fgenesh2_pg.scaffold_569000002 (Branchiostoma floridae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 fgenesh2_pg.scaffold_569000002 T306997_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Rxra
M00181_2.00
Mus musculus
NRRGGTCANN

NNTGACCYYN
PBM
Badis et al.(2009)
Rxra_1035
0.930 0.614
RXRA
M03408_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRA_1
0.930 0.614
RXRA
M03409_2.00
Homo sapiens
RRGGTCATGACCYY

RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRA_2
0.930 0.614
RXRA
M03410_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRA_3
0.930 0.614
RXRA
M03411_2.00
Homo sapiens
RRGGTCATGACCYY

RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRA_4
0.930 0.614
Rxra
M03421_2.00
Mus musculus
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
Rxra_1
0.930 0.614
Rxra
M03422_2.00
Mus musculus
RGGTCATGACCY

RGGTCATGACCY
SELEX
Jolma et al.(2013)
Rxra_2
0.930 0.614
RXRA
M05671_2.00
Homo sapiens
RRGGTCAAAGGTCAN

NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX
0.930 0.614
RXRA
M05882_2.00
Homo sapiens
VRGKTBAAAGGTYRH

DYRACCTTTVAMCYB
SMiLE-seq
Isakova et al.(2017)
RXRa
0.930 0.614
RXRA
M07993_2.00
Homo sapiens
NRRGGTCA

TGACCYYN
ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha
0.930 0.614
RXRA
M07994_2.00
Homo sapiens
DDNNMRRGGTCANDN

NHNTGACCYYKNNHH
ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha
0.930 0.614
RXRA
M09294_2.00
Homo sapiens
VDDDNDNNVRRRGGKCAVDV

BHBTGMCCYYYBNNHNHHHB
Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A
0.930 0.614
Rxra
M09306_2.00
Mus musculus
DDVNNNNNRAGKTCAAGGYCA

TGRCCTTGAMCTYNNNNNBHH
Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A
0.930 0.614
RXRA
M11182_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RXRA_07
0.930 0.614
RXRA
M05672_2.00
Homo sapiens
RRGGTCAAAGGTCAH

DTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX
0.930 0.614
Rxrb
M02402_2.00
Mus musculus
VRGGTCAH

DTGACCYB
PBM
Weirauch et al.(2014)
pTH2861
0.928 0.586
RXRB
M03415_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRB_1
0.928 0.586
Rxrb
M03435_2.00
Mus musculus
GRGGTCAAAGGTCA

TGACCTTTGACCYC
SELEX
Jolma et al.(2013)
Rxrb_1
0.928 0.586
RXRB
M05681_2.00
Homo sapiens
RRGGTCAAAGGTCAN

NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_1
0.928 0.586
RXRB
M05682_2.00
Homo sapiens
RRGGTCAYGACCYY

RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_2
0.928 0.586
RXRB
M09297_2.00
Homo sapiens
DSAGGTCASD

HSTGACCTSH
Misc
Kulakovskiy et al.(2013)
RXRB_HUMAN.H11MO.0.C
0.928 0.586
Rxrb
M09330_2.00
Mus musculus
DSAGGTCASD

HSTGACCTSH
Misc
Kulakovskiy et al.(2013)
RXRB_MOUSE.H11MO.0.C
0.928 0.586
RXRB
M05683_2.00
Homo sapiens
RRGGTCAAAGGTCRN

NYGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_1
0.928 0.586
RXRB
M05684_2.00
Homo sapiens
RRGGTCRYGACCYY

RRGGTCRYGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_2
0.928 0.586
usp
M03934_2.00
Drosophila melanogaster
ARRGGTCAAAGGTCA

TGACCTTTGACCYYT
SELEX
Nitta et al.(2015)
usp_1
0.927 0.629
usp
M06426_2.00
Drosophila melanogaster
HRRGGTCAH

DTGACCYYD
B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964
0.927 0.629
usp
M02709_2.00
Drosophila melanogaster
GGGGTCACSN

NSGTGACCCC
SELEX
Mathelier et al.(2014)
MA0016.1
0.927 0.629
usp
M09689_2.00
Drosophila melanogaster
KRGGTCACG

CGTGACCYM
Misc
Kulakovskiy et al.(2009)
usp
0.927 0.629
usp
M11191_2.00
Drosophila melanogaster
GRGGTCAYS

SRTGACCYC
Transfac
Matys et al.(2006)
I$CF1_01
0.927 0.629
usp
M11192_2.00
Drosophila melanogaster
GGGGTCAYS

SRTGACCCC
Transfac
Matys et al.(2006)
I$CF1_02
0.927 0.629
Rxrg
M02400_2.00
Mus musculus
VRGGTCAN

NTGACCYB
PBM
Weirauch et al.(2014)
pTH2880
0.926 0.600
RXRG
M03375_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRG_1
0.926 0.600
RXRG
M03376_2.00
Homo sapiens
RRGGTCATGACCYY

RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRG_2
0.926 0.600
RXRG
M03377_2.00
Homo sapiens
GRGGTCAAAGGTCA

TGACCTTTGACCYC
SELEX
Jolma et al.(2013)
RXRG_3
0.926 0.600
RXRG
M03378_2.00
Homo sapiens
NRGGTCATGACCYC

GRGGTCATGACCYN
SELEX
Jolma et al.(2013)
RXRG_4
0.926 0.600
RXRG
M02746_2.00
Homo sapiens
GGTCAAAGGTCA

TGACCTTTGACC
SELEX
Jolma et al.(2010)
RXRG_dimer
0.926 0.600
RXRG
M05615_2.00
Homo sapiens
VRGGTCAAAGGTCAN

NTGACCTTTGACCYB
SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1
0.926 0.600
RXRG
M05616_2.00
Homo sapiens
RRGGTCAYGACCYY

RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2
0.926 0.600
RXRG
M05879_2.00
Homo sapiens
RGGTBAARGGTBRND

HNYVACCYTTVACCY
SMiLE-seq
Isakova et al.(2017)
RXRg
0.926 0.600
RXRG
M09280_2.00
Homo sapiens
NGTCAAAGGTCAH

DTGACCTTTGACN
Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B
0.926 0.600
Rxrg
M09305_2.00
Mus musculus
VDDVDNSVNRAGKTCAAGGYCA

TGRCCTTGAMCTYNBSNHBHHB
Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B
0.926 0.600
RXRG
M05617_2.00
Homo sapiens
DRGGTBAARGGTBRN

NYVACCYTTVACCYH
SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1
0.926 0.600
RXRG
M05618_2.00
Homo sapiens
VRGGTCAYGACCYB

VRGGTCRTGACCYB
SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2
0.926 0.600
Hr78
M06430_2.00
Drosophila melanogaster
HVAGGTCA

TGACCTBD
B1H
Zhu et al.(2011)
Hr78_SANGER_5_FBgn0015239
0.901 0.571
Q95WG3_ACRMI
M02424_2.00
Acropora millepora
NRAGGTCAN

NTGACCTYN
PBM
Weirauch et al.(2014)
pTH6144
0.891 0.643
Nr2c1
M00812_2.00
Mus musculus
NRRGGTCANN

NNTGACCYYN
PBM
Weirauch et al.(2013)
pTH1284
0.875 0.557
Nr2c1
M02399_2.00
Mus musculus
RRGGTCAH

DTGACCYY
PBM
Weirauch et al.(2014)
pTH3466
0.875 0.557
NR2C1
M05597_2.00
Homo sapiens
NRGKKCRYGAMMYN

NRKKTCRYGMMCYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1
0.875 0.557
NR2C1
M05598_2.00
Homo sapiens
NRRGGTCAN

NTGACCYYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2
0.875 0.557
NR2C1
M09273_2.00
Homo sapiens
RBYVRVAGGTCAB

VTGACCTBYBRVY
Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C
0.875 0.557
Nr2c1
M09304_2.00
Mus musculus
RBYVRVAGGTCAB

VTGACCTBYBRVY
Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C
0.875 0.557
NR2C1
M05599_2.00
Homo sapiens
NRRGGTCAN

NTGACCYYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1
0.875 0.557
NR2C1
M05600_2.00
Homo sapiens
RRGGTCRYGACCYY

RRGGTCRYGACCYY
SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2
0.875 0.557
Nr2f6
M00811_2.00
Mus musculus
NRRGGTCANN

NNTGACCYYN
PBM
Weirauch et al.(2013)
pTH2193
0.874 0.514
Nr2f6
M03419_2.00
Mus musculus
RAGGTCAADAGGTCA

TGACCTHTTGACCTY
SELEX
Jolma et al.(2013)
Nr2f6_1
0.874 0.514
Nr2f6
M03420_2.00
Mus musculus
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
Nr2f6_2
0.874 0.514
O77476_BRUPA
M02422_2.00
Brugia pahangi
NRGGTCAN

NTGACCYN
PBM
Weirauch et al.(2014)
pTH6019
0.861 0.514
NR2C2
M03407_2.00
Homo sapiens
VRGGTCAAAGGTCA

TGACCTTTGACCYB
SELEX
Jolma et al.(2013)
NR2C2_1
0.845 0.571
NR2C2
M05669_2.00
Homo sapiens
NRGGTCRN

NYGACCYN
SELEX
Yin et al.(2017)
NR2C2_eDBD_HT-SELEX
0.845 0.571
NR2C2
M08156_2.00
Homo sapiens
NVRGGTCARAGGKCA

TGMCCTYTGACCYBN
ChIP-seq
Mathelier et al.(2014)
MA0504.1
0.845 0.571
NR2C2
M07990_2.00
Homo sapiens
WBYRCTTCCGGGKYV

BRMCCCGGAAGYRVW
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_TR4_UCD
0.845 0.571
NR2C2
M07991_2.00
Homo sapiens
DWBYRCTTCCGGGKY

RMCCCGGAAGYRVWH
ChIP-seq
Gerstein et al.(2012)
HepG2b_TR4_UCD
0.845 0.571
NR2C2
M07992_2.00
Homo sapiens
WBYRCTTCCGGGKYR

YRMCCCGGAAGYRVW
ChIP-seq
Gerstein et al.(2012)
K562b_TR4_UCD
0.845 0.571
NR2C2
M08221_2.00
Homo sapiens
DWBYDCTTCCGGGKY

RMCCCGGAAGHRVWH
ChIP-seq
Contrino et al.(2012)
Mv97
0.845 0.571
NR2C2
M08222_2.00
Homo sapiens
TCARAGGTCA

TGACCTYTGA
ChIP-seq
Contrino et al.(2012)
Mv98
0.845 0.571
NR2C2
M09292_2.00
Homo sapiens
RBTYMVRGGTCR

YGACCYBKRAVY
Misc
Kulakovskiy et al.(2013)
NR2C2_HUMAN.H11MO.0.B
0.845 0.571
Nr2c2
M09303_2.00
Mus musculus
RRGKSARAGGKCA

TGMCCTYTSMCYY
Misc
Kulakovskiy et al.(2013)
NR2C2_MOUSE.H11MO.0.A
0.845 0.571
NR2C2
M09611_2.00
Homo sapiens
RRGGTCARAGGTCA

TGACCTYTGACCYY
Misc
Heinz et al.(2010)
Hela-TR4_GSE24685
0.845 0.571
NR2C2
M11173_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR2C2_03
0.845 0.571
NR2C2
M11174_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR2C2_04
0.845 0.571
NR2C2
M11175_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_01
0.845 0.571
NR2C2
M11176_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_03
0.845 0.571
NR2C2
M11177_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q2_01
0.845 0.571
NR2C2
M11178_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q2
0.845 0.571
NR2C2
M11179_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q3
0.845 0.571
NR2C2
M05670_2.00
Homo sapiens
NRGGTCRN

NYGACCYN
SELEX
Yin et al.(2017)
NR2C2_eDBD_Methyl-HT-SELEX
0.845 0.571
RARG
M02397_2.00
Homo sapiens
VGGTCANN

NNTGACCB
PBM
Weirauch et al.(2014)
pTH5430
0.845 0.600
Rarg
M00810_2.00
Mus musculus
NNVGKTCANN

NNTGAMCBNN
PBM
Weirauch et al.(2013)
pTH4269
0.845 0.600
RARG
M03391_2.00
Homo sapiens
SRGGTCAAAAGGTCAVD

HBTGACCTTTTGACCYS
SELEX
Jolma et al.(2013)
RARG_1
0.845 0.600
RARG
M03392_2.00
Homo sapiens
RAGGTCAHVHWRAGGTCA

TGACCTYWDBDTGACCTY
SELEX
Jolma et al.(2013)
RARG_2
0.845 0.600
RARG
M03393_2.00
Homo sapiens
RRGGTCAHNNRAGGTCA

TGACCTYNNDTGACCYY
SELEX
Jolma et al.(2013)
RARG_3
0.845 0.600
RARG
M03394_2.00
Homo sapiens
GAGGTCAAAAGGTCAY

RTGACCTTTTGACCTC
SELEX
Jolma et al.(2013)
RARG_4
0.845 0.600
RARG
M03395_2.00
Homo sapiens
RAGGTCAABYARRGKTCA

TGAMCYYTRVTTGACCTY
SELEX
Jolma et al.(2013)
RARG_5
0.845 0.600
RARG
M03396_2.00
Homo sapiens
RAGGTCAHBNVRGGTCA

TGACCYBNVDTGACCTY
SELEX
Jolma et al.(2013)
RARG_6
0.845 0.600
Rarg
M03416_2.00
Mus musculus
RRGGTCAAAAGGTCAH

DTGACCTTTTGACCYY
SELEX
Jolma et al.(2013)
Rarg_1
0.845 0.600
Rarg
M03417_2.00
Mus musculus
RAGGTCAWVHAAAGGTCA

TGACCTTTDBWTGACCTY
SELEX
Jolma et al.(2013)
Rarg_2
0.845 0.600
Rarg
M03418_2.00
Mus musculus
AAGGTCAHSARAGGTCA

TGACCTYTSDTGACCTT
SELEX
Jolma et al.(2013)
Rarg_3
0.845 0.600
RARG
M05653_2.00
Homo sapiens
NRGGTCANV

BNTGACCYN
SELEX
Yin et al.(2017)
RARG_FL_HT-SELEX
0.845 0.600
RARG
M05649_2.00
Homo sapiens
DRGGTCAAAAGKTCAN

NTGAMCTTTTGACCYH
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_1
0.845 0.600
RARG
M05650_2.00
Homo sapiens
RAGGTCATGACCTH

DAGGTCATGACCTY
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_2
0.845 0.600
Rarg
M05885_2.00
Mus musculus
NRGGTCANDRGKKYA

TRMMCYHNTGACCYN
SMiLE-seq
Isakova et al.(2017)
RARg
0.845 0.600
RARG
M09289_2.00
Homo sapiens
RGGTCAVVVWGNMMNNDV

BHNNKKNCWBBBTGACCY
Misc
Kulakovskiy et al.(2013)
RARG_HUMAN.H11MO.0.B
0.845 0.600
Rarg
M09300_2.00
Mus musculus
RGGTCAVVVWGNMMNNDV

BHNNKKNCWBBBTGACCY
Misc
Kulakovskiy et al.(2013)
RARG_MOUSE.H11MO.0.C
0.845 0.600
Rarg
M09613_2.00
Mus musculus
RGKTCAAGGBCA

TGVCCTTGAMCY
Misc
Heinz et al.(2010)
ES-RARg_GSE30538
0.845 0.600
RARG
M11167_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RARG_Q3
0.845 0.600
RARG
M05654_2.00
Homo sapiens
NRGGTCRNV

BNYGACCYN
SELEX
Yin et al.(2017)
RARG_FL_Methyl-HT-SELEX
0.845 0.600
RARG
M05651_2.00
Homo sapiens
DRGGTCAARRGGTCRN

NYGACCYYTTGACCYH
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_1
0.845 0.600
RARG
M05652_2.00
Homo sapiens
DAGKTCRYGACCYY

RRGGTCRYGAMCTH
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_2
0.845 0.600
svp
M06423_2.00
Drosophila melanogaster
ARGGTCA

TGACCYK
B1H
Zhu et al.(2011)
svp_SANGER_5_FBgn0003651
0.841 0.486
Q969A9_BOMMO
M02410_2.00
Bombyx mori
VRGGTCDN

NHGACCYB
PBM
Weirauch et al.(2014)
pTH5516
0.839 0.486
Smp_105090
M02412_2.00
Schistosoma mansoni
RGGTCANN

NNTGACCY
PBM
Weirauch et al.(2014)
pTH6174
0.839 0.543
Eip78C
M06427_2.00
Drosophila melanogaster
RGGTCA

TGACCY
B1H
Zhu et al.(2011)
Eip78C_SANGER_5_FBgn0004865
0.827 0.529
CBG17178
M02392_2.00
Caenorhabditis briggsae
RAGGTCAH

DTGACCTY
PBM
Weirauch et al.(2014)
pTH6634
0.821 0.571
sex-1
M02416_2.00
Caenorhabditis elegans
RAGGTCAH

DTGACCTY
PBM
Weirauch et al.(2014)
pTH5667
0.820 0.571
PPARD
M05581_2.00
Homo sapiens
NRRGGTCAAAGGTCAN

NTGACCTTTGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_1
0.818 0.529
PPARD
M05582_2.00
Homo sapiens
HRRGGTCAYGACCYYD

HRRGGTCRTGACCYYD
SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_2
0.818 0.529
PPARD
M05583_2.00
Homo sapiens
NRRGGTCAAAGGTCRN

NYGACCTTTGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_1
0.818 0.529
PPARD
M05584_2.00
Homo sapiens
NRRGGTCRCGACCYYN

NRRGGTCGYGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_2
0.818 0.529
THRB
M03379_2.00
Homo sapiens
DTGACCTBATVAGGTCAN

NTGACCTBATVAGGTCAH
SELEX
Jolma et al.(2013)
THRB_1
0.818 0.600
THRB
M03380_2.00
Homo sapiens
DTGACCTBANTRAGGTCAH

DTGACCTYANTVAGGTCAH
SELEX
Jolma et al.(2013)
THRB_2
0.818 0.600
THRB
M03381_2.00
Homo sapiens
NTGWCCTYADNTRAGGTCAH

DTGACCTYANHTRAGGWCAN
SELEX
Jolma et al.(2013)
THRB_3
0.818 0.600
THRB
M05629_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_1
0.818 0.600
THRB
M05630_2.00
Homo sapiens
NRRGGTCAYGACCYYN

NRRGGTCRTGACCYYN
SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_2
0.818 0.600
THRB
M05633_2.00
Homo sapiens
NTGWCCTBRNYVAGGWCAN

NTGWCCTBRNYVAGGWCAN
SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_1
0.818 0.600
THRB
M05634_2.00
Homo sapiens
TRAGGTCABVYVAGGTCAH

DTGACCTBRBVTGACCTYA
SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_2
0.818 0.600
THRB
M09285_2.00
Homo sapiens
VRVSYVABVKSAGGWCA

TGWCCTSMBVTBRSBYB
Misc
Kulakovskiy et al.(2013)
THB_HUMAN.H11MO.0.C
0.818 0.600
THRB
M11150_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$T3RBETA_Q6_01
0.818 0.600
THRB
M05631_2.00
Homo sapiens
NRGGTYRDRGGKYRN

NYRMCCYHYRACCYN
SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_1
0.818 0.600
THRB
M05632_2.00
Homo sapiens
NNRGGTCAYGACCYBN

NVRGGTCRTGACCYNN
SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_2
0.818 0.600
THRB
M05635_2.00
Homo sapiens
NTGWCCTBRNYVAGGWCAN

NTGWCCTBRNYVAGGWCAN
SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_1
0.818 0.600
THRB
M05636_2.00
Homo sapiens
YRAGGWCAYGYRAGGWCAH

DTGWCCTYRCRTGWCCTYR
SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_2
0.818 0.600
Rara
M00185_2.00
Mus musculus
NRGGTCAN

NTGACCYN
PBM
Badis et al.(2009)
Rara_1051
0.813 0.586
Rara
M03432_2.00
Mus musculus
AAAGGTCAHBVRAGGTCA

TGACCTYBVDTGACCTTT
SELEX
Jolma et al.(2013)
Rara_1
0.813 0.586
Rara
M03433_2.00
Mus musculus
AGGTCAHNHAAAGGTCA

TGACCTTTDNDTGACCT
SELEX
Jolma et al.(2013)
Rara_2
0.813 0.586
Rara
M03434_2.00
Mus musculus
RAGGTCAAAAGGTCA

TGACCTTTTGACCTY
SELEX
Jolma et al.(2013)
Rara_3
0.813 0.586
Rara
M09329_2.00
Mus musculus
RGRTCRDRAGKTCAAGGTCA

TGACCTTGAMCTYHYGAYCY
Misc
Kulakovskiy et al.(2013)
RARA_MOUSE.H11MO.0.A
0.813 0.586
Rarb
M02401_2.00
Mus musculus
NRRGGTCAHN

NDTGACCYYN
PBM
Weirauch et al.(2014)
pTH2804
0.813 0.571
RARA
M03369_2.00
Homo sapiens
RRAGGTCAWBWRRGGTCA

TGACCYYWVWTGACCTYY
SELEX
Jolma et al.(2013)
RARA_1
0.813 0.571
RARA
M03370_2.00
Homo sapiens
RAGGTCAAAAGGTCAWKB

VMWTGACCTTTTGACCTY
SELEX
Jolma et al.(2013)
RARA_2
0.813 0.571
RARA
M03371_2.00
Homo sapiens
AGGTCAHNYWRAGGTCA

TGACCTYWRNDTGACCT
SELEX
Jolma et al.(2013)
RARA_3
0.813 0.571
RARA
M03372_2.00
Homo sapiens
ARGGTCAAAAGGTCA

TGACCTTTTGACCYT
SELEX
Jolma et al.(2013)
RARA_4
0.813 0.571
RARA
M03373_2.00
Homo sapiens
WRRGGTCAHSHRRGGTCA

TGACCYYDSDTGACCYYW
SELEX
Jolma et al.(2013)
RARA_5
0.813 0.571
RARA
M03374_2.00
Homo sapiens
AGGTCAWNNARAGGTCA

TGACCTYTNNWTGACCT
SELEX
Jolma et al.(2013)
RARA_6
0.813 0.571
RARB
M03355_2.00
Homo sapiens
AAAGGTCAARAGGTCA

TGACCTYTTGACCTTT
SELEX
Jolma et al.(2013)
RARB_1
0.813 0.571
Rarb
M03423_2.00
Mus musculus
WAAGGTCAAAAGGTCA

TGACCTTTTGACCTTW
SELEX
Jolma et al.(2013)
Rarb_1
0.813 0.571
Rarb
M03424_2.00
Mus musculus
RRAGGTCANBWRAGGTCA

TGACCTYWVNTGACCTYY
SELEX
Jolma et al.(2013)
Rarb_2
0.813 0.571
Rarb
M03425_2.00
Mus musculus
AGGTCAHVBWRAGGTCA

TGACCTYWVBDTGACCT
SELEX
Jolma et al.(2013)
Rarb_3
0.813 0.571
RARA
M05607_2.00
Homo sapiens
NVGGKCANNRGGKCAN

NTGMCCYNNTGMCCBN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_1
0.813 0.571
RARA
M05608_2.00
Homo sapiens
NVGGKCAYGNCCBN

NVGGNCRTGMCCBN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_2
0.813 0.571
RARA
M05609_2.00
Homo sapiens
NRRGGTCANV

BNTGACCYYN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_3
0.813 0.571
RARB
M05563_2.00
Homo sapiens
NHAAGGTCAN

NTGACCTTDN
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_1
0.813 0.571
RARB
M05564_2.00
Homo sapiens
RRGGTCAARRGGTCAN

NTGACCYYTTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_2
0.813 0.571
RARB
M05565_2.00
Homo sapiens
DAGGTCAYGACCYY

RRGGTCRTGACCTH
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_3
0.813 0.571
RARA
M05878_2.00
Homo sapiens
RAGGTCA

TGACCTY
SMiLE-seq
Isakova et al.(2017)
RARa
0.813 0.571
RARA
M09277_2.00
Homo sapiens
RRRDVDBSNDRAGKTCARGG

CCYTGAMCTYHNSVHBHYYY
Misc
Kulakovskiy et al.(2013)
RARA_HUMAN.H11MO.0.A
0.813 0.571
RARA
M11137_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR1B1_Q6
0.813 0.571
RARB
M11094_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR1B2_Q6
0.813 0.571
RARA
M05610_2.00
Homo sapiens
DRGGKCRNDRGGTCRN

NYGACCYHNYGMCCYH
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_1
0.813 0.571
RARA
M05611_2.00
Homo sapiens
NVGGTCAYGMCCYN

NRGGKCRTGACCBN
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_2
0.813 0.571
RARA
M05612_2.00
Homo sapiens
NRAGGTCANN

NNTGACCTYN
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_3
0.813 0.571
RARB
M05566_2.00
Homo sapiens
NHRAGGTCAH

DTGACCTYDN
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_1
0.813 0.571
RARB
M05567_2.00
Homo sapiens
RRGGTCAHRRGGTCAN

NTGACCYYDTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_2
0.813 0.571
RARB
M05568_2.00
Homo sapiens
RRGGTCAYGACCYY

RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_3
0.813 0.571
NR2F6
M02396_2.00
Homo sapiens
NNRGGTCR

YGACCYNN
PBM
Weirauch et al.(2014)
pTH6747
0.805 0.500
NR2F6
M03386_2.00
Homo sapiens
RRGGTCAAAAGGTCA

TGACCTTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F6_1
0.805 0.500
NR2F6
M03387_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F6_2
0.805 0.500
NR2F6
M03388_2.00
Homo sapiens
NRGGTCAAAGGTCA

TGACCTTTGACCYN
SELEX
Jolma et al.(2013)
NR2F6_3
0.805 0.500
NR2F6
M05641_2.00
Homo sapiens
RRGGTCAAAGGTCAN

NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_1
0.805 0.500
NR2F6
M05642_2.00
Homo sapiens
RAGGTCANTGACCTY

RAGGTCANTGACCTY
SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_2
0.805 0.500
NR2F6
M05645_2.00
Homo sapiens
NRGGTCARAGGTCRN

NYGACCTYTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_1
0.805 0.500
NR2F6
M05646_2.00
Homo sapiens
NRGGTCANYGACCYY

RRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_2
0.805 0.500
NR2F6
M11153_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EAR2_Q2
0.805 0.500
NR2F6
M11154_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EAR2_Q4
0.805 0.500
NR2F6
M05643_2.00
Homo sapiens
RRGGTCAAAGGTCRN

NYGACCTTTGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_1
0.805 0.500
NR2F6
M05644_2.00
Homo sapiens
RRGGTCRNYGACCYY

RRGGTCRNYGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_2
0.805 0.500
NR2F6
M05647_2.00
Homo sapiens
NRGGTYADRGGKBRN

NYVMCCYHTRACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_1
0.805 0.500
NR2F6
M05648_2.00
Homo sapiens
NRGGTCANYGACCYN

NRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_2
0.805 0.500
Nr1h2
M09620_2.00
Mus musculus
RGGTYACTNNAGGTCA

TGACCTNNAGTRACCY
Misc
Heinz et al.(2010)
RAW-LXRb.biotin_GSE21512
0.803 0.500
Nr2f2
M00184_2.00
Mus musculus
RRGGTCAN

NTGACCYY
PBM
Badis et al.(2009)
Nr2f2_2192
0.800 0.486
NR2F2
M08157_2.00
Homo sapiens
NNAAGGTCANN

NNTGACCTTNN
ChIP-seq
Mathelier et al.(2014)
MA1111.1
0.800 0.486
NR2F2
M08223_2.00
Homo sapiens
AAAGGTCA

TGACCTTT
ChIP-seq
Contrino et al.(2012)
Mv102
0.800 0.486
NR2F2
M08224_2.00
Homo sapiens
GGKCARAGGB

VCCTYTGMCC
ChIP-seq
Contrino et al.(2012)
Mv104
0.800 0.486
NR2F2
M09293_2.00
Homo sapiens
NARRGGTCADRDN

NHYHTGACCYYTN
Misc
Kulakovskiy et al.(2013)
COT2_HUMAN.H11MO.0.A
0.800 0.486
Nr2f2
M09325_2.00
Mus musculus
NNHRAGGTCANVD

HBNTGACCTYDNN
Misc
Kulakovskiy et al.(2013)
COT2_MOUSE.H11MO.0.A
0.800 0.486
NR2F2
M11180_2.00
Homo sapiens
WRRKKTCAARGGYTCA

TGARCCYTTGAMMYYW
Transfac
Matys et al.(2006)
V$ARP1_01
0.800 0.486
NR2F2
M11181_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COUPTF2_Q6
0.800 0.486
GAG_AVIER
M11193_2.00
Avian erythroblastosis virus
VHNTRAGGTCACSSNN

NNSSGTGACCTYANDB
Transfac
Matys et al.(2006)
V$T3R_01
0.799 0.557
Rorc
M09324_2.00
Mus musculus
NDAWSTRRGTCA

TGACYYASWTHN
Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B
0.797 0.500
Rorc
M09617_2.00
Mus musculus
AWBTRGGTCA

TGACCYAVWT
Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019
0.797 0.500
nhr-25
M08226_2.00
Caenorhabditis elegans
MAAGGTCA

TGACCTTK
ChIP-seq
Contrino et al.(2012)
Mw160
0.796 0.529
Rorb
M00820_2.00
Mus musculus
NRGGTCANN

NNTGACCYN
PBM
Weirauch et al.(2013)
pTH3469
0.793 0.514
rorb
M02404_2.00
Tetraodon nigroviridis
NGAGGTCANN

NNTGACCTCN
PBM
Weirauch et al.(2014)
pTH6589
0.793 0.514
RORB
M05677_2.00
Homo sapiens
DAWNTRGGTYAGTRGGTCAN

NTGACCYACTRACCYANWTH
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1
0.793 0.514
RORB
M05678_2.00
Homo sapiens
NAWNKRGGTCAYGACCYMNWTN

NAWNKRGGTCRTGACCYMNWTN
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2
0.793 0.514
RORB
M05883_2.00
Homo sapiens
AWNBRGGTCAN

NTGACCYVNWT
SMiLE-seq
Isakova et al.(2017)
RORb
0.793 0.514
RORB
M11187_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORBETA_Q2
0.793 0.514
RORB
M05679_2.00
Homo sapiens
DAWBTRGGTYAGTRGGTCRN

NYGACCYACTRACCYAVWTH
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1
0.793 0.514
RORB
M05680_2.00
Homo sapiens
NAWNKRGGTCAYGACCYMNWTN

NAWNKRGGTCRTGACCYMNWTN
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2
0.793 0.514
Pparg
M05884_2.00
Mus musculus
HWNTRGGKYANB

VNTRMCCYANWD
SMiLE-seq
Isakova et al.(2017)
PPARg
0.793 0.514
PPARG
M02707_2.00
Homo sapiens
STRGGTCANNDTGACCYANW

WNTRGGTCAHNNTGACCYAS
SELEX
Mathelier et al.(2014)
MA0066.1
0.793 0.514
PPARG
M09278_2.00
Homo sapiens
VWSKRGGKSARAGGKSA

TSMCCTYTSMCCYMSWB
Misc
Kulakovskiy et al.(2013)
PPARG_HUMAN.H11MO.0.A
0.793 0.514
Pparg
M09299_2.00
Mus musculus
HWBTRGGBSARAGGKNA

TNMCCTYTSVCCYAVWD
Misc
Kulakovskiy et al.(2013)
PPARG_MOUSE.H11MO.0.A
0.793 0.514
Pparg
M09612_2.00
Mus musculus
TRGGNCARAGGKCA

TGMCCTYTGNCCYA
Misc
Heinz et al.(2010)
3T3L1-Pparg_GSE13511
0.793 0.514
PPARG
M11138_2.00
Homo sapiens
NNDRRGGTCAAAGGTCAHVND

HNBDTGACCTTTGACCYYHNN
Transfac
Matys et al.(2006)
V$PPARG_01
0.793 0.514
PPARG
M11139_2.00
Homo sapiens
AWBTRGGTCACNDTGACCTASTT

AASTAGGTCAHNGTGACCYAVWT
Transfac
Matys et al.(2006)
V$PPARG_02
0.793 0.514
PPARG
M11140_2.00
Homo sapiens
WWBHRGGNYAAAGKTCA

TGAMCTTTRNCCYDVWW
Transfac
Matys et al.(2006)
V$PPARG_03
0.793 0.514
PPARG
M11141_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PPARG_Q6
0.793 0.514
Q6VU64_APLCA
M02423_2.00
Aplysia californica
NRGGTCAN

NTGACCYN
PBM
Weirauch et al.(2014)
pTH6055
0.791 0.486
nr2f2
M02393_2.00
Danio rerio
NNRGGTCAN

NTGACCYNN
PBM
Weirauch et al.(2014)
pTH5882
0.791 0.471
Nr2f1
M00822_2.00
Mus musculus
DRGGTCRN

NYGACCYH
PBM
Weirauch et al.(2013)
pTH3811
0.791 0.471
NR2F1
M03403_2.00
Homo sapiens
RRGGTCAAAGGTCAN

NTGACCTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_1
0.791 0.471
NR2F1
M03404_2.00
Homo sapiens
RRGGTCAARAGGTCAN

NTGACCTYTTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_2
0.791 0.471
NR2F1
M03405_2.00
Homo sapiens
RRGGTCAN

NTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_3
0.791 0.471
NR2F1
M03406_2.00
Homo sapiens
NHRRGGTCANVNG

CNBNTGACCYYDN
SELEX
Jolma et al.(2013)
NR2F1_4
0.791 0.471
NR2F1
M05661_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_1
0.791 0.471
NR2F1
M05662_2.00
Homo sapiens
VRGGTCANYGACCYY

RRGGTCRNTGACCYB
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_2
0.791 0.471
NR2F1
M05665_2.00
Homo sapiens
VRGGTCAAAGGTCAN

NTGACCTTTGACCYB
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_1
0.791 0.471
NR2F1
M05666_2.00
Homo sapiens
RRGGTCANYGACCYY

RRGGTCRNTGACCYY
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_2
0.791 0.471
NR2F1
M09291_2.00
Homo sapiens
NRRRBSRRRGGKCANVN

NBNTGMCCYYYSVYYYN
Misc
Kulakovskiy et al.(2013)
COT1_HUMAN.H11MO.0.C
0.791 0.471
Nr2f1
M09334_2.00
Mus musculus
YARAGGTCA

TGACCTYTR
Misc
Kulakovskiy et al.(2013)
COT1_MOUSE.H11MO.0.B
0.791 0.471
NR2F1
M11172_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COUPTF1_Q6_01
0.791 0.471
NR2F1
M05663_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_1
0.791 0.471
NR2F1
M05664_2.00
Homo sapiens
NRGGTCANYGACCYH

DRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_2
0.791 0.471
NR2F1
M05667_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_1
0.791 0.471
NR2F1
M05668_2.00
Homo sapiens
RRGGTCRNYGACCYY

RRGGTCRNYGACCYY
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_2
0.791 0.471
Eip75B
M03928_2.00
Drosophila melanogaster
MWVTAGGTCANN

NNTGACCTABWK
SELEX
Nitta et al.(2015)
Eip75B_1
0.789 0.486
Eip75B
M03929_2.00
Drosophila melanogaster
AWNTRGGTCANTRGGTCA

TGACCYANTGACCYANWT
SELEX
Nitta et al.(2015)
Eip75B_2
0.789 0.486
Eip75B
M06416_2.00
Drosophila melanogaster
KWWNTRGGTCA

TGACCYANWWM
B1H
Zhu et al.(2011)
Eip75B_SANGER_5_FBgn0000568
0.789 0.486
THRA
M03368_2.00
Homo sapiens
DTGACCTYATVAGGTCAH

DTGACCTBATRAGGTCAH
SELEX
Jolma et al.(2013)
THRA_1
0.785 0.571
THRA
M09275_2.00
Homo sapiens
RGKWSDNNYVAGGWSAN

NTSWCCTBRNNHSWMCY
Misc
Kulakovskiy et al.(2013)
THA_HUMAN.H11MO.0.C
0.785 0.571
Thra
M09333_2.00
Mus musculus
VRGGKCANNYVRGGHCA

TGDCCYBRNNTGMCCYB
Misc
Kulakovskiy et al.(2013)
THA_MOUSE.H11MO.0.C
0.785 0.571
Thra
M09619_2.00
Mus musculus
GGKCANNYVRGGHCA

TGDCCYBRNNTGMCC
Misc
Heinz et al.(2010)
C17.2-THRa_GSE38347
0.785 0.571
THRA
M11135_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$T3RALPHA_Q6
0.785 0.571
Rora
M00819_2.00
Mus musculus
NNRGGTCA

TGACCYNN
PBM
Weirauch et al.(2013)
pTH3464
0.784 0.500
RORA
M03353_2.00
Homo sapiens
NMRAGGTCAAVYYVAGGTCA

TGACCTBRRBTTGACCTYKN
SELEX
Jolma et al.(2013)
RORA_1
0.784 0.500
RORA
M03354_2.00
Homo sapiens
WAWSTRGGTYASTAGGTCA

