SMU15000328 (Schmidtea mediterranea)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMU15000328 T307179_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NR5A2
M05589_2.00 		Homo sapiens
YCAAGGYCRYGRCCTTSR
YSAAGGYCRYGRCCTTGR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_1 		0.826 0.486
NR5A2
M05590_2.00 		Homo sapiens
NYCAAGGTCAH
DTGACCTTGRN		 SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_2 		0.826 0.486
NR5A2
M05591_2.00 		Homo sapiens
YGRCCTTSVNYSAAGGYCR
YGRCCTTSRNBSAAGGYCR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_3 		0.826 0.486
NR5A2
M09271_2.00 		Homo sapiens
NBYCAAGGYCA
TGRCCTTGRVN		 Misc
Kulakovskiy et al.(2013)
NR5A2_HUMAN.H11MO.0.B 		0.826 0.486
NR5A2
M11126_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRH1_Q5_01 		0.826 0.486
NR5A2
M11127_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRH1_Q5 		0.826 0.486
NR5A2
M11128_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRH1_Q6 		0.826 0.486
NR5A2
M05592_2.00 		Homo sapiens
YCAAGGYCRYGACCTTSR
YSAAGGTCRYGRCCTTGR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_1 		0.826 0.486
NR5A2
M05593_2.00 		Homo sapiens
NYCAAGGTCRH
DYGACCTTGRN		 SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_2 		0.826 0.486
NR5A2
M05594_2.00 		Homo sapiens
YGRCCTTSVNBSAAGGYCR
YGRCCTTSVNBSAAGGYCR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_3 		0.826 0.486
Nr5a2
M00816_2.00 		Mus musculus
VAAGGTCR
YGACCTTB		 PBM
Weirauch et al.(2013)
pTH3468 		0.821 0.486
Nr5a2
M08158_2.00 		Mus musculus
VRDBTCAAGGYCANN
NNTGRCCTTGAVHYB		 ChIP-seq
Mathelier et al.(2014)
MA0505.1 		0.821 0.486
Nr5a2
M09320_2.00 		Mus musculus
NBYCAAGGYCA
TGRCCTTGRVN		 Misc
Kulakovskiy et al.(2013)
NR5A2_MOUSE.H11MO.0.A 		0.821 0.486
Nr5a2
M09616_2.00 		Mus musculus
BYCAAGGYCA
TGRCCTTGRV		 Misc
Heinz et al.(2010)
Pancreas-LRH1_GSE34295 		0.821 0.486
Nr5a2
M09615_2.00 		Mus musculus
BYCAAGGYCA
TGRCCTTGRV		 Misc
Heinz et al.(2010)
mES-Nr5a2_GSE19019 		0.821 0.486
ftz-f1
M02407_2.00 		Drosophila melanogaster
RRGGTCAH
DTGACCYY		 PBM
Weirauch et al.(2014)
pTH5709 		0.804 0.486
ftz-f1
M06417_2.00 		Drosophila melanogaster
MMRKYYSAAGGWCRCYGM
KCRGYGWCCTTSRRMYKK		 B1H
Zhu et al.(2011)
ftz-f1_FlyReg_FBgn0001078 		0.804 0.486
ftz-f1
M06418_2.00 		Drosophila melanogaster
AAGGTCA
TGACCTT		 B1H
Zhu et al.(2011)
ftz-f1_SANGER_5_FBgn0001078 		0.804 0.486
NR5A1
M05613_2.00 		Homo sapiens
NNCAAGGYCRN
NYGRCCTTGNN		 SELEX
Yin et al.(2017)
NR5A1_FL_HT-SELEX 		0.767 0.471
Nr5a1
M09322_2.00 		Mus musculus
NBYCAAGGYCA
TGRCCTTGRVN		 Misc
Kulakovskiy et al.(2013)
STF1_MOUSE.H11MO.0.B 		0.767 0.471
NR5A1
M11142_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SF1_Q5_01 		0.767 0.471
NR5A1
M11143_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SF1_Q5 		0.767 0.471
NR5A1
M11144_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SF1_Q6_01 		0.767 0.471
