CpipJ_CPIJ017334 (Culex pipiens)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 CpipJ_CPIJ017334 T301170_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GA30480
M02409_2.00
Drosophila pseudoobscura
RAGATCAM

KTGATCTY
PBM
Weirauch et al.(2014)
pTH5877
0.755 0.950
Hr51
M06432_2.00
Drosophila melanogaster
AMRDATCARARGW

WCYTYTGATHYKT
B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012
0.755 0.950
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ017334-RA Nuclear receptor 137 176

Links

Other Nuclear receptor family TFs
Other Culex pipiens TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_18084 Aegilops tauschii F775_18084 N 0.000
BRADI2G23520 Brachypodium distachyon BRADI2G23520 N 0.000
MLOC_60455 Hordeum vulgare MLOC_60455 N 0.000
OBART05G18950 Oryza barthii OBART05G18950 N 0.000
OB05G26550 Oryza brachyantha OB05G26550 N 0.000
ONIVA05G19800 Oryza nivara ONIVA05G19800 N 0.000
OPUNC05G16540 Oryza punctata OPUNC05G16540 N 0.000
Pavir.J06547 Panicum virgatum Pavir.J06547 N 0.000
Pavir.J15729 Panicum virgatum Pavir.J15729 N 0.000
Si023133m.g Setaria italica Si023133m.g N 0.000
Sb09g022280 Sorghum bicolor Sb09g022280 N 0.000
Traes_1AL_81A6723C9 Triticum aestivum Traes_1AL_81A6723C9 N 0.000
Traes_1DL_A2C6C77E8 Triticum aestivum Traes_1DL_A2C6C77E8 N 0.000
TRIUR3_14889 Triticum urartu TRIUR3_14889 N 0.000
GRMZM2G061906 Zea mays GRMZM2G061906 N 0.000