TGACCTASTRACCYASWTW
SELEX
Jolma et al.(2013)
RORA_2
0.784 0.500
RORA
M02705_2.00
Homo sapiens
WWVDAGGTCA

TGACCTHBWW
SELEX
Mathelier et al.(2014)
MA0071.1
0.784 0.500
RORA
M02706_2.00
Homo sapiens
NDWAWBTAGGTCAN

NTGACCTAVWTWHN
SELEX
Mathelier et al.(2014)
MA0072.1
0.784 0.500
RORA
M09265_2.00
Homo sapiens
VWNDRGGBCARDR

YHYTGVCCYHNWB
Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C
0.784 0.500
Rora
M09327_2.00
Mus musculus
VWNDRGGBCARDR

YHYTGVCCYHNWB
Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C
0.784 0.500
RORA
M11090_2.00
Homo sapiens
DWWWVDAGGTCAH

DTGACCTHBWWWH
Transfac
Matys et al.(2006)
V$RORA1_01
0.784 0.500
RORA
M11091_2.00
Homo sapiens
DWAWBTAGGTCAN

NTGACCTAVWTWH
Transfac
Matys et al.(2006)
V$RORA2_01
0.784 0.500
RORA
M11092_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORALPHA_Q4
0.784 0.500
RORA
M11093_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORA_Q4
0.784 0.500
ERR
M03941_2.00
Drosophila melanogaster
BSAAGGTCRH

DYGACCTTSV
SELEX
Nitta et al.(2015)
ERR_1
0.781 0.586
ERR
M06433_2.00
Drosophila melanogaster
MAAGGTCA

TGACCTTK
B1H
Zhu et al.(2011)
ERR_SANGER_5_FBgn0035849
0.781 0.586
PPARA
M09295_2.00
Homo sapiens
NWSTRGGBSARAGGKBA

TVMCCTYTSVCCYASWN
Misc
Kulakovskiy et al.(2013)
PPARA_HUMAN.H11MO.0.B
0.777 0.543
Ppara
M09314_2.00
Mus musculus
HWSTRGGBSARAGGKBA

TVMCCTYTSVCCYASWD
Misc
Kulakovskiy et al.(2013)
PPARA_MOUSE.H11MO.0.A
0.777 0.543
PPARA
M11183_2.00
Homo sapiens
CWRAWCYAGGNCAWAGKTCA

TGAMCTWTGNCCTRGWTYWG
Transfac
Matys et al.(2006)
V$PPARA_01
0.777 0.543
PPARA
M11184_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PPARA_Q6
0.777 0.543
NR1H3
M09264_2.00
Homo sapiens
NHRRGGBHABHNNRGGNCA

TGNCCYNNDVTDVCCYYDN
Misc
Kulakovskiy et al.(2013)
NR1H3_HUMAN.H11MO.0.B
0.775 0.500
Nr1h3
M09301_2.00
Mus musculus
VDGDNCARAGKBCAN

NTGVMCTYTGNHCHB
Misc
Kulakovskiy et al.(2013)
NR1H3_MOUSE.H11MO.0.A
0.775 0.500
NR1H4
M00368_2.00
Homo sapiens
NVRGGTCANN

NNTGACCYBN
PBM
Barrera et al.(2016)
NR1H4_REF
0.774 0.514
NR1H4
M05876_2.00
Homo sapiens
DRGKTCAHHKD

HMDDTGAMCYH
SMiLE-seq
Isakova et al.(2017)
NR1H4
0.774 0.514
NR1H4
M08152_2.00
Homo sapiens
NNGGTCATTNN

NNAATGACCNN
ChIP-seq
Mathelier et al.(2014)
MA1110.1
0.774 0.514
NR1H4
M09263_2.00
Homo sapiens
CCBVNVGGYCRBTGMCCYB

VRGGKCAVYGRCCBNBVGG
Misc
Kulakovskiy et al.(2013)
NR1H4_HUMAN.H11MO.0.B
0.774 0.514
Nr1h4
M09332_2.00
Mus musculus
CCBVNVGGYCRBTGMCCYB

VRGGKCAVYGRCCBNBVGG
Misc
Kulakovskiy et al.(2013)
NR1H4_MOUSE.H11MO.0.A
0.774 0.514
Nr1h4
M09618_2.00
Mus musculus
NRGGBCANTGVCCY

RGGBCANTGVCCYN
Misc
Heinz et al.(2010)
Liver-FXR_Chong_et_al.
0.774 0.514
NR1H4
M11086_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q2
0.774 0.514
NR1H4
M11087_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q3
0.774 0.514
NR1H4
M11088_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q5
0.774 0.514
NR1H4
M11089_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXRRXR_Q5
0.774 0.514
NR1H4
M00367_2.00
Homo sapiens
NNNTWTTATDHNN

NNDHATAAWANNN
PBM
Barrera et al.(2016)
NR1H4_C144R
0.774 0.500
Hr4
M06435_2.00
Drosophila melanogaster
AAGGTCA

TGACCTT
B1H
Zhu et al.(2011)
Hr4_SANGER_5_FBgn0023546
0.772 0.557
RORC
M02405_2.00
Tetraodon nigroviridis
NGAGGTCANN

NNTGACCTCN
PBM
Weirauch et al.(2014)
pTH6612
0.767 0.486
NR4A1
M05601_2.00
Homo sapiens
NAAAGGTCAN

NTGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_1
0.764 0.571
NR4A1
M05602_2.00
Homo sapiens
NAAAGGTCAN

NTGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_2
0.764 0.571
NR4A1
M08153_2.00
Homo sapiens
NAAAGGTCAN

NTGACCTTTN
ChIP-seq
Mathelier et al.(2014)
MA1112.1
0.764 0.571
NR4A1
M09274_2.00
Homo sapiens
AAAKGBCAN

NTGVCMTTT
Misc
Kulakovskiy et al.(2013)
NR4A1_HUMAN.H11MO.0.A
0.764 0.571
NR4A1
M09608_2.00
Homo sapiens
NNDNAAAGGTCA

TGACCTTTNHNN
Misc
Heinz et al.(2010)
K562-NR4A1_GSE31363
0.764 0.571
NR4A1
M11132_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NUR77_Q5_01
0.764 0.571
NR4A1
M11133_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NUR77_Q5_02
0.764 0.571
NR4A1
M11134_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NUR77_Q5
0.764 0.571
NR4A1
M05603_2.00
Homo sapiens
NAAAGGTCRN

NYGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_1
0.764 0.571
NR4A1
M05604_2.00
Homo sapiens
NAAAGGTCRN

NYGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_2
0.764 0.571
Nr4a1
M09317_2.00
Mus musculus
NRAADGKCA

TGMCHTTYN
Misc
Kulakovskiy et al.(2013)
NR4A1_MOUSE.H11MO.0.B
0.764 0.557
RORC
M05621_2.00
Homo sapiens
KRGGTCAYGMCCYM

KRGGKCRTGACCYM
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1
0.757 0.486
RORC
M05622_2.00
Homo sapiens
NAWNKRGGTYANTRGGTCAN

NTGACCYANTRACCYMNWTN
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2
0.757 0.486
RORC
M05880_2.00
Homo sapiens
NDAWNTRGGKCA

TGMCCYANWTHN
SMiLE-seq
Isakova et al.(2017)
RORc
0.757 0.486
RORC
M09282_2.00
Homo sapiens
NDAWSTRRGTCA

TGACYYASWTHN
Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C
0.757 0.486
RORC
M05623_2.00
Homo sapiens
TRGGTCAYGACCYA

TRGGTCRTGACCYA
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1
0.757 0.486
RORC
M05624_2.00
Homo sapiens
NAWNTRGGTYASTAGGTCAN

NTGACCTASTRACCYANWTN
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2
0.757 0.486
AAEL009588
M02388_2.00
Aedes aegypti
NRGGTCR

YGACCYN
PBM
Weirauch et al.(2014)
pTH5508
0.751 0.443
Hr46
M02406_2.00
Drosophila melanogaster
NRGGTCAN

NTGACCYN
PBM
Weirauch et al.(2014)
pTH6142
0.751 0.443
Hr46
M03926_2.00
Drosophila melanogaster
RGGTCAGTRGGTCA

TGACCYACTGACCY
SELEX
Nitta et al.(2015)
Hr46_1
0.751 0.443
Hr46
M06412_2.00
Drosophila melanogaster
AWKTGGGTYW

WRACCCAMWT
B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448
0.751 0.443
Hr46
M06413_2.00
Drosophila melanogaster
HWNBAGGTCA

TGACCTVNWD
B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448
0.751 0.443
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_569000002 Nuclear receptor 34 103

