CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1504s0067
(
Capsella grandiflora
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
Cagra.1504s0067
T300957_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1504s0067.1.p
NFX
198
215
CGHCCLLLCHPGPCASCP
Cagra.1504s0067.1.p
NFX
233
268
CGHKHFSCGDVCDKVLDCNIHKCREICHDGECPPCR
Cagra.1504s0067.1.p
NFX
303
321
CGKHVCERGCHSGECGLCP
Cagra.1504s0067.1.p
NFX
357
376
CGYHRCPERCHRGPCLETCR
Cagra.1504s0067.1.p
NFX
410
428
CARHACRRRCCDGECPPCS
Cagra.1504s0067.1.p
NFX
431
455
CGKRLRCRNHKCQSPCHQGPCAPCP
Cagra.1504s0067.1.p
NFX
502
514
PHKCHYGACPPCR
Cagra.1504s0067.1.p
NFX
523
534
CGHKCTQRCHGP
Cagra.1504s0067.1.p
NFX
605
616
CGNHYCSFTCHP
Cagra.1504s0067.1.p
NFX
646
663
CQHPCPRRCHPGDCPPCK
Cagra.1504s0067.1.p
NFX
709
729
CTHLCPEICHPGQCPLPEKCM
Links
Other
NFX
family TFs
Other
Capsella grandiflora
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy