SSTP_0001272200 (Strongyloides stercoralis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SSTP_0001272200 T310629_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hr96
M03940_2.00
Drosophila melanogaster
YVRGTRCANVTGYACYBR

YVRGTRCABNTGYACYBR
SELEX
Nitta et al.(2015)
Hr96_1
0.852 0.657
daf-12
M00685_2.00
Caenorhabditis elegans
NDAGTRCANN

NNTGYACTHN
PBM
Narasimhan et al.(2015)
pTH9108
0.828 0.757
daf-12
M08159_2.00
Caenorhabditis elegans
GWGYGYGYKTGYDKB

VMHRCAMRCRCRCWC
ChIP-seq
Mathelier et al.(2014)
MA0538.1
0.828 0.757
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SSTP_0001272200.1 Nuclear receptor 46 115

Links

Other Nuclear receptor family TFs
Other Strongyloides stercoralis TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bostr.20129s0005 Boechera stricta Bostr.20129s0005 N 0.000
Cagra.0799s0042 Capsella grandiflora Cagra.0799s0042 N 0.000
Carubv10020159m.g Capsella rubella Carubv10020159m.g N 0.000
Ciclev10001255m.g Citrus clementina Ciclev10001255m.g N 0.000
Eucgr.F01643 Eucalyptus grandis Eucgr.F01643 N 0.000
fgenesh2_kg.2__1849__AT1G75710.1 Arabidopsis lyrata fgenesh2_kg.2__1849__AT1G75710.1 N 0.000