BTMF_0001750801 (Brugia timori)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 BTMF_0001750801 T312562_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Pax5B
M01301_2.00
Gallus gallus
NSNDTNNNN

NNNNAHNSN
PBM
Lambert et al.(2019)
pTH9781
0.880 0.880
PAX5
M03443_2.00
Homo sapiens
RNBYANYSAWSCGTRACN

NGTYACGSWTSRNTRVNY
SELEX
Jolma et al.(2013)
PAX5_1
0.880 0.880
PAX5
M08160_2.00
Homo sapiens
RDGCGTGACCNN

NNGGTCACGCHY
ChIP-seq
Mathelier et al.(2014)
MA0014.3
0.880 0.880
PAX5
M07995_2.00
Homo sapiens
BCAVYSRDSCRKRRC

GYYMYGSHYSRBTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha
0.880 0.880
PAX5
M07996_2.00
Homo sapiens
BCASYSRDSCRTRAC

GTYAYGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha
0.880 0.880
PAX5
M07997_2.00
Homo sapiens
CASYSRDSCRKRACN

NGTYMYGSHYSRSTG
ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha
0.880 0.880
PAX5
M07998_2.00
Homo sapiens
BCASYSRDSCGKRRC

GYYMCGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha
0.880 0.880
PAX5
M08227_2.00
Homo sapiens
BCANYSRDGCGTRAM

KTYACGCHYSRNTGV
ChIP-seq
Contrino et al.(2012)
Mv108
0.880 0.880
PAX5
M08228_2.00
Homo sapiens
AGCGTGRCYG

CRGYCACGCT
ChIP-seq
Contrino et al.(2012)
Mv109
0.880 0.880
PAX5
M09341_2.00
Homo sapiens
SNVDGNKCARCVRAGCRDGAC

GTCHYGCTYBGYTGMNCHBNS
Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A
0.880 0.880
Pax5
M09342_2.00
Mus musculus
VDRNBCAVYVRDSCRKRRM

KYYMYGSHYBRBTGVNYHB
Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A
0.880 0.880
PAX5
M09622_2.00
Homo sapiens
BCASYSRDSCRTGRMN

NKYCAYGSHYSRSTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1
0.880 0.880
PAX5
M09623_2.00
Homo sapiens
BCABNVRSCGTGAC

GTCACGSYBNVTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2
0.880 0.880
PAX5
M11208_2.00
Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB

VNDSYSKCYMYNCWNCVNTGMNYNNNGV
Transfac
Matys et al.(2006)
V$PAX5_01
0.880 0.880
PAX5
M11209_2.00
Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH

DBNRYBGTYMCGCTYNAVVHNHCHBDYB
Transfac
Matys et al.(2006)
V$PAX5_02
0.880 0.880
PAX5
M11210_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_06
0.880 0.880
PAX5
M11211_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_07
0.880 0.880
PAX5
M11212_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_Q6
0.880 0.880
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR

YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.860 0.860
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN

NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.860 0.860
PAX8
M05685_2.00
Homo sapiens
NRNBYRNYSRWGCGTGACSN

NSGTCACGCWYSRNYRVNYN
SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX
0.860 0.860
Pax8
M09624_2.00
Rattus norvegicus
BCAGBCADSCRKGVM

KBCMYGSHTGVCTGV
Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938
0.860 0.860
PAX8
M11205_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_01
0.860 0.860
PAX8
M11206_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_B
0.860 0.860
PAX8
M05686_2.00
Homo sapiens
NRNBCRNTSAWSCGYGACNN

NNGTCRCGSWTSANYGVNYN
SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX
0.860 0.860
sv
M01302_2.00
Drosophila melanogaster
NNNSCRBRDM

KHYVYGSNNN
PBM
Lambert et al.(2019)
pTH9773
0.820 0.820
sv
M03949_2.00
Drosophila melanogaster
NBCRNYSAWGCGTGACS

SGTCACGCWTSRNYGVN
SELEX
Nitta et al.(2015)
sv_1
0.820 0.820
sv
M06438_2.00
Drosophila melanogaster
RNYSRDSCGTRACNN

