CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ALUE_0001619401
(
Ascaris lumbricoides
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
ALUE_0001619401
T307952_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0001619401-mRNA-1
Nuclear receptor
56
110
RRCAVCGDSPAKIHYGVFACFGCKGFFRRAVKDGCNRYVCRYDRKCNVDKCKDSV
Links
Other
Nuclear receptor
family TFs
Other
Ascaris lumbricoides
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PEQ_0000633601
Parascaris equorum
PEQ_0000633601
I
0.869
SMUV_0000859101
Syphacia muris
SMUV_0000859101
I
0.795
EVEC_0000349901
Enterobius vermicularis
EVEC_0000349901
I
0.792
SVE_0137800
Strongyloides venezuelensis
SVE_0137800
I
0.791
SSTP_0001234400
Strongyloides stercoralis
SSTP_0001234400
I
0.791
SPAL_0000110800
Strongyloides papillosus
SPAL_0000110800
I
0.791
TCNE_0001063401
Toxocara canis
TCNE_0001063401
N
0.779
scaffold601-EXSNAP2012.18
Pristionchus exspectatus
scaffold601-EXSNAP2012.18
N
0.757