CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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augustus_masked-nMf.1.1.scaf04518-processed-gene-0.1
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
augustus_masked-nMf.1.1.scaf04518-processed-gene-0.1
T308201_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf04518-processed-gene-0.1-mRNA-1
Nuclear receptor
24
93
PKCLVCGQENPKMHYGVLACLGCKGFFRRALKKLNEYECFHNNNCIIDKNERTSCRACRLQKCLDVGMDP
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc15185
Meloidogyne incognita
Minc15185
N
0.993
MhA1_Contig795.frz3.fgene1
Meloidogyne hapla
MhA1_Contig795.frz3.fgene1
N
0.972
BXY_0740200
Bursaphelenchus xylophilus
BXY_0740200
N
0.873
L893_g27196
Steinernema glaseri
L893_g27196
I
0.745
L596_g3812
Steinernema carpocapsae
L596_g3812
I
0.745
L889_g6303
Steinernema feltiae
L889_g6303
I
0.745