NNGTYACGSHYSRNY
B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561
0.820 0.820
egl-38
M02426_2.00
Caenorhabditis elegans
ACCGTGAYCAC

GTGRTCACGGT
PBM
Weirauch et al.(2014)
pTH8981
0.810 0.810
pax-2
M00706_2.00
Caenorhabditis elegans
RMSCRTRACS

SGTYAYGSKY
PBM
Narasimhan et al.(2015)
pTH10794
0.810 0.810
Poxn
M03946_2.00
Drosophila melanogaster
DGCGTGACSGTCACGSY

RSCGTGACSGTCACGCH
SELEX
Nitta et al.(2015)
Poxn_1
0.730 0.730
Poxn
M03947_2.00
Drosophila melanogaster
RSCGKGACSGTTMCGSW

WSCGKAACSGTCMCGSY
SELEX
Nitta et al.(2015)
Poxn_2
0.730 0.730
Poxn
M03948_2.00
Drosophila melanogaster
NCGTTCCGGAACGD

HCGTTCCGGAACGN
SELEX
Nitta et al.(2015)
Poxn_3
0.730 0.730
Poxn
M06437_2.00
Drosophila melanogaster
RSCGTGACG

CGTCACGSY
B1H
Zhu et al.(2011)
Poxn_SOLEXA_5_FBgn0003130
0.730 0.730
PAX1
M03442_2.00
Homo sapiens
DBCANTSAWGCGTGACS

SGTCACGCWTSANTGVH
SELEX
Jolma et al.(2013)
PAX1_1
0.720 0.720
PAX9
M03444_2.00
Homo sapiens
NKCANTSAWGCGTGACS

SGTCACGCWTSANTGMN
SELEX
Jolma et al.(2013)
PAX9_1
0.720 0.720
Poxm
M03944_2.00
Drosophila melanogaster
CAVTCAWGCGTGACR

YGTCACGCWTGABTG
SELEX
Nitta et al.(2015)
Poxm_1
0.720 0.720
Poxm
M03945_2.00
Drosophila melanogaster
NYSAWGCRTRACS

SGTYAYGCWTSRN
SELEX
Nitta et al.(2015)
Poxm_2
0.720 0.720
PAX1
M05687_2.00
Homo sapiens
BCRNTSRWGCGTGACSN

NSGTCACGCWYSANYGV
SELEX
Yin et al.(2017)
PAX1_eDBD_HT-SELEX
0.720 0.720
PAX9
M05689_2.00
Homo sapiens
BHRNYSRDSCGTRACSN

NSGTYACGSHYSRNYDV
SELEX
Yin et al.(2017)
PAX9_eDBD_HT-SELEX
0.720 0.720
Poxm
M06436_2.00
Drosophila melanogaster
NNNNNNMVNHNRNSCRTGA

TCAYGSNYNDNBKNNNNNN
B1H
Zhu et al.(2011)
Poxm_SOLEXA_5_FBgn0003129
0.720 0.720
PAX1
M11207_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX1_B
0.720 0.720
PAX1
M05688_2.00
Homo sapiens
BCRNTSAWGCGTGACSN

NSGTCACGCWTSANYGV
SELEX
Yin et al.(2017)
PAX1_eDBD_Methyl-HT-SELEX
0.720 0.720
PAX9
M05690_2.00
Homo sapiens
BCRNTSAWSCGYGACNN

NNGTCRCGSWTSANYGV
SELEX
Yin et al.(2017)
PAX9_eDBD_Methyl-HT-SELEX
0.720 0.720
PAX7
M00346_2.00
Homo sapiens
NGTYAYGSHN

NDSCRTRACN
PBM
Barrera et al.(2016)
PAX7_REF
0.710 0.710
pax9
M11204_2.00
Danio rerio Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX9_B
0.710 0.710
PAX7
M00345_2.00
Homo sapiens
NSGTCACGSN

NSCGTGACSN
PBM
Barrera et al.(2016)
PAX7_P112L
0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BTMF_0001750801-mRNA-1 Paired box 1 100