NR5A1
M11145_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SF1_Q6 		0.767 0.471
NR5A1
M05614_2.00 		Homo sapiens
NNSAAGGHCRN
NYGDCCTTSNN		 SELEX
Yin et al.(2017)
NR5A1_FL_Methyl-HT-SELEX 		0.767 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15000328 Nuclear receptor 53 124

Links

Other Nuclear receptor family TFs
Other Schmidtea mediterranea TFs

201 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ECANG7_04955 Echinococcus canadensis ECANG7_04955 N 0.957
MCOS_0000023701 Mesocestoides corti MCOS_0000023701 N 0.957
EmuJ_000623600 Echinococcus multilocularis EmuJ_000623600 N 0.957
TASK_0000026001 Taenia asiatica TASK_0000026001 N 0.957
TsM_000945100 Taenia solium TsM_000945100 N 0.957
TTAC_0000068601 Hydatigera taeniaeformis TTAC_0000068601 N 0.957
HNAJ_0001018501 Hymenolepis nana HNAJ_0001018501 N 0.951
HmN_000662400 Hymenolepis microstoma HmN_000662400 N 0.950
Smp_036500 Schistosoma mansoni Smp_036500 N 0.946
SMRZ_0000423901 Schistosoma margrebowiei SMRZ_0000423901 N 0.944
CapteG121837 Capitella teleta CapteG121837 I 0.849
CapteG224377 Capitella teleta CapteG224377 I 0.849
BXY_0653800 Bursaphelenchus xylophilus BXY_0653800 I 0.840
e_gw.62.52.1 Branchiostoma floridae e_gw.62.52.1 I 0.832
e_gw.62.54.1 Branchiostoma floridae e_gw.62.54.1 I 0.832
NR5A2 Monodelphis domestica ENSMODG00000012833 I 0.826
NR5A2 Macaca mulatta ENSMMUG00000016188 I 0.826
ENSMPUG00000010466 Mustela putorius furo ENSMPUG00000010466 I 0.826
Aan_R014757 Calypte anna Aan_R014757 I 0.826
Brh_R011112 Buceros rhinoceros Brh_R011112 I 0.826
Afo_R004006 Aptenodytes forsteri Afo_R004006 I 0.826
ENSNLEG00000018066 Nomascus leucogenys ENSNLEG00000018066 I 0.826
Alligator_sinensis_CCG011252.1 Alligator sinensis Alligator_sinensis_CCG011252.1 I 0.826
ENSLOCG00000007670 Lepisosteus oculatus ENSLOCG00000007670 I 0.826
NR5A2 Loxodonta africana ENSLAFG00000008809 I 0.826
ENSLACG00000003490 Latimeria chalumnae ENSLACG00000003490 I 0.826
ENSP00000356331 Macaca fascicularis ENSP00000356331 I 0.826
ENSP00000356331-D1 Bos grunniens ENSP00000356331-D1 I 0.826
Cmyd_10011290 Chelonia mydas Cmyd_10011290 I 0.826
ENSMICG00000011337 Microcebus murinus ENSMICG00000011337 I 0.826
NR5A2 Meleagris gallopavo ENSMGAG00000005896 I 0.826
NR5A2 Ornithorhynchus anatinus ENSOANG00000005642 I 0.826
ENSMLUG00000013283 Myotis lucifugus ENSMLUG00000013283 I 0.826
ENSXMAG00000006009 Xiphophorus maculatus ENSXMAG00000006009 I 0.826
nr5a2 Takifugu rubripes ENSTRUG00000009548 I 0.826
ENSPPYG00000000379 Pongo abelii ENSPPYG00000000379 I 0.826
ENSPFOG00000024036 Poecilia formosa ENSPFOG00000024036 I 0.826
ENSPSIG00000003632 Pelodiscus sinensis ENSPSIG00000003632 I 0.826
NR5A2 Pan troglodytes ENSPTRG00000001818 I 0.826
ENSSHAG00000011399 Sarcophilus harrisii ENSSHAG00000011399 I 0.826
NR5A2 Sorex araneus ENSSARG00000009752 I 0.826
