CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NR5A2
(
Pteropus vampyrus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
ENSPVAG00000004687
T304649_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Nr5a2
M00816_2.00
Mus musculus
VAAGGTCR
YGACCTTB
PBM
Weirauch et al.(2013)
pTH3468
0.425
1.000
ftz-f1
M02407_2.00
Drosophila melanogaster
RRGGTCAH
DTGACCYY
PBM
Weirauch et al.(2014)
pTH5709
0.425
1.000
NR5A1
M05613_2.00
Homo sapiens
NNCAAGGYCRN
NYGRCCTTGNN
SELEX
Yin et al.(2017)
NR5A1_FL_HT-SELEX
0.425
1.000
NR5A2
M05589_2.00
Homo sapiens
YCAAGGYCRYGRCCTTSR
YSAAGGYCRYGRCCTTGR
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_1
0.425
1.000
NR5A2
M05590_2.00
Homo sapiens
NYCAAGGTCAH
DTGACCTTGRN
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_2
0.425
1.000
NR5A2
M05591_2.00
Homo sapiens
YGRCCTTSVNYSAAGGYCR
YGRCCTTSRNBSAAGGYCR
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_3
0.425
1.000
ftz-f1
M06417_2.00
Drosophila melanogaster
MMRKYYSAAGGWCRCYGM
KCRGYGWCCTTSRRMYKK
B1H
Zhu et al.(2011)
ftz-f1_FlyReg_FBgn0001078
0.425
1.000
ftz-f1
M06418_2.00
Drosophila melanogaster
AAGGTCA
TGACCTT
B1H
Zhu et al.(2011)
ftz-f1_SANGER_5_FBgn0001078
0.425
1.000
Nr5a2
M08158_2.00
Mus musculus
VRDBTCAAGGYCANN
NNTGRCCTTGAVHYB
ChIP-seq
Mathelier et al.(2014)
MA0505.1
0.425
1.000
NR5A2
M09271_2.00
Homo sapiens
NBYCAAGGYCA
TGRCCTTGRVN
Misc
Kulakovskiy et al.(2013)
NR5A2_HUMAN.H11MO.0.B
0.425
1.000
Nr5a2
M09320_2.00
Mus musculus
NBYCAAGGYCA
TGRCCTTGRVN
Misc
Kulakovskiy et al.(2013)
NR5A2_MOUSE.H11MO.0.A
0.425
1.000
Nr5a1
M09322_2.00
Mus musculus
NBYCAAGGYCA
TGRCCTTGRVN
Misc
Kulakovskiy et al.(2013)
STF1_MOUSE.H11MO.0.B
0.425
1.000
Nr5a2
M09616_2.00
Mus musculus
BYCAAGGYCA
TGRCCTTGRV
Misc
Heinz et al.(2010)
Pancreas-LRH1_GSE34295
0.425
1.000
Nr5a2
M09615_2.00
Mus musculus
BYCAAGGYCA
TGRCCTTGRV
Misc
Heinz et al.(2010)
mES-Nr5a2_GSE19019
0.425
1.000
NR5A2
M11126_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRH1_Q5_01
0.425
1.000
NR5A2
M11127_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRH1_Q5
0.425
1.000
NR5A2
M11128_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRH1_Q6
0.425
1.000
NR5A1
M11142_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SF1_Q5_01
0.425
1.000
NR5A1
M11143_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SF1_Q5
0.425
1.000
NR5A1
M11144_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SF1_Q6_01
0.425
1.000
NR5A1
M11145_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SF1_Q6
0.425
1.000
NR5A1
M05614_2.00
Homo sapiens
NNSAAGGHCRN
NYGDCCTTSNN
SELEX
Yin et al.(2017)
NR5A1_FL_Methyl-HT-SELEX
0.425
1.000
NR5A2
M05592_2.00
Homo sapiens
YCAAGGYCRYGACCTTSR
YSAAGGTCRYGRCCTTGR
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_1
0.425
1.000
NR5A2
M05593_2.00
Homo sapiens
NYCAAGGTCRH
DYGACCTTGRN
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_2
0.425
1.000
NR5A2
M05594_2.00
Homo sapiens
YGRCCTTSVNBSAAGGYCR
YGRCCTTSVNBSAAGGYCR
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_3
0.425
1.000
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000004438
Nuclear receptor
84
113
ELCPVCGDKVSGYHYGLLTCESCKXXXXXX
Links
Other
Nuclear receptor
family TFs
Other
Pteropus vampyrus
TFs
145 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy