SNAPOd2T00015161001 (Oikopleura dioica)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 SNAPOd2T00015161001 T312266_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX1
M03442_2.00 		Homo sapiens
DBCANTSAWGCGTGACS
SGTCACGCWTSANTGVH		 SELEX
Jolma et al.(2013)
PAX1_1 		0.719 0.719
PAX9
M03444_2.00 		Homo sapiens
NKCANTSAWGCGTGACS
SGTCACGCWTSANTGMN		 SELEX
Jolma et al.(2013)
PAX9_1 		0.719 0.719
PAX1
M05687_2.00 		Homo sapiens
BCRNTSRWGCGTGACSN
NSGTCACGCWYSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_HT-SELEX 		0.719 0.719
PAX9
M05689_2.00 		Homo sapiens
BHRNYSRDSCGTRACSN
NSGTYACGSHYSRNYDV		 SELEX
Yin et al.(2017)
PAX9_eDBD_HT-SELEX 		0.719 0.719
PAX1
M11207_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX1_B 		0.719 0.719
pax9
M11204_2.00 		Danio rerio Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX9_B 		0.719 0.719
PAX1
M05688_2.00 		Homo sapiens
BCRNTSAWGCGTGACSN
NSGTCACGCWTSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_Methyl-HT-SELEX 		0.719 0.719
PAX9
M05690_2.00 		Homo sapiens
BCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGV		 SELEX
Yin et al.(2017)
PAX9_eDBD_Methyl-HT-SELEX 		0.719 0.719
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00015161001 Paired box 1 32

Links

Other Paired box family TFs
Other Oikopleura dioica TFs

172 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L596_g23601 Steinernema carpocapsae L596_g23601 I 0.812
EVEC_0000163101 Enterobius vermicularis EVEC_0000163101 I 0.781
L889_g19368 Steinernema feltiae L889_g19368 I 0.781
AFUN001734 Anopheles funestus AFUN001734 I 0.750
ENSSSCG00000016229 Sus scrofa ENSSSCG00000016229 I 0.750
AMAM000649 Anopheles maculatus AMAM000649 I 0.750
AMEC017516 Anopheles melas AMEC017516 I 0.750
AMIN005066 Anopheles minimus AMIN005066 I 0.750
AMEM000130 Anopheles merus AMEM000130 I 0.750
AFAF006072 Anopheles farauti AFAF006072 I 0.750
Sakowv30044183m.g Saccoglossus kowalevskii Sakowv30044183m.g I 0.750
AATE019429 Anopheles atroparvus AATE019429 I 0.750
AARA001070 Anopheles arabiensis AARA001070 I 0.750
ADIR000995 Anopheles dirus ADIR000995 I 0.750
AEPI005638 Anopheles epiroticus AEPI005638 I 0.750
AQUA002471 Anopheles quadriannulatus AQUA002471 I 0.750
AALB006349 Anopheles albimanus AALB006349 I 0.750
ACUA000500 Anopheles culicifacies ACUA000500 I 0.750
PEQ_0000430901 Parascaris equorum PEQ_0000430901 I 0.750
L898_g3148 Steinernema monticolum L898_g3148 I 0.750
SMUV_0000337801 Syphacia muris SMUV_0000337801 I 0.750
TCNE_0001785701 Toxocara canis TCNE_0001785701 I 0.750
ADAC006866 Anopheles darlingi ADAC006866 I 0.750
ASIS022893 Anopheles sinensis ASIS022893 I 0.750
L893_g11572 Steinernema glaseri L893_g11572 I 0.750
AGAP001493 Anopheles gambiae AGAP001493 I 0.750
