LCUP004919 (Lucilia cuprina)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 LCUP004919 T307119_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
eg
M03927_2.00 		Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN		 SELEX
Nitta et al.(2015)
eg_1 		0.985 0.971
eg
M06415_2.00 		Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY		 B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560 		0.985 0.971
AGAP010438
M02389_2.00 		Anopheles gambiae
NRGDKCRNN
NNYGMHCYN		 PBM
Weirauch et al.(2014)
pTH6429 		0.979 0.871
knrl
M03930_2.00 		Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT		 SELEX
Nitta et al.(2015)
knrl_1 		0.977 0.857
knrl
M03931_2.00 		Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT		 SELEX
Nitta et al.(2015)
knrl_2 		0.977 0.857
knrl
M06422_2.00 		Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT		 B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323 		0.977 0.857
kni
M06557_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Mathelier et al.(2014)
MA0451.1 		0.971 0.829
kni
M06419_2.00 		Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY		 B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320 		0.971 0.829
kni
M06420_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320 		0.971 0.829
kni
M06421_2.00 		Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY		 B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320 		0.971 0.829
kni
M08225_2.00 		Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR		 ChIP-seq
Contrino et al.(2012)
Mf24 		0.971 0.829
kni
M09687_2.00 		Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN		 Misc
Kulakovskiy et al.(2009)
kni 		0.971 0.829
kni
M11189_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$KNI_Q6 		0.971 0.829
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP004919-PA Nuclear receptor 3 85

Links

Other Nuclear receptor family TFs
Other Lucilia cuprina TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O9_01300 Exophiala aquamarina A1O9_01300 I 0.000
AB08968.1 Alternaria brassicicola AB08968.1 I 0.000
ACRE_056860 Acremonium chrysogenum ACRE_056860 I 0.000
AOL_s00079g257 Arthrobotrys oligospora AOL_s00079g257 I 0.000
ACLA_082980 Aspergillus clavatus CADACLAG00007994 I 0.000
CADAFLAG00007235 Aspergillus flavus CADAFLAG00007235 I 0.000
AFUA_6G09930 Aspergillus fumigatus CADAFUAG00001764 I 0.000
CADANGAG00009121 Aspergillus niger CADANGAG00009121 I 0.000
ANIA_04562 Aspergillus nidulans CADANIAG00005876 D 0.000
ATEG_06717 Aspergillus terreus CADATEAG00007654 I 0.000
NFIA_055660 Neosartorya fischeri CADNFIAG00004667 I 0.000
CHGG_06554 Chaetomium globosum CHGG_06554 I 0.000
COCC4DRAFT_125759 Bipolaris maydis COCC4DRAFT_125759 I 0.000
COCCADRAFT_29461 Bipolaris zeicola COCCADRAFT_29461 I 0.000
COCMIDRAFT_108054 Bipolaris oryzae COCMIDRAFT_108054 I 0.000
COCSADRAFT_86485 Bipolaris sorokiniana COCSADRAFT_86485 I 0.000
COCVIDRAFT_20419 Bipolaris victoriae COCVIDRAFT_20419 I 0.000
COCVIDRAFT_30018 Bipolaris victoriae COCVIDRAFT_30018 I 0.000
CTHT_0012120 Chaetomium thermophilum CTHT_0012120 I 0.000
estExt_Genewise1Plus.C_40021 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_40021 I 0.000
EURHEDRAFT_409443 Aspergillus ruber EURHEDRAFT_409443 I 0.000
e_gw1.6.308.1 Phycomyces blakesleeanus e_gw1.6.308.1 N 0.000
e_gw1.9.210.1 Phycomyces blakesleeanus e_gw1.9.210.1 N 0.000
F503_06201 Ophiostoma piceae uamh F503_06201 I 0.000
fgenesh1_pm.00118_#_216 Aspergillus carbonarius fgenesh1_pm.00118_#_216 I 0.000
fgeneshMC_pg.5_#_704 Mucor circinelloides fgeneshMC_pg.5_#_704 I 0.000
GGTG_04663 Gaeumannomyces graminis GGTG_04663 I 0.000
GLOINDRAFT_44500 Rhizophagus irregularis GLOINDRAFT_44500 I 0.000
gw1.2.958.1 Phycomyces blakesleeanus gw1.2.958.1 I 0.000
gw1.26.112.1 Phycomyces blakesleeanus gw1.26.112.1 N 0.000
gw1.4.1798.1 Mucor circinelloides gw1.4.1798.1 I 0.000
gw1.8.779.1 Mucor circinelloides gw1.8.779.1 I 0.000
gw1.9.618.1 Mucor circinelloides gw1.9.618.1 I 0.000
HMPREF1624_04787 Sporothrix schenckii HMPREF1624_04787 I 0.000
LEMA_P113690.1 Leptosphaeria maculans LEMA_P113690.1 I 0.000
MCYG_04996 Arthroderma otae MCYG_04996 I 0.000
MCYG_04996 Microsporum canis MCYG_04996 I 0.000
MGG_02632 Magnaporthe oryzae MGG_02632 I 0.000
MYCTH_2298160 Myceliophthora thermophila MYCTH_2298160 I 0.000
PDE_03264 Penicillium oxalicum PDE_03264 I 0.000
PTRG_07150 Pyrenophora triticirepentis PTRG_07150 I 0.000
PTT_08596 Pyrenophora teres PTT_08596 I 0.000
PV05_09803 Exophiala xenobiotica PV05_09803 I 0.000
PV08_01459 Exophiala spinifera PV08_01459 I 0.000
PV11_09617 Exophiala sideris PV11_09617 I 0.000
RO3G_07291 Rhizopus oryzae RO3G_07291 I 0.000
RO3G_11752 Rhizopus oryzae RO3G_11752 I 0.000
RO3G_13320 Rhizopus oryzae RO3G_13320 I 0.000
S40285_07743 Stachybotrys chlorohalonata S40285_07743 I 0.000
S40288_03446 Stachybotrys chartarum S40288_03446 I 0.000
SAPIO_CDS6640 Scedosporium apiospermum SAPIO_CDS6640 I 0.000
SBOR_5107 Sclerotinia borealis SBOR_5107 I 0.000
SETTUDRAFT_111603 Setosphaeria turcica SETTUDRAFT_111603 I 0.000
SNOG_00166 Stagonospora nodorum SNOG_00166 I 0.000
SNOG_00166 Phaeosphaeria nodorum SNOG_00166 I 0.000
THITE_2111586 Thielavia terrestris THITE_2111586 I 0.000
TRIATDRAFT_300980 Trichoderma atroviride TRIATDRAFT_300980 I 0.000
TRIREDRAFT_74576 Trichoderma reesei TRIREDRAFT_74576 I 0.000
TSTA_082530 Talaromyces stipitatus TSTA_082530 I 0.000
UCRNP2_115 Neofusicoccum parvum UCRNP2_115 I 0.000
W97_06787 Coniosporium apollinis W97_06787 I 0.000