nr5a2 Tetraodon nigroviridis ENSTNIG00000004616 I 0.826
ENSTSYG00000005740 Tarsius syrichta ENSTSYG00000005740 I 0.826
NR5A2 Tursiops truncatus ENSTTRG00000003256 I 0.826
ENSONIG00000012517 Oreochromis niloticus ENSONIG00000012517 I 0.826
NR5A2 Otolemur garnettii ENSOGAG00000025622 I 0.826
NR5A2 Oryctolagus cuniculus ENSOCUG00000006240 I 0.826
NR5A2 Ochotona princeps ENSOPRG00000016263 I 0.826
Gfo_R006634 Geospiza fortis Gfo_R006634 I 0.826
ENSPANG00000015834 Papio anubis ENSPANG00000015834 I 0.826
NR5A2 Vicugna pacos ENSVPAG00000001644 I 0.826
nr5a2 Oryzias latipes ENSORLG00000006933 I 0.826
ENSOARG00000015980 Ovis aries ENSOARG00000015980 I 0.826
NR5A2 Gallus gallus ENSGALG00000002182 I 0.826
nr5a2 Xenopus tropicalis XB-GENE-478074 I 0.826
ENSGMOG00000001147 Gadus morhua ENSGMOG00000001147 I 0.826
ENSAMXG00000017580 Astyanax mexicanus ENSAMXG00000017580 I 0.826
Nr5a2 Dipodomys ordii ENSDORG00000006587 I 0.826
NR5A2 Callithrix jacchus ENSCJAG00000005055 I 0.826
NR5A2 Equus caballus ENSECAG00000015418 I 0.826
nr5a2 Danio rerio ENSDARG00000100940 I 0.826
ENSAPLG00000009302 Anas platyrhynchos ENSAPLG00000009302 I 0.826
NR5A2 Cavia porcellus ENSCPOG00000008775 I 0.826
NR5A2 Canis familiaris ENSCAFG00000011176 I 0.826
NR5A2 Bos taurus ENSBTAG00000009265 I 0.826
nr5a2.S Xenopus laevis XB-GENE-865139 I 0.826
nr5a2.L Xenopus laevis XB-GENE-6253894 I 0.826
ENSCSAG00000013702 Chlorocebus sabaeus ENSCSAG00000013702 I 0.826
NR5A2 Anolis carolinensis ENSACAG00000006301 I 0.826
ENSAMEG00000012650 Ailuropoda melanoleuca ENSAMEG00000012650 I 0.826
Pvit_14620 Pogona vitticeps Pvit_14620 I 0.826
NR5A2 Erinaceus europaeus ENSEEUG00000012910 I 0.826
Ogr01460 Ophisaurus gracilis Ogr01460 I 0.826
NR5A2 Taeniopygia guttata ENSTGUG00000004419 I 0.826
Myotis_brandtii_NR5A2_10008254 Myotis brandtii Myotis_brandtii_NR5A2_10008254 I 0.826
NR5A2 Gorilla gorilla ENSGGOG00000010226 I 0.826
nr5a2 Gasterosteus aculeatus ENSGACG00000008896 I 0.826
Tal_R009713 Tyto alba Tal_R009713 I 0.826
NR5A2 Felis catus ENSFCAG00000012604 I 0.826
ENSFALG00000002716 Ficedula albicollis ENSFALG00000002716 I 0.826
NR5A2 Homo sapiens ENSG00000116833 D 0.826
NR5A2 Echinops telfairi ENSETEG00000003796 I 0.826
BGLB002420 Biomphalaria glabrata BGLB002420 I 0.825
LotgiG196914 Lottia gigantea LotgiG196914 I 0.822
NR5A2 Dasypus novemcinctus ENSDNOG00000047241 I 0.822
CGI_10022774 Crassostrea gigas CGI_10022774 I 0.822
Nr5a2 Rattus norvegicus ENSRNOG00000000653 I 0.821
SPU_013843 Strongylocentrotus purpuratus SPU_013843 I 0.821
nr5a5 Gasterosteus aculeatus ENSGACG00000009952 I 0.821
Nr5a2 Mus musculus ENSMUSG00000026398 D 0.821
Sakowv30038453m.g Saccoglossus kowalevskii Sakowv30038453m.g I 0.821
ENSONIG00000001686 Oreochromis niloticus ENSONIG00000001686 I 0.820
ENSPFOG00000001645 Poecilia formosa ENSPFOG00000001645 I 0.820
DAPPUDRAFT_305379 Daphnia pulex DAPPUDRAFT_305379 I 0.817