ASTEI07741 Anopheles stephensi ASTEI07741 I 0.750
PAX9 Taeniopygia guttata ENSTGUG00000012015 I 0.719
ENSTNIG00000002104 Tetraodon nigroviridis ENSTNIG00000002104 I 0.719
ENSTGUG00000007526 Taeniopygia guttata ENSTGUG00000007526 I 0.719
PAX9 Tupaia belangeri ENSTBEG00000002460 I 0.719
ENSSTOG00000003000 Ictidomys tridecemlineatus ENSSTOG00000003000 I 0.719
ENSSTOG00000015730 Ictidomys tridecemlineatus ENSSTOG00000015730 I 0.719
pax1a Tetraodon nigroviridis ENSTNIG00000016891 I 0.719
pax9 Tetraodon nigroviridis ENSTNIG00000019284 I 0.719
ENSXMAG00000019114 Xiphophorus maculatus ENSXMAG00000019114 I 0.719
GB52620 Apis mellifera GB52620 I 0.719
ENSXMAG00000015762 Xiphophorus maculatus ENSXMAG00000015762 I 0.719
PAX1 Tursiops truncatus ENSTTRG00000002444 I 0.719
pax9 Takifugu rubripes ENSTRUG00000011965 I 0.719
pax1a Takifugu rubripes ENSTRUG00000008079 I 0.719
PAX1 Sus scrofa ENSSSCG00000007112 I 0.719
PAX9 Pan troglodytes ENSPTRG00000006281 I 0.719
PAX1 Pan troglodytes ENSPTRG00000013311 I 0.719
ENSPPYG00000010758 Pongo abelii ENSPPYG00000010758 I 0.719
ENSPPYG00000005755 Pongo abelii ENSPPYG00000005755 I 0.719
HMEL004481 Heliconius melpomene HMEL004481 I 0.719
ENSPMAG00000010414 Petromyzon marinus ENSPMAG00000010414 I 0.719
PAX1 Pteropus vampyrus ENSPVAG00000002604 I 0.719
Pax9 Rattus norvegicus ENSRNOG00000008826 I 0.719
ENSSHAG00000017556 Sarcophilus harrisii ENSSHAG00000017556 I 0.719
ENSSSCG00000001943 Sus scrofa ENSSSCG00000001943 I 0.719
ENSSHAG00000005531 Sarcophilus harrisii ENSSHAG00000005531 I 0.719
ENSPSIG00000010961 Pelodiscus sinensis ENSPSIG00000010961 I 0.719
PAX9 Sorex araneus ENSSARG00000000337 I 0.719
ENSPMAG00000010308 Petromyzon marinus ENSPMAG00000010308 I 0.719
ENSP00000381499 Macaca fascicularis ENSP00000381499 I 0.719
HHAL005838-PA Halyomorpha halys HHAL005838-PA I 0.719
pax9 Xenopus tropicalis XB-GENE-482238 I 0.719
Ocbimv22010462m.g Octopus bimaculoides Ocbimv22010462m.g I 0.719
Pvit_17942 Pogona vitticeps Pvit_17942 I 0.719
Ogr18451 Ophisaurus gracilis Ogr18451 I 0.719
Ogr19508 Ophisaurus gracilis Ogr19508 I 0.719
pax1 Xenopus tropicalis XB-GENE-487951 I 0.719
pax9.L Xenopus laevis XB-GENE-864845 I 0.719
PPAI009002 Phlebotomus papatasi PPAI009002 I 0.719
GPLIN_000205200 Globodera pallida GPLIN_000205200 I 0.719
LLOJ004809 Lutzomyia longipalpis LLOJ004809 I 0.719
LLOJ004808 Lutzomyia longipalpis LLOJ004808 I 0.719
pax1.S Xenopus laevis XB-GENE-865751 I 0.719
BGLB008429 Biomphalaria glabrata BGLB008429 I 0.719
Gfo_R012945 Geospiza fortis Gfo_R012945 I 0.719
ENSP00000384817-D1 Bos grunniens ENSP00000384817-D1 I 0.719
SMAR007866 Strigamia maritima SMAR007866 I 0.719
YQE_12494 Dendroctonus ponderosae YQE_12494 I 0.719
