GPLIN_000268400 (Globodera pallida)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 GPLIN_000268400 T308664_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-7
M00689_2.00
Caenorhabditis elegans
WAAGAYCAN

NTGRTCTTW
PBM
Narasimhan et al.(2015)
pTH10645
0.869 0.600
nhr-3
M00687_2.00
Caenorhabditis elegans
NNHGDHYANN

NNTRDHCDNN
PBM
Narasimhan et al.(2015)
pTH9163
0.824 0.586
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000268400 Nuclear receptor 58 127

Links

Other Nuclear receptor family TFs
Other Globodera pallida TFs

174 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I 0.824
nAv.1.0.1.g01698 Acanthocheilonema viteae nAv.1.0.1.g01698 I 0.848
ANCCAN_03474 Ancylostoma caninum ANCCAN_03474 I 0.942
ANCCAN_12539 Ancylostoma caninum ANCCAN_12539 I 0.848
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I 0.824
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I 0.987
ANCCEY_05105 Ancylostoma ceylanicum ANCCEY_05105 I 0.856
ANCDUO_24681 Ancylostoma duodenale ANCDUO_24681 N 0.768
ACAC_0001180201 Angiostrongylus cantonensis ACAC_0001180201 I 0.848
ACAC_0000409401 Angiostrongylus cantonensis ACAC_0000409401 I 0.890
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I 0.987
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I 0.987
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I 0.791
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.979
ASIM_0001301101 Anisakis simplex ASIM_0001301101 I 0.855
ASU_01199 Ascaris suum ASU_01199 I 0.891
ASU_04305 Ascaris suum ASU_04305 I 0.948
ASU_09451 Ascaris suum ASU_09451 N 0.826
ASU_10946 Ascaris suum ASU_10946 I 0.824
Bm12053 Brugia malayi Bm12053 I 0.848
Bm14724 Brugia malayi Bm14724 I 0.824
Bm2389 Brugia malayi Bm2389 I 0.948
Bm4894 Brugia malayi Bm4894 I 0.848
BTMF_0000273701 Brugia timori BTMF_0000273701 I 0.824
BTMF_0001198801 Brugia timori BTMF_0001198801 I 0.848
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.994
BXY_1595900 Bursaphelenchus xylophilus BXY_1595900 I 0.764
BXY_0740100 Bursaphelenchus xylophilus BXY_0740100 I 0.939
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I 0.870
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I 0.921
CBN07936 Caenorhabditis brenneri CBN07936 I 0.817
CBN13729 Caenorhabditis brenneri CBN13729 I 0.851
CBN18797 Caenorhabditis brenneri CBN18797 I 0.902
CBN19233 Caenorhabditis brenneri CBN19233 I 0.827
CBN26258 Caenorhabditis brenneri CBN26258 I 0.902
CBN20828 Caenorhabditis brenneri CBN20828 I 0.817
CBN25890 Caenorhabditis brenneri CBN25890 N 0.963
CBN31048 Caenorhabditis brenneri CBN31048 I 0.987
CBG19594 Caenorhabditis briggsae CBG19594 I 0.987
CBG07552 Caenorhabditis briggsae CBG07552 I 0.824
CBG19604 Caenorhabditis briggsae CBG19604 I 0.820
CBG06052 Caenorhabditis briggsae CBG06052 I 0.869
CBG17744 Caenorhabditis briggsae CBG17744 I 0.957
nhr-31 Caenorhabditis elegans WBGene00003625 I 0.944
nhr-3 Caenorhabditis elegans WBGene00003602 D 0.824
nhr-119 Caenorhabditis elegans WBGene00003709 I 0.989
nhr-88 Caenorhabditis elegans WBGene00003678 I 0.817
nhr-7 Caenorhabditis elegans WBGene00003606 D 0.869
CJA13646 Caenorhabditis japonica CJA13646 I 0.840
CJA04720 Caenorhabditis japonica CJA04720 I 0.820
CJA08328 Caenorhabditis japonica CJA08328 I 0.945
CRE02711 Caenorhabditis remanei CRE02711 I 0.944
CRE06661 Caenorhabditis remanei CRE06661 I 0.987
CRE06667 Caenorhabditis remanei CRE06667 I 0.817
CRE10161 Caenorhabditis remanei CRE10161 I 0.944