Links

Other Nuclear receptor family TFs
Other Branchiostoma floridae TFs

2333 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28312.m000133 Ricinus communis 28312.m000133 I 0.000
29092.m000454 Ricinus communis 29092.m000454 I 0.000
29629.m001435 Ricinus communis 29629.m001435 I 0.000
29636.m000750 Ricinus communis 29636.m000750 I 0.000
29739.m003565 Ricinus communis 29739.m003565 I 0.000
29844.m003222 Ricinus communis 29844.m003222 I 0.000
29851.m002407 Ricinus communis 29851.m002407 I 0.000
29883.m001955 Ricinus communis 29883.m001955 I 0.000
29912.m005397 Ricinus communis 29912.m005397 I 0.000
29912.m005526 Ricinus communis 29912.m005526 I 0.000
29968.m000635 Ricinus communis 29968.m000635 I 0.000
30006.m000287 Ricinus communis 30006.m000287 I 0.000
30026.m001484 Ricinus communis 30026.m001484 I 0.000
30054.m000802 Ricinus communis 30054.m000802 I 0.000
30073.m002276 Ricinus communis 30073.m002276 I 0.000
30147.m014282 Ricinus communis 30147.m014282 I 0.000
30170.m013859 Ricinus communis 30170.m013859 I 0.000
30190.m011156 Ricinus communis 30190.m011156 I 0.000
AC205471.4_FG003 Zea mays AC205471.4_FG003 I 0.000
AC206165.3_FG007 Zea mays AC206165.3_FG007 I 0.000
AC216247.3_FG001 Zea mays AC216247.3_FG001 I 0.000
AMTR_s00002p00270580 Amborella trichopoda AMTR_s00002p00270580 I 0.000
AMTR_s00009p00264800 Amborella trichopoda AMTR_s00009p00264800 I 0.000
AMTR_s00013p00262410 Amborella trichopoda AMTR_s00013p00262410 I 0.000
AMTR_s00036p00115830 Amborella trichopoda AMTR_s00036p00115830 I 0.000
AMTR_s00040p00209530 Amborella trichopoda AMTR_s00040p00209530 I 0.000
AMTR_s00048p00075850 Amborella trichopoda AMTR_s00048p00075850 I 0.000
AMTR_s00069p00068180 Amborella trichopoda AMTR_s00069p00068180 I 0.000
AMTR_s00069p00130920 Amborella trichopoda AMTR_s00069p00130920 I 0.000
AMTR_s00073p00033500 Amborella trichopoda AMTR_s00073p00033500 I 0.000
AMTR_s00095p00016160 Amborella trichopoda AMTR_s00095p00016160 I 0.000
AMTR_s00132p00118400 Amborella trichopoda AMTR_s00132p00118400 I 0.000
AMTR_s00176p00025440 Amborella trichopoda AMTR_s00176p00025440 I 0.000
Aquca_001_00047 Aquilegia coerulea Aquca_001_00047 I 0.000
Aquca_001_00485 Aquilegia coerulea Aquca_001_00485 I 0.000
Aquca_002_01276 Aquilegia coerulea Aquca_002_01276 I 0.000
Aquca_004_00776 Aquilegia coerulea Aquca_004_00776 I 0.000
Aquca_005_00532 Aquilegia coerulea Aquca_005_00532 I 0.000
Aquca_009_00974 Aquilegia coerulea Aquca_009_00974 I 0.000
Aquca_014_00743 Aquilegia coerulea Aquca_014_00743 I 0.000
Aquca_015_00048 Aquilegia coerulea Aquca_015_00048 I 0.000
Aquca_015_00059 Aquilegia coerulea Aquca_015_00059 I 0.000
Aquca_017_00542 Aquilegia coerulea Aquca_017_00542 I 0.000
Aquca_020_00446 Aquilegia coerulea Aquca_020_00446 I 0.000
Aquca_034_00075 Aquilegia coerulea Aquca_034_00075 I 0.000
Aquca_039_00029 Aquilegia coerulea Aquca_039_00029 I 0.000
Aquca_084_00048 Aquilegia coerulea Aquca_084_00048 I 0.000
AT-HSFA3 Vitis vinifera VIT_08s0007g03900 I 0.000
AT-HSFA3 Arabidopsis lyrata scaffold_600303.1 I 0.000
AT-HSFA4A Arabidopsis lyrata fgenesh2_kg.7__2405__AT4G18880.1 I 0.000
AT-HSFA4C Arabidopsis lyrata fgenesh2_kg.8__230__AT5G45710.1 I 0.000
AT-HSFA5 Arabidopsis lyrata fgenesh2_kg.7__2946__AT4G13980.1 I 0.000
AT-HSFA6A Arabidopsis lyrata fgenesh1_pg.C_scaffold_8000489 I 0.000
AT-HSFA6B Arabidopsis lyrata fgenesh2_kg.3__2495__AT3G22830.1 I 0.000
AT-HSFA7A Arabidopsis lyrata fgenesh2_kg.5__1540__AT3G51910.1 I 0.000
AT-HSFA7B Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002781 I 0.000
AT-HSFA8 Vitis vinifera VIT_01s0011g05970 I 0.000
AT-HSFA8 Arabidopsis lyrata Al_scaffold_0002_1461 I 0.000
AT-HSFA9 Arabidopsis lyrata fgenesh2_kg.8__1300__AT5G54070.1 I 0.000
AT-HSFB2A Vitis vinifera VIT_16s0100g00720 I 0.000
AT-HSFB2A Arabidopsis lyrata scaffold_802851.1 I 0.000
AT-HSFB2B Arabidopsis lyrata scaffold_603575.1 I 0.000
AT-HSFB2B Vitis vinifera VIT_02s0025g04170 I 0.000
AT-HSFB3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001910 I 0.000
AT-HSFB3 Vitis vinifera VIT_08s0007g08750 I 0.000
AT-HSFB4 Arabidopsis lyrata fgenesh2_kg.1__3816__AT1G46264.1 I 0.000
AT-HSFB4 Vitis vinifera VIT_18s0001g10380 I 0.000
AT-HSFC1 Vitis vinifera VIT_11s0016g03940 I 0.000
AT-HSFC1 Arabidopsis lyrata fgenesh2_kg.3__2665__AT3G24520.1 I 0.000
AT1G77570 Arabidopsis thaliana AT1G77570 I 0.000
ATHSFA1D Arabidopsis lyrata fgenesh2_kg.1__3374__AT1G32330.1 I 0.000
ATHSFA1E Arabidopsis lyrata fgenesh2_kg.3__246__AT3G02990.1 I 0.000
ATHSFA2 Arabidopsis lyrata fgenesh2_kg.4__531__AT2G26150.1 I 0.000
ATHSFA2 Vitis vinifera VIT_04s0008g01110 I 0.000
BGIOSGA003800 Oryza indica BGIOSGA003800 I 0.000
BGIOSGA004025 Oryza indica BGIOSGA004025 I 0.000
BGIOSGA004402 Oryza indica BGIOSGA004402 I 0.000
BGIOSGA004459 Oryza indica BGIOSGA004459 I 0.000
BGIOSGA006348 Oryza indica BGIOSGA006348 I 0.000
BGIOSGA006438 Oryza indica BGIOSGA006438 I 0.000
BGIOSGA007838 Oryza indica BGIOSGA007838 I 0.000
BGIOSGA009826 Oryza indica BGIOSGA009826 I 0.000
BGIOSGA010671 Oryza indica BGIOSGA010671 I 0.000
BGIOSGA011509 Oryza indica BGIOSGA011509 I 0.000
BGIOSGA011916 Oryza indica BGIOSGA011916 I 0.000
BGIOSGA012151 Oryza indica BGIOSGA012151 I 0.000
BGIOSGA013724 Oryza indica BGIOSGA013724 I 0.000
BGIOSGA016941 Oryza indica BGIOSGA016941 I 0.000
BGIOSGA020240 Oryza indica BGIOSGA020240 I 0.000
BGIOSGA021054 Oryza indica BGIOSGA021054 I 0.000
BGIOSGA023100 Oryza indica BGIOSGA023100 I 0.000
BGIOSGA025247 Oryza indica BGIOSGA025247 I 0.000
BGIOSGA026239 Oryza indica BGIOSGA026239 I 0.000
BGIOSGA026537 Oryza indica BGIOSGA026537 I 0.000
BGIOSGA026829 Oryza indica BGIOSGA026829 I 0.000
BGIOSGA029403 Oryza indica BGIOSGA029403 I 0.000
BGIOSGA029640 Oryza indica BGIOSGA029640 I 0.000
BGIOSGA030901 Oryza indica BGIOSGA030901 I 0.000
BGIOSGA031910 Oryza indica BGIOSGA031910 I 0.000
Bo00967s020 Brassica oleracea Bo00967s020 I 0.000
Bo1g005040 Brassica oleracea Bo1g005040 I 0.000
Bo1g017810 Brassica oleracea Bo1g017810 I 0.000
Bo1g020010 Brassica oleracea Bo1g020010 I 0.000
Bo1g021700 Brassica oleracea Bo1g021700 I 0.000
Bo1g103760 Brassica oleracea Bo1g103760 I 0.000
Bo1g155010 Brassica oleracea Bo1g155010 I 0.000
Bo2g056350 Brassica oleracea Bo2g056350 I 0.000
Bo2g161820 Brassica oleracea Bo2g161820 I 0.000
Bo2g161830 Brassica oleracea Bo2g161830 I 0.000
Bo3g042080 Brassica oleracea Bo3g042080 I 0.000
Bo3g045370 Brassica oleracea Bo3g045370 I 0.000
Bo3g055950 Brassica oleracea Bo3g055950 I 0.000
Bo3g081420 Brassica oleracea Bo3g081420 I 0.000
Bo3g083520 Brassica oleracea Bo3g083520 I 0.000
Bo3g108110 Brassica oleracea Bo3g108110 I 0.000
Bo3g157380 Brassica oleracea Bo3g157380 I 0.000
Bo4g125760 Brassica oleracea Bo4g125760 I 0.000