nr5a5 Oryzias latipes ENSORLG00000006019 I 0.816
Ocbimv22038687m.g Octopus bimaculoides Ocbimv22038687m.g I 0.813
CapteG186691 Capitella teleta CapteG186691 I 0.813
Cmyd_10020218 Chelonia mydas Cmyd_10020218 I 0.812
nr5a1 Xenopus tropicalis XB-GENE-485361 I 0.812
nr5a1.L Xenopus laevis XB-GENE-865523 I 0.812
ENSSHAG00000016609 Sarcophilus harrisii ENSSHAG00000016609 I 0.812
ENSAMXG00000019765 Astyanax mexicanus ENSAMXG00000019765 I 0.812
NR5A1 Gallus gallus ENSGALG00000001080 I 0.812
NR5A1 Monodelphis domestica ENSMODG00000019746 I 0.812
ENSFALG00000002130 Ficedula albicollis ENSFALG00000002130 I 0.812
nr5a5 Tetraodon nigroviridis ENSTNIG00000018557 I 0.807
ENSXMAG00000002420 Xiphophorus maculatus ENSXMAG00000002420 I 0.805
GJ13743 Drosophila virilis FBgn0200964 I 0.804
GD12327 Drosophila simulans FBgn0184059 I 0.804
GK10750 Drosophila willistoni FBgn0212762 I 0.804
GM14921 Drosophila sechellia FBgn0169842 I 0.804
GL25259 Drosophila persimilis FBgn0162843 I 0.804
GI13962 Drosophila mojavensis FBgn0136716 I 0.804
L798_15156 Zootermopsis nevadensis L798_15156 I 0.804
TC002550 Tribolium castaneum TC002550 I 0.804
LCUP007669 Lucilia cuprina LCUP007669 I 0.804
MDOA003989 Musca domestica MDOA003989 I 0.804
GH17194 Drosophila grimshawi FBgn0124664 I 0.804
GB42142 Apis mellifera GB42142 I 0.804
GE22055 Drosophila yakuba FBgn0239287 I 0.804
PHUM475850 Pediculus humanus PHUM475850 I 0.804
GG15724 Drosophila erecta FBgn0107968 I 0.804
GA17924 Drosophila pseudoobscura FBgn0077933 I 0.804
ftz-f1 Drosophila melanogaster FBgn0001078 D 0.804
GF10806 Drosophila ananassae FBgn0087846 I 0.804
ASTEI02251 Anopheles stephensi ASTEI02251 I 0.803
ACOM038853 Anopheles coluzzii ACOM038853 I 0.803
ADIR006902 Anopheles dirus ADIR006902 I 0.803
AEPI006447 Anopheles epiroticus AEPI006447 I 0.803
AFAF020685 Anopheles farauti AFAF020685 I 0.803
AFUN015735 Anopheles funestus AFUN015735 I 0.803
ADAC008377 Anopheles darlingi ADAC008377 I 0.803
AMIN010170 Anopheles minimus AMIN010170 I 0.803
CpipJ_CPIJ008216 Culex pipiens CpipJ_CPIJ008216 I 0.803
BETAFTZF1 Aedes aegypti AAEL002062 I 0.803
CPIJ008216 Culex quinquefasciatus CPIJ008216 I 0.803
AATE004171 Anopheles atroparvus AATE004171 I 0.803
AMEM007731 Anopheles merus AMEM007731 I 0.803
AGAP005661 Anopheles gambiae AGAP005661 I 0.803
AARA005739 Anopheles arabiensis AARA005739 I 0.803
AQUA011201 Anopheles quadriannulatus AQUA011201 I 0.803
ACUA018233 Anopheles culicifacies ACUA018233 I 0.803
AALB005825 Anopheles albimanus AALB005825 I 0.803
AMEC020579 Anopheles melas AMEC020579 I 0.803
nr5a5 Danio rerio ENSDARG00000039116 I 0.800
nRc.2.0.1.g20333 Romanomermis culicivorax nRc.2.0.1.g20333 I 0.795
ENSAMXG00000017630 Astyanax mexicanus ENSAMXG00000017630 I 0.794
nr5a1a Gasterosteus aculeatus ENSGACG00000018317 I 0.777
ENSXMAG00000007526 Xiphophorus maculatus ENSXMAG00000007526 I 0.774
