CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP004919
(
Lucilia cuprina
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
LCUP004919
T307119_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
eg
M03927_2.00
Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN
SELEX
Nitta et al.(2015)
eg_1
0.985
0.971
eg
M06415_2.00
Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY
B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560
0.985
0.971
AGAP010438
M02389_2.00
Anopheles gambiae
NRGDKCRNN
NNYGMHCYN
PBM
Weirauch et al.(2014)
pTH6429
0.979
0.871
knrl
M03930_2.00
Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT
SELEX
Nitta et al.(2015)
knrl_1
0.977
0.857
knrl
M03931_2.00
Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT
SELEX
Nitta et al.(2015)
knrl_2
0.977
0.857
knrl
M06422_2.00
Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT
B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323
0.977
0.857
kni
M06557_2.00
Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT
B1H
Mathelier et al.(2014)
MA0451.1
0.971
0.829
kni
M06419_2.00
Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY
B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320
0.971
0.829
kni
M06420_2.00
Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT
B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320
0.971
0.829
kni
M06421_2.00
Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY
B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320
0.971
0.829
kni
M08225_2.00
Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR
ChIP-seq
Contrino et al.(2012)
Mf24
0.971
0.829
kni
M09687_2.00
Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN
Misc
Kulakovskiy et al.(2009)
kni
0.971
0.829
kni
M11189_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$KNI_Q6
0.971
0.829
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP004919-PA
Nuclear receptor
3
85
QLCKVCGEPAAGFHFGAFTCEGCKKMFITCDRHDLFSFFGRTYNNISAIAGCKNNGDCVINKKNRTACKACRLRKCLLVGMSK
Links
Other
Nuclear receptor
family TFs
Other
Lucilia cuprina
TFs
102 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O9_01300
Exophiala aquamarina
A1O9_01300
I
0.000
AB08968.1
Alternaria brassicicola
AB08968.1
I
0.000
ACRE_056860
Acremonium chrysogenum
ACRE_056860
I
0.000
AOL_s00079g257
Arthrobotrys oligospora
AOL_s00079g257
I
0.000
ACLA_082980
Aspergillus clavatus
CADACLAG00007994
I
0.000
CADAFLAG00007235
Aspergillus flavus
CADAFLAG00007235
I
0.000
AFUA_6G09930
Aspergillus fumigatus
CADAFUAG00001764
I
0.000
CADANGAG00009121
Aspergillus niger
CADANGAG00009121
I
0.000
ANIA_04562
Aspergillus nidulans
CADANIAG00005876
D
0.000
ATEG_06717
Aspergillus terreus
CADATEAG00007654
I
0.000
NFIA_055660
Neosartorya fischeri
CADNFIAG00004667
I
0.000
CHGG_06554
Chaetomium globosum
CHGG_06554
I
0.000
COCC4DRAFT_125759
Bipolaris maydis
COCC4DRAFT_125759
I
0.000
COCCADRAFT_29461
Bipolaris zeicola
COCCADRAFT_29461
I
0.000
COCMIDRAFT_108054
Bipolaris oryzae
COCMIDRAFT_108054
I
0.000
COCSADRAFT_86485
Bipolaris sorokiniana
COCSADRAFT_86485
I
0.000
COCVIDRAFT_20419
Bipolaris victoriae
COCVIDRAFT_20419
I
0.000
COCVIDRAFT_30018
Bipolaris victoriae
COCVIDRAFT_30018
I
0.000
CTHT_0012120
Chaetomium thermophilum
CTHT_0012120
I
0.000
estExt_Genewise1Plus.C_40021
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_40021
I
0.000
EURHEDRAFT_409443
Aspergillus ruber
EURHEDRAFT_409443
I
0.000
e_gw1.6.308.1
Phycomyces blakesleeanus
e_gw1.6.308.1
N
0.000
e_gw1.9.210.1
Phycomyces blakesleeanus
e_gw1.9.210.1
N
0.000
F503_06201
Ophiostoma piceae uamh
F503_06201
I
0.000
fgenesh1_pm.00118_#_216
Aspergillus carbonarius
fgenesh1_pm.00118_#_216
I
0.000
fgeneshMC_pg.5_#_704
Mucor circinelloides
fgeneshMC_pg.5_#_704
I
0.000
GGTG_04663
Gaeumannomyces graminis
GGTG_04663
I
0.000
GLOINDRAFT_44500
Rhizophagus irregularis
GLOINDRAFT_44500
I
0.000
gw1.2.958.1
Phycomyces blakesleeanus
gw1.2.958.1
I
0.000
gw1.26.112.1
Phycomyces blakesleeanus
gw1.26.112.1
N
0.000
gw1.4.1798.1
Mucor circinelloides
gw1.4.1798.1
I
0.000
gw1.8.779.1
Mucor circinelloides
gw1.8.779.1
I
0.000
gw1.9.618.1
Mucor circinelloides
gw1.9.618.1
I
0.000
HMPREF1624_04787
Sporothrix schenckii
HMPREF1624_04787
I
0.000
LEMA_P113690.1
Leptosphaeria maculans
LEMA_P113690.1
I
0.000
MCYG_04996
Arthroderma otae
MCYG_04996
I
0.000
MCYG_04996
Microsporum canis
MCYG_04996
I
0.000
MGG_02632
Magnaporthe oryzae
MGG_02632
I
0.000
MYCTH_2298160
Myceliophthora thermophila
MYCTH_2298160
I
0.000
PDE_03264
Penicillium oxalicum
PDE_03264
I
0.000
PTRG_07150
Pyrenophora triticirepentis
PTRG_07150
I
0.000
PTT_08596
Pyrenophora teres
PTT_08596
I
0.000
PV05_09803
Exophiala xenobiotica
PV05_09803
I
0.000
PV08_01459
Exophiala spinifera
PV08_01459
I
0.000
PV11_09617
Exophiala sideris
PV11_09617
I
0.000
RO3G_07291
Rhizopus oryzae
RO3G_07291
I
0.000
RO3G_11752
Rhizopus oryzae
RO3G_11752
I
0.000
RO3G_13320
Rhizopus oryzae
RO3G_13320
I
0.000
S40285_07743
Stachybotrys chlorohalonata
S40285_07743
I
0.000
S40288_03446
Stachybotrys chartarum
S40288_03446
I
0.000
SAPIO_CDS6640
Scedosporium apiospermum
SAPIO_CDS6640
I
0.000
SBOR_5107
Sclerotinia borealis
SBOR_5107
I
0.000
SETTUDRAFT_111603
Setosphaeria turcica
SETTUDRAFT_111603
I
0.000
SNOG_00166
Stagonospora nodorum
SNOG_00166
I
0.000
SNOG_00166
Phaeosphaeria nodorum
SNOG_00166
I
0.000
THITE_2111586
Thielavia terrestris
THITE_2111586
I
0.000
TRIATDRAFT_300980
Trichoderma atroviride
TRIATDRAFT_300980
I
0.000
TRIREDRAFT_74576
Trichoderma reesei
TRIREDRAFT_74576
I
0.000
TSTA_082530
Talaromyces stipitatus
TSTA_082530
I
0.000
UCRNP2_115
Neofusicoccum parvum
UCRNP2_115
I
0.000
W97_06787
Coniosporium apollinis
W97_06787
I
0.000