Pavir.Ha01768 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Ha01768 T298879_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ha01768.1.p NAC/NAM 22 154

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cla003087 Citrullus lanatus Cla003087 I 0.917
Cucsa.319840 Cucumis sativus Cucsa.319840 I 0.930
Si002586m.g Setaria italica Si002586m.g N 0.945
cassava13394.valid.m1 Manihot esculenta cassava13394.valid.m1 N 0.938
cassava14235.m1 Manihot esculenta cassava14235.m1 N 0.946
cassava15688.m1 Manihot esculenta cassava15688.m1 N 0.935
cassava32867.m1 Manihot esculenta cassava32867.m1 N 0.874
cassava3989.m1 Manihot esculenta cassava3989.m1 N 0.918
Cucsa.083530 Cucumis sativus Cucsa.083530 N 0.902
Cucsa.185760 Cucumis sativus Cucsa.185760 N 0.896
mgf020234m Mimulus guttatus mgf020234m N 0.902
mgf024293m Mimulus guttatus mgf024293m N 0.935
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N 0.920
Pm001403 Prunus mume Pm001403 N 0.953
Cla018691 Citrullus lanatus Cla018691 N 0.914
Cla008777 Citrullus lanatus Cla008777 N 0.895
Si025833m.g Setaria italica Si025833m.g N 0.984
Si026707m.g Setaria italica Si026707m.g N 0.991
Solyc09g010160.1 Solanum lycopersicum Solyc09g010160.1 N 0.927
Solyc11g068620.1 Solanum lycopersicum Solyc11g068620.1 N 0.956
TCM_041364 Theobroma cacao TCM_041364 N 0.905
TRAES3BF019300010CFD_g Triticum aestivum TRAES3BF019300010CFD_g N 0.901
Traes_5DL_43FC1B296 Triticum aestivum Traes_5DL_43FC1B296 N 0.944
TRIUR3_33275 Triticum urartu TRIUR3_33275 N 0.924
TRIUR3_34272 Triticum urartu TRIUR3_34272 N 0.893
Ca_00818 Cicer arietinum Ca_00818 N 0.902
Ca_15160 Cicer arietinum Ca_15160 N 0.914
Ciclev10029032m.g Citrus clementina Ciclev10029032m.g N 0.953
Eucgr.A02635 Eucalyptus grandis Eucgr.A02635 N 0.919
MDP0000205938 Malus domestica MDP0000205938 N 0.952
MDP0000759504 Malus domestica MDP0000759504 N 0.956
orange1.1g023996m.g Citrus sinensis orange1.1g023996m.g N 0.952
Pavir.Bb01366 Panicum virgatum Pavir.Bb01366 N 0.985
Pavir.Ea03745 Panicum virgatum Pavir.Ea03745 N 0.952
Pavir.Hb01808 Panicum virgatum Pavir.Hb01808 N 0.990
Pavir.J02276 Panicum virgatum Pavir.J02276 N 0.935
Pavir.J13106 Panicum virgatum Pavir.J13106 N 0.991
SapurV1A.0630s0010 Salix purpurea SapurV1A.0630s0010 N 0.946
SapurV1A.0974s0010 Salix purpurea SapurV1A.0974s0010 N 0.950
PK27925.1 Cannabis sativa PK27925.1 N 0.938
PK29014.1 Cannabis sativa PK29014.1 N 0.918
MDP0000130797 Malus domestica MDP0000130797 N 0.956
Lus10029410.g Linum usitatissimum Lus10029410.g N 0.935
Eucgr.A02636 Eucalyptus grandis Eucgr.A02636 N 0.926
Eucgr.A02637 Eucalyptus grandis Eucgr.A02637 N 0.875
Eucgr.A02638 Eucalyptus grandis Eucgr.A02638 N 0.918
Eucgr.A02639 Eucalyptus grandis Eucgr.A02639 N 0.922
Eucgr.J00517 Eucalyptus grandis Eucgr.J00517 N 0.933
Eucgr.J00518 Eucalyptus grandis Eucgr.J00518 N 0.920
Eucgr.J00519 Eucalyptus grandis Eucgr.J00519 N 0.874
Eucgr.J00520 Eucalyptus grandis Eucgr.J00520 N 0.931
evm.TU.supercontig_104.98 Carica papaya evm.TU.supercontig_104.98 N 0.896
evm.TU.supercontig_195.14 Carica papaya evm.TU.supercontig_195.14 N 0.949
Gorai.001G122800 Gossypium raimondii Gorai.001G122800 N 0.911
