CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE09182
(
Caenorhabditis remanei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CRE09182
T302135_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG01240
M02390_2.00
Caenorhabditis briggsae
BTGTGWCB
VGWCACAV
PBM
Weirauch et al.(2014)
pTH6003
0.890
0.768
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE09182
Nuclear receptor
9
78
GPCEICGQQTSGRHFGVMSCRACAAFFRRAASWSKRRIECPKGNCTIFEDGKFQCKRCRLKRCFDVGMDA
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis remanei
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG01240
Caenorhabditis briggsae
CBG01240
D
0.890
nhr-128
Caenorhabditis elegans
WBGene00003718
N
0.841
nhr-134
Caenorhabditis elegans
WBGene00003724
I
0.827
nhr-103
Caenorhabditis elegans
WBGene00003693
N
0.793
nhr-18
Caenorhabditis elegans
WBGene00003617
I
0.766