CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
augustus_masked-nMf.1.1.scaf29399-processed-gene-0.0
(
Meloidogyne floridensis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
augustus_masked-nMf.1.1.scaf29399-processed-gene-0.0
T312552_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf29399-processed-gene-0.0-mRNA-1
Paired box
67
141
SGRGTNLYGRSYCPGRPLSMEERAKIIQLFHGGMKVNAISKQLCISHGCVSKIITRFRETGNLMPSSHSECRRRK
Links
Other
Paired box
family TFs
Other
Meloidogyne floridensis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MhA1_Contig221.frz3.gene6
Meloidogyne hapla
MhA1_Contig221.frz3.gene6
N
1.000
Minc18251
Meloidogyne incognita
Minc18251
N
0.987
GPLIN_001350800
Globodera pallida
GPLIN_001350800
N
0.973
BXY_0748700
Bursaphelenchus xylophilus
BXY_0748700
N
0.853
CJA36291
Caenorhabditis japonica
CJA36291
N
0.763
TCNE_0001343401
Toxocara canis
TCNE_0001343401
N
0.733
L889_g3780
Steinernema feltiae
L889_g3780
N
0.733
ALUE_0001621101
Ascaris lumbricoides
ALUE_0001621101
N
0.720
PTRK_0000752800
Parastrongyloides trichosuri
PTRK_0000752800
N
0.720
CRE10858
Caenorhabditis remanei
CRE10858
N
0.720
ASU_01558
Ascaris suum
ASU_01558
N
0.720