Links

Other Paired box family TFs
Other Brugia timori TFs

443 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACLA_037430 Aspergillus clavatus CADACLAG00003256 N 0.000
ACRE_009170 Acremonium chrysogenum ACRE_009170 I 0.000
AFUA_3G09670 Aspergillus fumigatus CADAFUAG00004963 N 0.000
ANIA_03075 Aspergillus nidulans CADANIAG00010003 N 0.000
ARB_01185 Arthroderma benhamiae ARB_01185 N 0.000
ATEG_04481 Aspergillus terreus CADATEAG00009053 N 0.000
BAUCODRAFT_70890 Baudoinia compniacensis BAUCODRAFT_70890 I 0.000
BBA_00740 Beauveria bassiana BBA_00740 I 0.000
Bcin02g05460 Botrytis cinerea Bcin02g05460 I 0.000
BDDG_03436 Blastomyces dermatitidis BDDG_03436 N 0.000
CADAFLAG00001296 Aspergillus flavus CADAFLAG00001296 N 0.000
CADANGAG00012801 Aspergillus niger CADANGAG00012801 N 0.000
CADAORAG00003168 Aspergillus oryzae CADAORAG00003168 N 0.000
CCM_05966 Cordyceps militaris CCM_05966 I 0.000
CFIO01_08325 Colletotrichum fioriniae CFIO01_08325 I 0.000
CGGC5_10678 Colletotrichum gloeosporioides CGGC5_10678 I 0.000
CH063_10224 Colletotrichum higginsianum CH063_10224 I 0.000
CHGG_09596 Chaetomium globosum CHGG_09596 I 0.000
CIMG_01913 Coccidioides immitis CIMG_01913 N 0.000
CMQ_3768 Grosmannia clavigera CMQ_3768 I 0.000
Cob_01903 Colletotrichum orbiculare Cob_01903 I 0.000
CPC735_046040 Coccidioides posadasii CPC735_046040 N 0.000
CSUB01_08919 Colletotrichum sublineola CSUB01_08919 I 0.000
DOTSEDRAFT_54819 Dothistroma septosporum DOTSEDRAFT_54819 I 0.000
estExt_fgenesh1_pg.C_chr_60424 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_60424 I 0.000
estExt_Genewise1Plus.C_13865 Mycosphaerella fijiensis estExt_Genewise1Plus.C_13865 I 0.000
estExt_Genewise1Plus.C_90712 Neurospora discreta estExt_Genewise1Plus.C_90712 I 0.000
e_gw1.8.145.1 Cryphonectria parasitica e_gw1.8.145.1 I 0.000
F503_03706 Ophiostoma piceae uamh F503_03706 I 0.000
FFUJ_08392 Fusarium fujikuroi FFUJ_08392 I 0.000
fgenesh1_pm.00168_#_210 Aspergillus carbonarius fgenesh1_pm.00168_#_210 N 0.000
fgenesh1_pm.sca_12_chr5_2_0000158 Nectria haematococca fgenesh1_pm.sca_12_chr5_2_0000158 I 0.000
FGRRES_17514 Fusarium graminearum FGRRES_17514 I 0.000
FPSE_08858 Fusarium pseudograminearum FPSE_08858 I 0.000
GGTG_02446 Gaeumannomyces graminis GGTG_02446 I 0.000
GLRG_09279 Colletotrichum graminicola GLRG_09279 I 0.000
GMDG_05510 Pseudogymnoascus destructans GMDG_05510 I 0.000
GMDG_06850 Pseudogymnoascus destructans GMDG_06850 I 0.000
GSTUM_00003233001 Tuber melanosporum GSTUM_00003233001 N 0.000
GSTUM_00008124001 Tuber melanosporum GSTUM_00008124001 N 0.000
H101_05235 Trichophyton interdigitale H101_05235 N 0.000
H102_08372 Trichophyton rubrum H102_08372 N 0.000
H105_08399 Trichophyton soudanense H105_08399 N 0.000
HCBG_02521 Histoplasma capsulatum HCBG_02521 N 0.000