CRE12779 Caenorhabditis remanei CRE12779 I 0.864
CRE15289 Caenorhabditis remanei CRE15289 I 0.824
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I 0.987
DICVIV_10822 Dictyocaulus viviparus DICVIV_10822 I 0.942
DICVIV_11945 Dictyocaulus viviparus DICVIV_11945 I 0.881
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I 0.824
nDi.2.2.2.g02781 Dirofilaria immitis nDi.2.2.2.g02781 I 0.848
nDi.2.2.2.g03563 Dirofilaria immitis nDi.2.2.2.g03563 I 0.945
DME_0000188101 Dracunculus medinensis DME_0000188101 I 0.948
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.991
DME_0000960901 Dracunculus medinensis DME_0000960901 I 0.845
EVEC_0000733201 Enterobius vermicularis EVEC_0000733201 N 0.929
EVEC_0001115901 Enterobius vermicularis EVEC_0001115901 I 0.955
GPLIN_001106000 Globodera pallida GPLIN_001106000 I 0.933
GPLIN_000669000 Globodera pallida GPLIN_000669000 I 0.871
GPUH_0000393501 Gongylonema pulchrum GPUH_0000393501 I 0.848
HCOI00769300 Haemonchus contortus HCOI00769300 I 0.987
HCOI02077900 Haemonchus contortus HCOI02077900 I 0.824
HCOI01268300 Haemonchus contortus HCOI01268300 I 0.820
HCOI01406200 Haemonchus contortus HCOI01406200 I 0.987
HCOI00435200 Haemonchus contortus HCOI00435200 I 0.896
HCOI01716000 Haemonchus contortus HCOI01716000 I 0.942
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I 0.987
HPLM_0001092501 Haemonchus placei HPLM_0001092501 I 0.942
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I 0.987
Hba_14163 Heterorhabditis bacteriophora Hba_14163 I 0.848
Hba_06510 Heterorhabditis bacteriophora Hba_06510 I 0.947
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I 0.986
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I 0.826
nLs.2.1.2.g08709 Litomosoides sigmodontis nLs.2.1.2.g08709 I 0.848
LOAG_01074 Loa loa LOAG_01074 I 0.948
LOAG_05485 Loa loa LOAG_05485 I 0.848
LOAG_18352 Loa loa LOAG_18352 I 0.824
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I 0.877
genemark-nMf.1.1.scaf00140-processed-gene-0.6 Meloidogyne floridensis genemark-nMf.1.1.scaf00140-processed-gene-0.6 I 0.986
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 I 0.832
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.877
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.877
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.995
Minc01725 Meloidogyne incognita Minc01725 I 0.877
Minc13525 Meloidogyne incognita Minc13525 I 0.877
Minc15420 Meloidogyne incognita Minc15420 I 0.832
NECAME_04545 Necator americanus NECAME_04545 I 0.824
NECAME_05125 Necator americanus NECAME_05125 I 0.848
NECAME_12696 Necator americanus NECAME_12696 I 0.987
NBR_0001013001 Nippostrongylus brasiliensis NBR_0001013001 I 0.942
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I 0.989
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I 0.820
OESDEN_17109 Oesophagostomum dentatum OESDEN_17109 I 0.848
OESDEN_12257 Oesophagostomum dentatum OESDEN_12257 I 0.942
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I 0.987
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I 0.824
OFLC_0001511801 Onchocerca flexuosa OFLC_0001511801 I 0.848
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I 0.824
nOo.2.0.1.g04046 Onchocerca ochengi nOo.2.0.1.g04046 I 0.848
nOo.2.0.1.g02048 Onchocerca ochengi nOo.2.0.1.g02048 N 0.882
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I 0.824
WBGene00248075 Onchocerca volvulus WBGene00248075 I 0.848
WBGene00241910 Onchocerca volvulus WBGene00241910 I 0.824
