Thhalv10027479m.g (Eutrema salsugineum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Thhalv10027479m.g T299306_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC92
M00979_2.00 		Arabidopsis thaliana
NNDYACGBHA
TDVCGTRHNN		 PBM
Lindemose et al.(2014)
ANAC092 		0.916 0.930
NAC92
M00730_2.00 		Arabidopsis thaliana
DYACGNHAN
NTDNCGTRH		 PBM
Chang et al.(2013)
pTH7335 		0.916 0.930
NAC92
M07234_2.00 		Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY
RTWRCKTGHDNNDCAMGNWA		 Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a 		0.916 0.930
NAC92
M07235_2.00 		Arabidopsis thaliana
WRCKTGTNNNDCAMG
CKTGHNNNACAMGYW		 Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a 		0.916 0.930
NAC59
M11080_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANAC059_01 		0.900 0.895
NAC100
M02375_2.00 		Arabidopsis thaliana
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH7239 		0.872 0.842
NAC079
M02373_2.00 		Arabidopsis thaliana
TTGCGTRY
RYACGCAA		 PBM
Weirauch et al.(2014)
pTH7399 		0.872 0.825
NAC079
M07228_2.00 		Arabidopsis thaliana
CBWNHNNHACACGYWA
TWRCGTGTDNNDNWVG		 Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a 		0.872 0.825
NAC079
M07229_2.00 		Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH
DTWRCKTGWDNNDBAMGNWAN		 Dap-seq
OMalley et al.(2016)
ANAC079_col 		0.872 0.825
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10027479m NAC/NAM 12 136

Links

Other NAC/NAM family TFs
Other Eutrema salsugineum TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra028435 Brassica rapa Bra028435 I 0.918
Thhalv10027874m.g Eutrema salsugineum Thhalv10027874m.g I 0.918
Bra025658 Brassica rapa Bra025658 I 0.916
Bo9g008770 Brassica oleracea Bo9g008770 I 0.916
Bostr.10058s0039 Boechera stricta Bostr.10058s0039 I 0.916
Bo00578s090 Brassica oleracea Bo00578s090 I 0.916
ATNAC2 Arabidopsis lyrata fgenesh2_kg.7__3461__AT5G39610.1 I 0.916
NAC92 Arabidopsis thaliana AT5G39610 D 0.916
Bo6g062160 Brassica oleracea Bo6g062160 I 0.910
ATNAC3 Arabidopsis lyrata fgenesh2_kg.5__665__AT3G29035.1 I 0.907
Thhalv10004583m.g Eutrema salsugineum Thhalv10004583m.g I 0.901
NAC59 Arabidopsis thaliana AT3G29035 D 0.900
Carubv10005201m.g Capsella rubella Carubv10005201m.g I 0.895
Bra036223 Brassica rapa Bra036223 I 0.888
GLYMA06G21020 Glycine max GLYMA06G21020 I 0.888
Cagra.6981s0001 Capsella grandiflora Cagra.6981s0001 I 0.887
GLYMA04G33270 Glycine max GLYMA04G33270 I 0.886
GLYMA17G10970 Glycine max GLYMA17G10970 I 0.883
GLYMA05G00930 Glycine max GLYMA05G00930 I 0.883
Bo7g087220 Brassica oleracea Bo7g087220 I 0.883
Bra025374 Brassica rapa Bra025374 I 0.882
Eucgr.B00529 Eucalyptus grandis Eucgr.B00529 I 0.882
orange1.1g018950m.g Citrus sinensis orange1.1g018950m.g I 0.882
Ciclev10012093m.g Citrus clementina Ciclev10012093m.g I 0.882
PK13860.1 Cannabis sativa PK13860.1 I 0.880
chr4.CM0087.800.nd Lotus japonicus chr4.CM0087.800.nd I 0.878
PGSC0003DMG400033047 Solanum tuberosum PGSC0003DMG400033047 I 0.878
Solyc06g069710.2 Solanum lycopersicum Solyc06g069710.2 I 0.878
Cla017258 Citrullus lanatus Cla017258 I 0.876
Bra028685 Brassica rapa Bra028685 I 0.875
Gorai.008G194400 Gossypium raimondii Gorai.008G194400 I 0.875
Gorai.007G079900 Gossypium raimondii Gorai.007G079900 I 0.875
Bostr.13129s0198 Boechera stricta Bostr.13129s0198 I 0.874
PRUPE_ppa007883mg Prunus persica PRUPE_ppa007883mg I 0.873
TCM_014073 Theobroma cacao TCM_014073 I 0.873
NAC100 Arabidopsis thaliana AT5G61430 D 0.872
NAC079 Arabidopsis thaliana AT5G07680 D 0.872
Thhalv10014081m.g Eutrema salsugineum Thhalv10014081m.g I 0.872
VIT_17s0000g06400 Vitis vinifera VIT_17s0000g06400 I 0.872
Carubv10001372m.g Capsella rubella Carubv10001372m.g I 0.872
Cagra.2925s0018 Capsella grandiflora Cagra.2925s0018 I 0.872
evm.TU.supercontig_111.22 Carica papaya evm.TU.supercontig_111.22 I 0.871