SINV15629 Solenopsis invicta SINV15629 I 0.719
NV11293 Nasonia vitripennis NV11293 I 0.719
LotgiG161614 Lottia gigantea LotgiG161614 I 0.719
MESCA000012 Megaselia scalaris MESCA000012 I 0.719
Aan_R005718 Calypte anna Aan_R005718 I 0.719
Afo_R004464 Aptenodytes forsteri Afo_R004464 I 0.719
ENSP00000355245 Macaca fascicularis ENSP00000355245 I 0.719
ENSPFOG00000017550 Poecilia formosa ENSPFOG00000017550 I 0.719
ENSBTAP00000008861-D1 Bos grunniens ENSBTAP00000008861-D1 I 0.719
Cflo_08772--XP_001121954.1_APIME Camponotus floridanus Cflo_08772--XP_001121954.1_APIME I 0.719
Alligator_sinensis_CCG004503.1 Alligator sinensis Alligator_sinensis_CCG004503.1 I 0.719
KGM_09724 Danaus plexippus KGM_09724 I 0.719
PAX1 Procavia capensis ENSPCAG00000003556 I 0.719
Pax1 Dipodomys ordii ENSDORG00000016051 I 0.719
PAX9 Equus caballus ENSECAG00000023712 I 0.719
PAX1 Erinaceus europaeus ENSEEUG00000007846 I 0.719
PAX9 Echinops telfairi ENSETEG00000002086 I 0.719
PAX1 Dasypus novemcinctus ENSDNOG00000033546 I 0.719
PAX9 Dasypus novemcinctus ENSDNOG00000000352 I 0.719
pax1a Danio rerio ENSDARG00000008203 I 0.719
pax9 Danio rerio ENSDARG00000053829 D 0.719
pax1b Danio rerio ENSDARG00000073814 I 0.719
ENSFALG00000006155 Ficedula albicollis ENSFALG00000006155 I 0.719
PAX9 Felis catus ENSFCAG00000001024 I 0.719
PAX9 Gallus gallus ENSGALG00000010114 I 0.719
ENSGALG00000028576 Gallus gallus ENSGALG00000028576 I 0.719
PAX9 Gorilla gorilla ENSGGOG00000001528 I 0.719
PAX1 Gorilla gorilla ENSGGOG00000016075 I 0.719
pax9 Gasterosteus aculeatus ENSGACG00000011298 I 0.719
pax1a Gasterosteus aculeatus ENSGACG00000006987 I 0.719
PAX1 Felis catus ENSFCAG00000004293 I 0.719
PAX1 Homo sapiens ENSG00000125813 D 0.719
PAX9 Homo sapiens ENSG00000198807 D 0.719
ENSCSAG00000015463 Chlorocebus sabaeus ENSCSAG00000015463 I 0.719
ENSCSAG00000011068 Chlorocebus sabaeus ENSCSAG00000011068 I 0.719
ENSAMXG00000002161 Astyanax mexicanus ENSAMXG00000002161 I 0.719
ENSAMXG00000008583 Astyanax mexicanus ENSAMXG00000008583 I 0.719
ENSAMXG00000018287 Astyanax mexicanus ENSAMXG00000018287 I 0.719
ENSAPLG00000012856 Anas platyrhynchos ENSAPLG00000012856 I 0.719
ENSAMEG00000012642 Ailuropoda melanoleuca ENSAMEG00000012642 I 0.719
ENSAMEG00000002906 Ailuropoda melanoleuca ENSAMEG00000002906 I 0.719
BGIBMGA000787 Bombyx mori BGIBMGA000787 I 0.719
ENSACAG00000001481 Anolis carolinensis ENSACAG00000001481 I 0.719
ENSACAG00000010563 Anolis carolinensis ENSACAG00000010563 I 0.719
ENSAPLG00000014321 Anas platyrhynchos ENSAPLG00000014321 I 0.719
PAX1 Bos taurus ENSBTAG00000006742 I 0.719
PAX9 Callithrix jacchus ENSCJAG00000016460 I 0.719
PAX1 Cavia porcellus ENSCPOG00000002886 I 0.719
PAX9 Cavia porcellus ENSCPOG00000010951 I 0.719