Bo4g128450 Brassica oleracea Bo4g128450 I 0.000
Bo5g048950 Brassica oleracea Bo5g048950 I 0.000
Bo5g093470 Brassica oleracea Bo5g093470 I 0.000
Bo5g150300 Brassica oleracea Bo5g150300 I 0.000
Bo6g008100 Brassica oleracea Bo6g008100 I 0.000
Bo6g106450 Brassica oleracea Bo6g106450 I 0.000
Bo7g033000 Brassica oleracea Bo7g033000 I 0.000
Bo7g101300 Brassica oleracea Bo7g101300 I 0.000
Bo7g101320 Brassica oleracea Bo7g101320 I 0.000
Bo7g101330 Brassica oleracea Bo7g101330 I 0.000
Bo7g106320 Brassica oleracea Bo7g106320 I 0.000
Bo7g118320 Brassica oleracea Bo7g118320 I 0.000
Bo8g020430 Brassica oleracea Bo8g020430 I 0.000
Bo8g029040 Brassica oleracea Bo8g029040 I 0.000
Bo8g098580 Brassica oleracea Bo8g098580 I 0.000
Bo9g062710 Brassica oleracea Bo9g062710 I 0.000
Bo9g151630 Brassica oleracea Bo9g151630 I 0.000
Bo9g161770 Brassica oleracea Bo9g161770 I 0.000
Bo9g181780 Brassica oleracea Bo9g181780 I 0.000
Bostr.0556s0470 Boechera stricta Bostr.0556s0470 I 0.000
Bostr.11568s0011 Boechera stricta Bostr.11568s0011 I 0.000
Bostr.12302s0136 Boechera stricta Bostr.12302s0136 I 0.000
Bostr.13158s0337 Boechera stricta Bostr.13158s0337 I 0.000
Bostr.19046s0011 Boechera stricta Bostr.19046s0011 I 0.000
Bostr.19424s0169 Boechera stricta Bostr.19424s0169 I 0.000
Bostr.19424s0375 Boechera stricta Bostr.19424s0375 I 0.000
Bostr.20129s0193 Boechera stricta Bostr.20129s0193 I 0.000
Bostr.2128s0078 Boechera stricta Bostr.2128s0078 I 0.000
Bostr.25463s0156 Boechera stricta Bostr.25463s0156 I 0.000
Bostr.2618s0023 Boechera stricta Bostr.2618s0023 I 0.000
Bostr.26326s0040 Boechera stricta Bostr.26326s0040 I 0.000
Bostr.26833s0037 Boechera stricta Bostr.26833s0037 I 0.000
Bostr.26833s0872 Boechera stricta Bostr.26833s0872 I 0.000
Bostr.26959s0010 Boechera stricta Bostr.26959s0010 I 0.000
Bostr.26959s0105 Boechera stricta Bostr.26959s0105 I 0.000
Bostr.30275s0239 Boechera stricta Bostr.30275s0239 I 0.000
Bostr.30275s0365 Boechera stricta Bostr.30275s0365 I 0.000
Bostr.3148s0085 Boechera stricta Bostr.3148s0085 I 0.000
Bostr.3148s0205 Boechera stricta Bostr.3148s0205 I 0.000
Bostr.3359s0126 Boechera stricta Bostr.3359s0126 I 0.000
Bostr.6864s0056 Boechera stricta Bostr.6864s0056 I 0.000
Bostr.7867s1570 Boechera stricta Bostr.7867s1570 I 0.000
Bostr.8819s0096 Boechera stricta Bostr.8819s0096 I 0.000
Bostr.9017s0008 Boechera stricta Bostr.9017s0008 I 0.000
BOTBODRAFT_110728 Botryobasidium botryosum BOTBODRAFT_110728 I 0.000
Bra000235 Brassica rapa Bra000235 I 0.000
Bra000557 Brassica rapa Bra000557 I 0.000
Bra000749 Brassica rapa Bra000749 I 0.000
Bra001071 Brassica rapa Bra001071 I 0.000
Bra001885 Brassica rapa Bra001885 I 0.000
Bra002882 Brassica rapa Bra002882 I 0.000
Bra004272 Brassica rapa Bra004272 I 0.000
Bra007739 Brassica rapa Bra007739 I 0.000
Bra008593 Brassica rapa Bra008593 I 0.000
Bra009515 Brassica rapa Bra009515 I 0.000
Bra010049 Brassica rapa Bra010049 I 0.000
Bra011735 Brassica rapa Bra011735 I 0.000
Bra012571 Brassica rapa Bra012571 I 0.000
Bra012828 Brassica rapa Bra012828 I 0.000
Bra012829 Brassica rapa Bra012829 I 0.000
Bra013253 Brassica rapa Bra013253 I 0.000
Bra013358 Brassica rapa Bra013358 I 0.000
Bra013406 Brassica rapa Bra013406 I 0.000
Bra014054 Brassica rapa Bra014054 I 0.000
Bra015050 Brassica rapa Bra015050 I 0.000
Bra017595 Brassica rapa Bra017595 I 0.000
Bra017800 Brassica rapa Bra017800 I 0.000
Bra020988 Brassica rapa Bra020988 I 0.000
Bra021381 Brassica rapa Bra021381 I 0.000
Bra023258 Brassica rapa Bra023258 I 0.000
Bra023584 Brassica rapa Bra023584 I 0.000
Bra023800 Brassica rapa Bra023800 I 0.000
Bra029291 Brassica rapa Bra029291 I 0.000
Bra029292 Brassica rapa Bra029292 I 0.000
Bra030021 Brassica rapa Bra030021 I 0.000
Bra032023 Brassica rapa Bra032023 I 0.000
Bra032752 Brassica rapa Bra032752 I 0.000
Bra033913 Brassica rapa Bra033913 I 0.000
Bra035507 Brassica rapa Bra035507 I 0.000
Bra035993 Brassica rapa Bra035993 I 0.000
Bra040179 Brassica rapa Bra040179 I 0.000
Bra040634 Brassica rapa Bra040634 I 0.000
Bra040968 Brassica rapa Bra040968 I 0.000
BRADI1G01130 Brachypodium distachyon BRADI1G01130 I 0.000
BRADI1G05550 Brachypodium distachyon BRADI1G05550 I 0.000
BRADI1G08890 Brachypodium distachyon BRADI1G08890 I 0.000
BRADI1G19900 Brachypodium distachyon BRADI1G19900 I 0.000
BRADI1G37720 Brachypodium distachyon BRADI1G37720 I 0.000
BRADI1G38140 Brachypodium distachyon BRADI1G38140 I 0.000
BRADI1G55630 Brachypodium distachyon BRADI1G55630 I 0.000
BRADI1G61620 Brachypodium distachyon BRADI1G61620 I 0.000
BRADI1G69407 Brachypodium distachyon BRADI1G69407 I 0.000
BRADI1G74350 Brachypodium distachyon BRADI1G74350 I 0.000
BRADI2G18980 Brachypodium distachyon BRADI2G18980 I 0.000
BRADI2G41530 Brachypodium distachyon BRADI2G41530 I 0.000
BRADI2G44050 Brachypodium distachyon BRADI2G44050 I 0.000
BRADI2G48990 Brachypodium distachyon BRADI2G48990 I 0.000
BRADI2G49860 Brachypodium distachyon BRADI2G49860 I 0.000
BRADI3G08870 Brachypodium distachyon BRADI3G08870 I 0.000
BRADI3G26920 Brachypodium distachyon BRADI3G26920 I 0.000
BRADI3G42130 Brachypodium distachyon BRADI3G42130 I 0.000
BRADI3G43710 Brachypodium distachyon BRADI3G43710 I 0.000
BRADI3G44700 Brachypodium distachyon BRADI3G44700 I 0.000
BRADI4G32050 Brachypodium distachyon BRADI4G32050 I 0.000
BRADI4G32130 Brachypodium distachyon BRADI4G32130 I 0.000
BRADI4G35780 Brachypodium distachyon BRADI4G35780 I 0.000
BRADI5G18680 Brachypodium distachyon BRADI5G18680 I 0.000
Cagra.0154s0031 Capsella grandiflora Cagra.0154s0031 I 0.000
Cagra.0434s0049 Capsella grandiflora Cagra.0434s0049 I 0.000
Cagra.0664s0066 Capsella grandiflora Cagra.0664s0066 I 0.000
Cagra.0796s0014 Capsella grandiflora Cagra.0796s0014 I 0.000
Cagra.0914s0008 Capsella grandiflora Cagra.0914s0008 I 0.000
Cagra.1043s0019 Capsella grandiflora Cagra.1043s0019 I 0.000
Cagra.1194s0002 Capsella grandiflora Cagra.1194s0002 I 0.000
Cagra.13025s0005 Capsella grandiflora Cagra.13025s0005 I 0.000
Cagra.13025s0006 Capsella grandiflora Cagra.13025s0006 I 0.000
Cagra.1735s0008 Capsella grandiflora Cagra.1735s0008 I 0.000
Cagra.1912s0005 Capsella grandiflora Cagra.1912s0005 I 0.000
Cagra.2774s0015 Capsella grandiflora Cagra.2774s0015 I 0.000
Cagra.2848s0007 Capsella grandiflora Cagra.2848s0007 I 0.000
Cagra.3262s0013 Capsella grandiflora Cagra.3262s0013 I 0.000
Cagra.3356s0067 Capsella grandiflora Cagra.3356s0067 I 0.000
Cagra.3957s0014 Capsella grandiflora Cagra.3957s0014 I 0.000
Cagra.4306s0004 Capsella grandiflora Cagra.4306s0004 I 0.000
Cagra.4553s0008 Capsella grandiflora Cagra.4553s0008 I 0.000
Cagra.4610s0006 Capsella grandiflora Cagra.4610s0006 I 0.000
Cagra.4622s0012 Capsella grandiflora Cagra.4622s0012 I 0.000
