Pavir.Fb00532 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Fb00532 T298849_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fb00532.1.p NAC/NAM 12 139

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_30297 Aegilops tauschii F775_30297 I 0.953
F775_18200 Aegilops tauschii F775_18200 N 0.901
F775_26920 Aegilops tauschii F775_26920 N 0.945
BRADI1G32660 Brachypodium distachyon BRADI1G32660 I 0.912
evm.TU.supercontig_10.25 Carica papaya evm.TU.supercontig_10.25 N 0.897
Ca_13537 Cicer arietinum Ca_13537 N 0.902
Eucgr.F01449 Eucalyptus grandis Eucgr.F01449 N 0.876
MLOC_53744 Hordeum vulgare MLOC_53744 N 0.936
MLOC_25708 Hordeum vulgare MLOC_25708 N 0.920
LPERR08G05360 Leersia perrieri LPERR08G05360 N 0.903
LPERR06G20430 Leersia perrieri LPERR06G20430 N 0.942
chr3.CM0279.430.nd Lotus japonicus chr3.CM0279.430.nd N 0.884
MTR_2g064470 Medicago truncatula MTR_2g064470 N 0.896
GSMUA_Achr9G26140_001 Musa acuminata GSMUA_Achr9G26140_001 N 0.890
GSMUA_Achr8G33310_001 Musa acuminata GSMUA_Achr8G33310_001 N 0.911
GSMUA_Achr6G31350_001 Musa acuminata GSMUA_Achr6G31350_001 N 0.913
GSMUA_Achr5G00500_001 Musa acuminata GSMUA_Achr5G00500_001 N 0.907
OBART12G18490 Oryza barthii OBART12G18490 N 0.871
OBART06G24550 Oryza barthii OBART06G24550 N 0.939
OBART02G05020 Oryza barthii OBART02G05020 N 0.908
OB08G15810 Oryza brachyantha OB08G15810 N 0.938
OB04G32440 Oryza brachyantha OB04G32440 N 0.882
ORGLA08G0051100 Oryza glaberrima ORGLA08G0051100 N 0.943
ORGLA06G0205600 Oryza glaberrima ORGLA06G0205600 N 0.939
ORGLA12G0157500 Oryza glaberrima ORGLA12G0157500 N 0.871
ORGLA02G0046100 Oryza glaberrima ORGLA02G0046100 N 0.919
OGLUM06G25850 Oryza glumaepatula OGLUM06G25850 N 0.939
OGLUM02G04830 Oryza glumaepatula OGLUM02G04830 N 0.921
OGLUM12G20140 Oryza glumaepatula OGLUM12G20140 N 0.873
OGLUM08G06200 Oryza glumaepatula OGLUM08G06200 N 0.943
BGIOSGA023457 Oryza indica BGIOSGA023457 N 0.939
BGIOSGA027481 Oryza indica BGIOSGA027481 N 0.943
BGIOSGA007071 Oryza indica BGIOSGA007071 N 0.872
OLONG_010248 Oryza longistaminata OLONG_010248 N 0.939
OMERI02G05870 Oryza meridionalis OMERI02G05870 N 0.917
OMERI06G24740 Oryza meridionalis OMERI06G24740 N 0.938
ONIVA08G05790 Oryza nivara ONIVA08G05790 N 0.943
ONIVA02G35380 Oryza nivara ONIVA02G35380 N 0.939
ONIVA02G05190 Oryza nivara ONIVA02G05190 N 0.919
OPUNC08G05520 Oryza punctata OPUNC08G05520 N 0.939
OPUNC06G22270 Oryza punctata OPUNC06G22270 N 0.939
OPUNC02G04160 Oryza punctata OPUNC02G04160 N 0.926
ORUFI12G20640 Oryza rufipogon ORUFI12G20640 N 0.873
ORUFI08G06500 Oryza rufipogon ORUFI08G06500 N 0.943
ORUFI06G26420 Oryza rufipogon ORUFI06G26420 N 0.939
ORUFI02G05100 Oryza rufipogon ORUFI02G05100 N 0.919
OS06G0675600 Oryza sativa OS06G0675600 N 0.939
OS08G0200600 Oryza sativa OS08G0200600 N 0.943
OS12G0610600 Oryza sativa OS12G0610600 N 0.873
Pavir.J36955 Panicum virgatum Pavir.J36955 I 0.909
Pavir.Gb00488 Panicum virgatum Pavir.Gb00488 N 0.901
Pavir.Ga00022 Panicum virgatum Pavir.Ga00022 I 0.884
Pavir.Db00380 Panicum virgatum Pavir.Db00380 N 0.928
Si014180m.g Setaria italica Si014180m.g N 0.970
Si006975m.g Setaria italica Si006975m.g N 0.941
Si010680m.g Setaria italica Si010680m.g I 0.888
Sb06g028800 Sorghum bicolor Sb06g028800 N 0.896
Sb07g005610 Sorghum bicolor Sb07g005610 I 0.969
Sb10g027100 Sorghum bicolor Sb10g027100 N 0.928
Traes_7AL_BE3253C8F Triticum aestivum Traes_7AL_BE3253C8F N 0.936
Traes_7DL_BDD45DB24 Triticum aestivum Traes_7DL_BDD45DB24 I 0.953
TRIUR3_29250 Triticum urartu TRIUR3_29250 I 0.953
TRIUR3_03895 Triticum urartu TRIUR3_03895 N 0.936
GRMZM2G167018 Zea mays GRMZM2G167018 I 0.954
GRMZM2G156977 Zea mays GRMZM2G156977 N 0.899
GRMZM2G063522 Zea mays GRMZM2G063522 I 0.914