CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG07379
(
Caenorhabditis briggsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBG07379
T301494_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG07379
Nuclear receptor
69
138
PECQVCSAPADGLHYGAISCRSCNAFFRRTVVEKAEYRCKHTNSCVIDPDGRCACRSCRFTKCLEAGMKV
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis briggsae
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nhr-71
Caenorhabditis elegans
WBGene00003661
N
0.995
CBN02605
Caenorhabditis brenneri
CBN02605
N
0.994
CRE22320
Caenorhabditis remanei
CRE22320
N
0.994
CJA04524
Caenorhabditis japonica
CJA04524
N
0.994
GPLIN_000607300
Globodera pallida
GPLIN_000607300
N
0.933
GPLIN_000663400
Globodera pallida
GPLIN_000663400
N
0.933
RSKR_0000313900
Rhabditophanes kr3021
RSKR_0000313900
N
0.906
scaffold429-EXSNAP2012.6
Pristionchus exspectatus
scaffold429-EXSNAP2012.6
N
0.896
L596_g18692
Steinernema carpocapsae
L596_g18692
N
0.864
L892_g2121
Steinernema scapterisci
L892_g2121
N
0.864
L893_g20500
Steinernema glaseri
L893_g20500
N
0.860
BXY_1188800
Bursaphelenchus xylophilus
BXY_1188800
N
0.825
scaffold50-EXSNAP2012.1
Pristionchus exspectatus
scaffold50-EXSNAP2012.1
N
0.772
L596_g18686
Steinernema carpocapsae
L596_g18686
N
0.757
LOAG_12834
Loa loa
LOAG_12834
N
0.756