WBGene00241236 Onchocerca volvulus WBGene00241236 I 0.923
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I 0.922
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.989
PTRK_0000497300 Parastrongyloides trichosuri PTRK_0000497300 I 0.925
PTRK_0000207700 Parastrongyloides trichosuri PTRK_0000207700 I 0.942
PTRK_0000775900 Parastrongyloides trichosuri PTRK_0000775900 I 0.848
scaffold601-EXSNAP2012.19 Pristionchus exspectatus scaffold601-EXSNAP2012.19 I 0.947
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.847
Ppa-nhr-31 Pristionchus pacificus PPA24219 I 0.947
PPA21285 Pristionchus pacificus PPA21285 I 0.847
PPA20304 Pristionchus pacificus PPA20304 I 0.841
RSKR_0000832300 Rhabditophanes kr3021 RSKR_0000832300 I 0.923
RSKR_0000868400 Rhabditophanes kr3021 RSKR_0000868400 N 0.961
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.921
L596_g3812 Steinernema carpocapsae L596_g3812 I 0.791
L596_g3809 Steinernema carpocapsae L596_g3809 I 0.953
L596_g27086 Steinernema carpocapsae L596_g27086 I 0.848
L596_g25666 Steinernema carpocapsae L596_g25666 I 0.822
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.991
L889_g5777 Steinernema feltiae L889_g5777 I 0.930
L889_g29204 Steinernema feltiae L889_g29204 I 0.845
L889_g6303 Steinernema feltiae L889_g6303 I 0.791
L889_g8361 Steinernema feltiae L889_g8361 I 0.991
L889_g8621 Steinernema feltiae L889_g8621 I 0.953
L893_g27196 Steinernema glaseri L893_g27196 I 0.791
L893_g27201 Steinernema glaseri L893_g27201 I 0.953
L893_g29388 Steinernema glaseri L893_g29388 I 0.921
L893_g29555 Steinernema glaseri L893_g29555 I 0.824
L893_g32432 Steinernema glaseri L893_g32432 I 0.947
L893_g6878 Steinernema glaseri L893_g6878 I 0.817
L898_g24498 Steinernema monticolum L898_g24498 I 0.921
L898_g10316 Steinernema monticolum L898_g10316 I 0.991
L898_g23965 Steinernema monticolum L898_g23965 I 0.787
L898_g2799 Steinernema monticolum L898_g2799 I 0.953
L898_g4801 Steinernema monticolum L898_g4801 I 0.845
L892_g21738 Steinernema scapterisci L892_g21738 I 0.779
L892_g650 Steinernema scapterisci L892_g650 I 0.822
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.989
SPAL_0001157400 Strongyloides papillosus SPAL_0001157400 I 0.848
SPAL_0000620000 Strongyloides papillosus SPAL_0000620000 I 0.878
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.957
SSTP_0000662400 Strongyloides stercoralis SSTP_0000662400 I 0.878
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.957
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I 0.989
SSTP_0000217700 Strongyloides stercoralis SSTP_0000217700 I 0.848
SVE_1633700 Strongyloides venezuelensis SVE_1633700 I 0.848
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.989
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.957
SVE_1965700 Strongyloides venezuelensis SVE_1965700 I 0.878
SMUV_0000859101 Syphacia muris SMUV_0000859101 I 0.934
SMUV_0000212501 Syphacia muris SMUV_0000212501 I 0.955
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.828
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I 0.987
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I 0.824
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I 0.987
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I 0.824
TCLT_0000173501 Thelazia callipaeda TCLT_0000173501 I 0.848
TCNE_0001780601 Toxocara canis TCNE_0001780601 I 0.824
WUBG_08518 Wuchereria bancrofti WUBG_08518 I 0.824
WUBG_10752 Wuchereria bancrofti WUBG_10752 I 0.848