Cagra.4909s0039 Capsella grandiflora Cagra.4909s0039 I 0.000
Cagra.6369s0005 Capsella grandiflora Cagra.6369s0005 I 0.000
Cagra.7254s0011 Capsella grandiflora Cagra.7254s0011 I 0.000
Cagra.7662s0001 Capsella grandiflora Cagra.7662s0001 I 0.000
CaO19.454 Candida albicans CaO19.454 I 0.000
CaO19.8085 Candida albicans CaO19.8085 I 0.000
Carubv10001065m.g Capsella rubella Carubv10001065m.g I 0.000
Carubv10001204m.g Capsella rubella Carubv10001204m.g I 0.000
Carubv10003259m.g Capsella rubella Carubv10003259m.g I 0.000
Carubv10004729m.g Capsella rubella Carubv10004729m.g I 0.000
Carubv10004840m.g Capsella rubella Carubv10004840m.g I 0.000
Carubv10004953m.g Capsella rubella Carubv10004953m.g I 0.000
Carubv10005408m.g Capsella rubella Carubv10005408m.g I 0.000
Carubv10007333m.g Capsella rubella Carubv10007333m.g I 0.000
Carubv10007409m.g Capsella rubella Carubv10007409m.g I 0.000
Carubv10008952m.g Capsella rubella Carubv10008952m.g I 0.000
Carubv10009522m.g Capsella rubella Carubv10009522m.g I 0.000
Carubv10013628m.g Capsella rubella Carubv10013628m.g I 0.000
Carubv10013808m.g Capsella rubella Carubv10013808m.g I 0.000
Carubv10014189m.g Capsella rubella Carubv10014189m.g I 0.000
Carubv10019491m.g Capsella rubella Carubv10019491m.g I 0.000
Carubv10023839m.g Capsella rubella Carubv10023839m.g I 0.000
Carubv10024599m.g Capsella rubella Carubv10024599m.g I 0.000
Carubv10025710m.g Capsella rubella Carubv10025710m.g I 0.000
Carubv10026722m.g Capsella rubella Carubv10026722m.g I 0.000
Carubv10026734m.g Capsella rubella Carubv10026734m.g I 0.000
Carubv10027643m.g Capsella rubella Carubv10027643m.g I 0.000
Carubv10028300m.g Capsella rubella Carubv10028300m.g I 0.000
Carubv10028638m.g Capsella rubella Carubv10028638m.g I 0.000
cassava12279.valid.m1 Manihot esculenta cassava12279.valid.m1 I 0.000
cassava13765.valid.m1 Manihot esculenta cassava13765.valid.m1 I 0.000
cassava14176.m1 Manihot esculenta cassava14176.m1 I 0.000
cassava14443.m1 Manihot esculenta cassava14443.m1 I 0.000
cassava14764.m1 Manihot esculenta cassava14764.m1 I 0.000
cassava18058.valid.m1 Manihot esculenta cassava18058.valid.m1 I 0.000
cassava18146.valid.m1 Manihot esculenta cassava18146.valid.m1 I 0.000
cassava18944.valid.m1 Manihot esculenta cassava18944.valid.m1 I 0.000
cassava19285.valid.m1 Manihot esculenta cassava19285.valid.m1 I 0.000
cassava24315.valid.m1 Manihot esculenta cassava24315.valid.m1 I 0.000
cassava24591.valid.m1 Manihot esculenta cassava24591.valid.m1 I 0.000
cassava24811.valid.m1 Manihot esculenta cassava24811.valid.m1 I 0.000
cassava28692.m1 Manihot esculenta cassava28692.m1 I 0.000
cassava29954.valid.m1 Manihot esculenta cassava29954.valid.m1 I 0.000
cassava3089.m1 Manihot esculenta cassava3089.m1 I 0.000
cassava31881.m1 Manihot esculenta cassava31881.m1 I 0.000
cassava3334.m1 Manihot esculenta cassava3334.m1 I 0.000
cassava33604.m1 Manihot esculenta cassava33604.m1 I 0.000
cassava34318.m1 Manihot esculenta cassava34318.m1 I 0.000
cassava35362.valid.m1 Manihot esculenta cassava35362.valid.m1 I 0.000
cassava3537.m1 Manihot esculenta cassava3537.m1 I 0.000
cassava3540.m1 Manihot esculenta cassava3540.m1 I 0.000
cassava35573.valid.m1 Manihot esculenta cassava35573.valid.m1 I 0.000
cassava41329.m1 Manihot esculenta cassava41329.m1 I 0.000
cassava42663.valid.m1 Manihot esculenta cassava42663.valid.m1 I 0.000
cassava43059.valid.m1 Manihot esculenta cassava43059.valid.m1 I 0.000
cassava44107.valid.m1 Manihot esculenta cassava44107.valid.m1 I 0.000
cassava44108.valid.m1 Manihot esculenta cassava44108.valid.m1 I 0.000
cassava7014.valid.m1 Manihot esculenta cassava7014.valid.m1 I 0.000
cassava721.valid.m1 Manihot esculenta cassava721.valid.m1 I 0.000
cassava7697.valid.m1 Manihot esculenta cassava7697.valid.m1 I 0.000
cassava8193.valid.m1 Manihot esculenta cassava8193.valid.m1 I 0.000
Ca_00428 Cicer arietinum Ca_00428 I 0.000
Ca_01551 Cicer arietinum Ca_01551 I 0.000
Ca_01640 Cicer arietinum Ca_01640 I 0.000
Ca_02416 Cicer arietinum Ca_02416 I 0.000
Ca_03183 Cicer arietinum Ca_03183 I 0.000
Ca_04488 Cicer arietinum Ca_04488 I 0.000
Ca_04554 Cicer arietinum Ca_04554 I 0.000
Ca_07234 Cicer arietinum Ca_07234 I 0.000
Ca_07800 Cicer arietinum Ca_07800 I 0.000
Ca_08536 Cicer arietinum Ca_08536 I 0.000
Ca_08627 Cicer arietinum Ca_08627 I 0.000
Ca_09277 Cicer arietinum Ca_09277 I 0.000
Ca_10406 Cicer arietinum Ca_10406 I 0.000
Ca_11222 Cicer arietinum Ca_11222 I 0.000
Ca_11487 Cicer arietinum Ca_11487 I 0.000
Ca_12183 Cicer arietinum Ca_12183 I 0.000
Ca_12967 Cicer arietinum Ca_12967 I 0.000
Ca_19774 Cicer arietinum Ca_19774 I 0.000
CHLREDRAFT_117914 Chlamydomonas reinhardtii CHLREDRAFT_117914 I 0.000
CHLREDRAFT_122706 Chlamydomonas reinhardtii CHLREDRAFT_122706 I 0.000
chr1.CM0133.110.nc Lotus japonicus chr1.CM0133.110.nc I 0.000
chr1.CM0322.130.nc Lotus japonicus chr1.CM0322.130.nc I 0.000
chr2.CM0304.780.nc Lotus japonicus chr2.CM0304.780.nc I 0.000
chr2.CM0308.60.nd Lotus japonicus chr2.CM0308.60.nd I 0.000
chr3.CM0127.360.nc Lotus japonicus chr3.CM0127.360.nc I 0.000
chr4.CM0042.1510.nc Lotus japonicus chr4.CM0042.1510.nc I 0.000
chr4.CM0046.500.nc Lotus japonicus chr4.CM0046.500.nc I 0.000
chr4.CM0297.80.nd Lotus japonicus chr4.CM0297.80.nd I 0.000
chr5.CM0024.490.nc Lotus japonicus chr5.CM0024.490.nc I 0.000
chr5.CM0357.390.nc Lotus japonicus chr5.CM0357.390.nc I 0.000
chr5.CM0359.140.nc Lotus japonicus chr5.CM0359.140.nc I 0.000
chr6.CM0118.920.nd Lotus japonicus chr6.CM0118.920.nd I 0.000
Ciclev10001482m.g Citrus clementina Ciclev10001482m.g I 0.000
Ciclev10005649m.g Citrus clementina Ciclev10005649m.g I 0.000
Ciclev10006893m.g Citrus clementina Ciclev10006893m.g I 0.000
Ciclev10006902m.g Citrus clementina Ciclev10006902m.g I 0.000
Ciclev10008116m.g Citrus clementina Ciclev10008116m.g I 0.000
Ciclev10008617m.g Citrus clementina Ciclev10008617m.g I 0.000
Ciclev10008768m.g Citrus clementina Ciclev10008768m.g I 0.000
Ciclev10011531m.g Citrus clementina Ciclev10011531m.g I 0.000
Ciclev10015413m.g Citrus clementina Ciclev10015413m.g I 0.000
Ciclev10015472m.g Citrus clementina Ciclev10015472m.g I 0.000
Ciclev10015541m.g Citrus clementina Ciclev10015541m.g I 0.000
Ciclev10016707m.g Citrus clementina Ciclev10016707m.g I 0.000
Ciclev10020718m.g Citrus clementina Ciclev10020718m.g I 0.000
Ciclev10021287m.g Citrus clementina Ciclev10021287m.g I 0.000
Ciclev10026058m.g Citrus clementina Ciclev10026058m.g I 0.000
Cla000728 Citrullus lanatus Cla000728 I 0.000
Cla002238 Citrullus lanatus Cla002238 I 0.000
Cla002549 Citrullus lanatus Cla002549 I 0.000
Cla002971 Citrullus lanatus Cla002971 I 0.000
Cla006127 Citrullus lanatus Cla006127 I 0.000