Gorai.002G238300 Gossypium raimondii Gorai.002G238300 N 0.892
LjSGA_014778.2 Lotus japonicus LjSGA_014778.2 N 0.924
AMTR_s00040p00117430 Amborella trichopoda AMTR_s00040p00117430 N 0.924
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N 0.940
GSMUA_Achr8G01410_001 Musa acuminata GSMUA_Achr8G01410_001 N 0.883
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N 0.911
LPERR01G32790 Leersia perrieri LPERR01G32790 N 0.883
LPERR11G02950 Leersia perrieri LPERR11G02950 N 0.945
LPERR12G03220 Leersia perrieri LPERR12G03220 N 0.949
MLOC_60153 Hordeum vulgare MLOC_60153 N 0.942
MTR_2g086690 Medicago truncatula MTR_2g086690 N 0.879
MTR_4g052620 Medicago truncatula MTR_4g052620 N 0.906
MTR_7g105170 Medicago truncatula MTR_7g105170 N 0.920
OB11G12830 Oryza brachyantha OB11G12830 N 0.975
OB12G13350 Oryza brachyantha OB12G13350 N 0.964
GSMUA_Achr10G04720_001 Musa acuminata GSMUA_Achr10G04720_001 N 0.927
GRMZM5G832473 Zea mays GRMZM5G832473 N 0.932
BGIOSGA004848 Oryza indica BGIOSGA004848 N 0.886
BGIOSGA034823 Oryza indica BGIOSGA034823 N 0.968
BGIOSGA037019 Oryza indica BGIOSGA037019 N 0.957
BRADI2G55780 Brachypodium distachyon BRADI2G55780 N 0.896
F775_13455 Aegilops tauschii F775_13455 N 0.944
F775_19761 Aegilops tauschii F775_19761 N 0.904
GLYMA03G35570 Glycine max GLYMA03G35570 N 0.955
GLYMA12G09670 Glycine max GLYMA12G09670 N 0.894
GLYMA12G31150 Glycine max GLYMA12G31150 N 0.905
GLYMA13G39160 Glycine max GLYMA13G39160 N 0.903
GLYMA19G38211 Glycine max GLYMA19G38211 N 0.957
GRMZM2G439903 Zea mays GRMZM2G439903 N 0.985
OBART01G38190 Oryza barthii OBART01G38190 N 0.886
OBART11G03530 Oryza barthii OBART11G03530 N 0.968
ORGLA12G0033100 Oryza glaberrima ORGLA12G0033100 N 0.957
ORGLA12G0180300 Oryza glaberrima ORGLA12G0180300 N 0.968
ORUFI01G41540 Oryza rufipogon ORUFI01G41540 N 0.886
ORUFI11G03420 Oryza rufipogon ORUFI11G03420 N 0.969
OS01G0862800 Oryza sativa OS01G0862800 N 0.886
OS11G0154500 Oryza sativa OS11G0154500 N 0.969
OS12G0156100 Oryza sativa OS12G0156100 N 0.957
PGSC0003DMG400026332 Solanum tuberosum PGSC0003DMG400026332 N 0.952
POPTR_0009s02430 Populus trichocarpa POPTR_0009s02430 N 0.920
POPTR_0016s07690 Populus trichocarpa POPTR_0016s07690 N 0.949
PRUPE_ppa010337mg Prunus persica PRUPE_ppa010337mg N 0.953
Sb03g040720 Sorghum bicolor Sb03g040720 N 0.875
ORGLA11G0032800 Oryza glaberrima ORGLA11G0032800 N 0.968
ORGLA01G0320200 Oryza glaberrima ORGLA01G0320200 N 0.886
OBART12G03440 Oryza barthii OBART12G03440 N 0.957
OGLUM01G42380 Oryza glumaepatula OGLUM01G42380 N 0.886
OGLUM11G03170 Oryza glumaepatula OGLUM11G03170 N 0.968
OGLUM12G04110 Oryza glumaepatula OGLUM12G04110 N 0.957
OMERI01G35090 Oryza meridionalis OMERI01G35090 N 0.886
OMERI11G03230 Oryza meridionalis OMERI11G03230 N 0.968
ONIVA01G42870 Oryza nivara ONIVA01G42870 N 0.886
ONIVA11G03690 Oryza nivara ONIVA11G03690 N 0.968
ONIVA12G03060 Oryza nivara ONIVA12G03060 N 0.957
OPUNC01G36980 Oryza punctata OPUNC01G36980 N 0.884
OPUNC11G03220 Oryza punctata OPUNC11G03220 N 0.968
OPUNC12G03240 Oryza punctata OPUNC12G03240 N 0.959
Sb05g003400 Sorghum bicolor Sb05g003400 N 0.983