgatum Pavir.J36955 I 0.989
GRMZM2G167018 Zea mays GRMZM2G167018 I 0.980
GRMZM2G063522 Zea mays GRMZM2G063522 I 0.990
GRMZM2G009892 Zea mays GRMZM2G009892 I 0.883
SapurV1A.0311s0230 Salix purpurea SapurV1A.0311s0230 I 0.885
GLYMA05G32850 Glycine max GLYMA05G32850 I 0.877
F775_30297 Aegilops tauschii F775_30297 I 0.973
SapurV1A.2021s0010 Salix purpurea SapurV1A.2021s0010 I 0.881
BRADI3G46900 Brachypodium distachyon BRADI3G46900 I 0.886
BRADI2G03467 Brachypodium distachyon BRADI2G03467 I 0.883
BRADI1G32660 Brachypodium distachyon BRADI1G32660 I 0.988
BGIOSGA018048 Oryza indica BGIOSGA018048 I 0.881
BGIOSGA016546 Oryza indica BGIOSGA016546 I 0.896
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.880
MTR_1g008740 Medicago truncatula MTR_1g008740 I 0.876
MLOC_65286 Hordeum vulgare MLOC_65286 I 0.876
ONIVA05G17220 Oryza nivara ONIVA05G17220 I 0.881
Pavir.Ga00022 Panicum virgatum Pavir.Ga00022 I 0.982
LPERR04G11740 Leersia perrieri LPERR04G11740 I 0.899
MTR_8g094580 Medicago truncatula MTR_8g094580 I 0.880
Pavir.Gb01850 Panicum virgatum Pavir.Gb01850 I 0.871
GSMUA_Achr7G23250_001 Musa acuminata GSMUA_Achr7G23250_001 I 0.896
Gorai.006G088400 Gossypium raimondii Gorai.006G088400 I 0.879
Traes_2AL_CA89051FD Triticum aestivum Traes_2AL_CA89051FD N 0.974
PK23481.1 Cannabis sativa PK23481.1 N 0.891
Eucgr.F01449 Eucalyptus grandis Eucgr.F01449 N 0.882
chr3.CM0279.430.nd Lotus japonicus chr3.CM0279.430.nd N 0.891
Traes_7AL_BE3253C8F Triticum aestivum Traes_7AL_BE3253C8F N 0.989
gene10469-v1.0-hybrid Fragaria vesca gene10469-v1.0-hybrid N 0.898
29650.m000275 Ricinus communis 29650.m000275 N 0.894
Carubv10011081m.g Capsella rubella Carubv10011081m.g N 0.941
Cla023574 Citrullus lanatus Cla023574 N 0.909
Pavir.Ba02036 Panicum virgatum Pavir.Ba02036 N 0.896
Ca_13537 Cicer arietinum Ca_13537 N 0.893
Pavir.Gb00488 Panicum virgatum Pavir.Gb00488 N 0.985
TRIUR3_34020 Triticum urartu TRIUR3_34020 N 0.974
Pavir.Fb00532 Panicum virgatum Pavir.Fb00532 N 0.928
Pavir.Bb02323 Panicum virgatum Pavir.Bb02323 N 0.895
Cagra.6372s0006 Capsella grandiflora Cagra.6372s0006 N 0.941
TRIUR3_03895 Triticum urartu TRIUR3_03895 N 0.989
Si017567m.g Setaria italica Si017567m.g N 0.880
OB02G29280 Oryza brachyantha OB02G29280 N 0.886
MTR_2g064470 Medicago truncatula MTR_2g064470 N 0.899
MLOC_53744 Hordeum vulgare MLOC_53744 N 0.989
MLOC_25708 Hordeum vulgare MLOC_25708 N 0.979
LPERR06G20430 Leersia perrieri LPERR06G20430 N 0.991
LPERR02G17680 Leersia perrieri LPERR02G17680 N 0.886
GSMUA_Achr9G10210_001 Musa acuminata GSMUA_Achr9G10210_001 N 0.930
GSMUA_Achr6G31350_001 Musa acuminata GSMUA_Achr6G31350_001 N 0.871
GSMUA_Achr6G30050_001 Musa acuminata GSMUA_Achr6G30050_001 N 0.908
GSMUA_Achr3G23360_001 Musa acuminata GSMUA_Achr3G23360_001 N 0.915
GRMZM5G898290 Zea mays GRMZM5G898290 N 0.885
GLYMA08G18470 Glycine max GLYMA08G18470 N 0.927
F775_26920 Aegilops tauschii F775_26920 N 0.989
BRADI3G17287 Brachypodium distachyon BRADI3G17287 N 0.887
OBART04G25950 Oryza barthii OBART04G25950 N 0.935
OBART06G24550 Oryza barthii OBART06G24550 N 0.965
OGLUM06G25850 Oryza glumaepatula OGLUM06G25850 N 0.965
Si014180m.g Setaria italica Si014180m.g N 0.916
Si006975m.g Setaria italica Si006975m.g N 0.995
Sb10g027100 Sorghum bicolor Sb10g027100 N 0.986
Sb06g028800 Sorghum bicolor Sb06g028800 N 0.888
PRUPE_ppa008801mg Prunus persica PRUPE_ppa008801mg N 0.903
OS06G0675600 Oryza sativa OS06G0675600 N 0.965
ORUFI06G26420 Oryza rufipogon ORUFI06G26420 N 0.965
ORGLA06G0205600 Oryza glaberrima ORGLA06G0205600 N 0.965
ORGLA04G0226100 Oryza glaberrima ORGLA04G0226100 N 0.944
OPUNC06G22270 Oryza punctata OPUNC06G22270 N 0.967
ONIVA02G35380 Oryza nivara ONIVA02G35380 N 0.965
OMERI06G24740 Oryza meridionalis OMERI06G24740 N 0.965
OMERI04G21180 Oryza meridionalis OMERI04G21180 N 0.952
OLONG_010248 Oryza longistaminata OLONG_010248 N 0.994
BGIOSGA023457 Oryza indica BGIOSGA023457 N 0.965