PAX1 Callithrix jacchus ENSCJAG00000005773 I 0.719
ENSCING00000024971 Ciona intestinalis ENSCING00000024971 I 0.719
PAX9 Bos taurus ENSBTAG00000009186 I 0.719
PAX1 Canis familiaris ENSCAFG00000005170 I 0.719
PAX9 Canis familiaris ENSCAFG00000013690 I 0.719
ENSGMOG00000003366 Gadus morhua ENSGMOG00000003366 I 0.719
ENSGMOG00000009128 Gadus morhua ENSGMOG00000009128 I 0.719
ENSOARG00000004951 Ovis aries ENSOARG00000004951 I 0.719
ENSOARG00000008050 Ovis aries ENSOARG00000008050 I 0.719
PAX1 Oryctolagus cuniculus ENSOCUG00000003276 I 0.719
PAX9 Oryctolagus cuniculus ENSOCUG00000014321 I 0.719
PAX9 Ornithorhynchus anatinus ENSOANG00000014065 I 0.719
PAX1 Ornithorhynchus anatinus ENSOANG00000002008 I 0.719
Pax1 Mus musculus ENSMUSG00000037034 I 0.719
ENSNLEG00000003346 Nomascus leucogenys ENSNLEG00000003346 I 0.719
ENSNLEG00000010049 Nomascus leucogenys ENSNLEG00000010049 I 0.719
ENSOGAG00000013131 Otolemur garnettii ENSOGAG00000013131 I 0.719
PAX1 Otolemur garnettii ENSOGAG00000033162 I 0.719
ENSPANG00000000932 Papio anubis ENSPANG00000000932 I 0.719
ENSPANG00000008282 Papio anubis ENSPANG00000008282 I 0.719
ACYPI005583 Acyrthosiphon pisum ACYPI005583 I 0.719
pax1 Oryzias latipes ENSORLG00000017412 I 0.719
PAX1 Ochotona princeps ENSOPRG00000017249 I 0.719
ENSONIG00000000990 Oreochromis niloticus ENSONIG00000000990 I 0.719
ENSONIG00000008137 Oreochromis niloticus ENSONIG00000008137 I 0.719
ENSONIG00000018717 Oreochromis niloticus ENSONIG00000018717 I 0.719
Pax9 Mus musculus ENSMUSG00000001497 I 0.719
ENSMPUG00000016259 Mustela putorius furo ENSMPUG00000016259 I 0.719
ENSLOCG00000013992 Lepisosteus oculatus ENSLOCG00000013992 I 0.719
ENSLOCG00000016871 Lepisosteus oculatus ENSLOCG00000016871 I 0.719
ENSMEUG00000002095 Macropus eugenii ENSMEUG00000002095 I 0.719
ENSMEUG00000010140 Macropus eugenii ENSMEUG00000010140 I 0.719
PAX9 Loxodonta africana ENSLAFG00000017541 I 0.719
ENSLACG00000015921 Latimeria chalumnae ENSLACG00000015921 I 0.719
ENSGMOG00000017053 Gadus morhua ENSGMOG00000017053 I 0.719
ENSGMOG00000018913 Gadus morhua ENSGMOG00000018913 I 0.719
ENSLACG00000009610 Latimeria chalumnae ENSLACG00000009610 I 0.719
PAX9 Meleagris gallopavo ENSMGAG00000012530 I 0.719
PAX9 Microcebus murinus ENSMICG00000010808 I 0.719
PAX1 Monodelphis domestica ENSMODG00000006198 I 0.719
PAX9 Monodelphis domestica ENSMODG00000012681 I 0.719
ENSMPUG00000001187 Mustela putorius furo ENSMPUG00000001187 I 0.719
PAX1 Macaca mulatta ENSMMUG00000019409 I 0.719
PAX9 Macaca mulatta ENSMMUG00000009648 I 0.719
PAX1 Microcebus murinus ENSMICG00000016968 I 0.719
PAX9 Myotis lucifugus ENSMLUG00000011407 I 0.719
PAX1 Myotis lucifugus ENSMLUG00000014710 I 0.719
ENSPFOG00000003208 Poecilia formosa ENSPFOG00000003208 I 0.719