ENSPFOG00000003412 Poecilia formosa ENSPFOG00000003412 I 0.774
ENSLOCG00000007039 Lepisosteus oculatus ENSLOCG00000007039 I 0.773
nr5a5 Takifugu rubripes ENSTRUG00000003884 I 0.770
ISCW020376 Ixodes scapularis ISCW020376 I 0.770
SMAR006163 Strigamia maritima SMAR006163 I 0.770
tetur08g06490 Tetranychus urticae tetur08g06490 I 0.770
ENSP00000362690-D1 Bos grunniens ENSP00000362690-D1 I 0.767
ENSPPYG00000019599 Pongo abelii ENSPPYG00000019599 I 0.767
NR5A1 Bos taurus ENSBTAG00000009017 I 0.767
ENSSTOG00000000396 Ictidomys tridecemlineatus ENSSTOG00000000396 I 0.767
ENSCSAG00000013558 Chlorocebus sabaeus ENSCSAG00000013558 I 0.767
NR5A1 Callithrix jacchus ENSCJAG00000006624 I 0.767
NR5A1 Ochotona princeps ENSOPRG00000016678 I 0.767
NR5A1 Tursiops truncatus ENSTTRG00000017390 I 0.767
ENSAMEG00000011166 Ailuropoda melanoleuca ENSAMEG00000011166 I 0.767
NR5A1 Otolemur garnettii ENSOGAG00000017023 I 0.767
NR5A1 Oryctolagus cuniculus ENSOCUG00000007848 I 0.767
ENSNLEG00000017282 Nomascus leucogenys ENSNLEG00000017282 I 0.767
Nr5a1 Mus musculus ENSMUSG00000026751 D 0.767
NR5A1 Macaca mulatta ENSMMUG00000014111 I 0.767
NR5A1 Homo sapiens ENSG00000136931 D 0.767
Nr5a1 Rattus norvegicus ENSRNOG00000012682 I 0.767
NR5A1 Loxodonta africana ENSLAFG00000018557 I 0.767
NR5A1 Dasypus novemcinctus ENSDNOG00000040922 I 0.767
NR5A1 Erinaceus europaeus ENSEEUG00000003357 I 0.767
NR5A1 Gorilla gorilla ENSGGOG00000008994 I 0.767
ENSLOCG00000005158 Lepisosteus oculatus ENSLOCG00000005158 I 0.766
ENSXMAG00000004723 Xiphophorus maculatus ENSXMAG00000004723 I 0.766
nr5a1b Danio rerio ENSDARG00000023362 I 0.766
nr5a1 Oryzias latipes ENSORLG00000016486 I 0.766
ENSPFOG00000023617 Poecilia formosa ENSPFOG00000023617 I 0.766
NR5A1 Tetraodon nigroviridis ENSTNIG00000010588 I 0.766
NR5A1 Takifugu rubripes ENSTRUG00000008874 I 0.766
ENSGMOG00000009375 Gadus morhua ENSGMOG00000009375 I 0.766
ENSONIG00000020218 Oreochromis niloticus ENSONIG00000020218 I 0.766
NR5A1 Gasterosteus aculeatus ENSGACG00000003539 I 0.766
nr5a1a Danio rerio ENSDARG00000103176 I 0.766
ENSGMOG00000009190 Gadus morhua ENSGMOG00000009190 I 0.761
ACYPI006350 Acyrthosiphon pisum ACYPI006350 I 0.759
ACYPI003708 Acyrthosiphon pisum ACYPI003708 I 0.758
HHAL006554-PA Halyomorpha halys HHAL006554-PA I 0.758
LDEC014511 Leptinotarsa decemlineata LDEC014511 I 0.758
CLEC025178 Cimex lectularius CLEC025178 I 0.758
BGIBMGA000716 Bombyx mori BGIBMGA000716 I 0.758
MCINX000753 Melitaea cinxia MCINX000753 I 0.758
NV18828 Nasonia vitripennis NV18828 I 0.758
KGM_10874 Danaus plexippus KGM_10874 I 0.758
YQE_06807 Dendroctonus ponderosae YQE_06807 I 0.758
RPRC014120 Rhodnius prolixus RPRC014120 I 0.758
HMEL008775 Heliconius melpomene HMEL008775 I 0.758
PTRK_0000026300 Parastrongyloides trichosuri PTRK_0000026300 I 0.753
RSKR_0000016900 Rhabditophanes kr3021 RSKR_0000016900 I 0.752