HMPREF1624_04642 Sporothrix schenckii HMPREF1624_04642 I 0.000
M7I_1858 Glarea lozoyensis M7I_1858 I 0.000
MANI_011716 Metarhizium anisopliae MANI_011716 I 0.000
MAPG_09501 Magnaporthe poae MAPG_09501 I 0.000
MBM_07119 Marssonina brunnea MBM_07119 N 0.000
MBR_04909 Metarhizium brunneum MBR_04909 I 0.000
MCYG_03418 Microsporum canis MCYG_03418 N 0.000
MCYG_03418 Arthroderma otae MCYG_03418 N 0.000
MGU_01761 Metarhizium guizhouense MGU_01761 I 0.000
MGYG_00581 Microsporum gypseum MGYG_00581 N 0.000
MPH_00135 Macrophomina phaseolina MPH_00135 N 0.000
MYCFIDRAFT_204155 Pseudocercospora fijiensis MYCFIDRAFT_204155 I 0.000
Mycgr3G109947 Zymoseptoria tritici Mycgr3G109947 I 0.000
MYCTH_2308823 Myceliophthora thermophila MYCTH_2308823 I 0.000
NCU02307 Neurospora crassa NCU02307 D 0.000
NechaG93341 Fusarium solani NechaG93341 I 0.000
NEUTE1DRAFT_124026 Neurospora tetrasperma NEUTE1DRAFT_124026 I 0.000
NFIA_067630 Neosartorya fischeri CADNFIAG00006385 N 0.000
OCS_02179 Ophiocordyceps sinensis OCS_02179 I 0.000
Pc12g15860 Penicillium chrysogenum Pc12g15860 N 0.000
PCH_Pc12g15860 Penicillium rubens PCH_Pc12g15860 N 0.000
PDE_04982 Penicillium oxalicum PDE_04982 N 0.000
PDIP_76170 Penicillium digitatum PDIP_76170 N 0.000
PEX1_096620 Penicillium expansum PEX1_096620 N 0.000
PFICI_14476 Pestalotiopsis fici PFICI_14476 I 0.000
PITC_015280 Penicillium italicum PITC_015280 N 0.000
PMAA_045840 Penicillium marneffei PMAA_045840 N 0.000
PMAA_045840 Talaromyces marneffei PMAA_045840 N 0.000
PODANS_5_9700 Podospora anserina PODANS_5_9700 I 0.000
PV04_04067 Capronia semiimmersa PV04_04067 N 0.000
PVAR5_5474 Byssochlamys spectabilis PVAR5_5474 N 0.000
S40285_04496 Stachybotrys chlorohalonata S40285_04496 I 0.000
S40288_04125 Stachybotrys chartarum S40288_04125 I 0.000
SAPIO_CDS3835 Scedosporium apiospermum SAPIO_CDS3835 I 0.000
SBOR_8128 Sclerotinia borealis SBOR_8128 I 0.000
SMAC_09353 Sordaria macrospora SMAC_09353 I 0.000
TEQG_00925 Trichophyton equinum TEQG_00925 N 0.000
TESG_06256 Trichophyton tonsurans TESG_06256 N 0.000
THITE_2050890 Thielavia terrestris THITE_2050890 I 0.000
TRIATDRAFT_37495 Trichoderma atroviride TRIATDRAFT_37495 I 0.000
TRIREDRAFT_51907 Trichoderma reesei TRIREDRAFT_51907 I 0.000
TRIVIDRAFT_114564 Trichoderma virens TRIVIDRAFT_114564 I 0.000
TRV_03240 Trichophyton verrucosum TRV_03240 N 0.000
TSTA_035080 Talaromyces stipitatus TSTA_035080 N 0.000
U727_00431251121 Penicillium solitum U727_00431251121 N 0.000
UCRNP2_2614 Neofusicoccum parvum UCRNP2_2614 N 0.000
UREG_06856 Uncinocarpus reesii UREG_06856 N 0.000
UV8b_6210 Ustilaginoidea virens UV8b_6210 I 0.000
VDAG_09925 Verticillium dahliae VDAG_09925 I 0.000
VHEMI08584 Torrubiella hemipterigena VHEMI08584 I 0.000
W97_03128 Coniosporium apollinis W97_03128 N 0.000
X797_001395 Metarhizium robertsii X797_001395 I 0.000