D915_05709 (Fasciola hepatica)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 D915_05709 T312577_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR

YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.730 0.730
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN

NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.730 0.730
Pax5B
M01301_2.00
Gallus gallus
NSNDTNNNN

NNNNAHNSN
PBM
Lambert et al.(2019)
pTH9781
0.713 0.713
sv
M01302_2.00
Drosophila melanogaster
NNNSCRBRDM

KHYVYGSNNN
PBM
Lambert et al.(2019)
pTH9773
0.713 0.713
PAX5
M03443_2.00
Homo sapiens
RNBYANYSAWSCGTRACN

NGTYACGSWTSRNTRVNY
SELEX
Jolma et al.(2013)
PAX5_1
0.713 0.713
sv
M03949_2.00
Drosophila melanogaster
NBCRNYSAWGCGTGACS

SGTCACGCWTSRNYGVN
SELEX
Nitta et al.(2015)
sv_1
0.713 0.713
sv
M06438_2.00
Drosophila melanogaster
RNYSRDSCGTRACNN

NNGTYACGSHYSRNY
B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561
0.713 0.713
PAX5
M08160_2.00
Homo sapiens
RDGCGTGACCNN

NNGGTCACGCHY
ChIP-seq
Mathelier et al.(2014)
MA0014.3
0.713 0.713
PAX5
M07995_2.00
Homo sapiens
BCAVYSRDSCRKRRC

GYYMYGSHYSRBTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha
0.713 0.713
PAX5
M07996_2.00
Homo sapiens
BCASYSRDSCRTRAC

GTYAYGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha
0.713 0.713
PAX5
M07997_2.00
Homo sapiens
CASYSRDSCRKRACN

NGTYMYGSHYSRSTG
ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha
0.713 0.713
PAX5
M07998_2.00
Homo sapiens
BCASYSRDSCGKRRC

GYYMCGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha
0.713 0.713
PAX5
M08227_2.00
Homo sapiens
BCANYSRDGCGTRAM

KTYACGCHYSRNTGV
ChIP-seq
Contrino et al.(2012)
Mv108
0.713 0.713
PAX5
M08228_2.00
Homo sapiens
AGCGTGRCYG

CRGYCACGCT
ChIP-seq
Contrino et al.(2012)
Mv109
0.713 0.713
PAX5
M09341_2.00
Homo sapiens
SNVDGNKCARCVRAGCRDGAC

GTCHYGCTYBGYTGMNCHBNS
Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A
0.713 0.713
Pax5
M09342_2.00
Mus musculus
VDRNBCAVYVRDSCRKRRM

KYYMYGSHYBRBTGVNYHB
Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A
0.713 0.713
PAX5
M09622_2.00
Homo sapiens
BCASYSRDSCRTGRMN

NKYCAYGSHYSRSTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1
0.713 0.713
PAX5
M09623_2.00
Homo sapiens
BCABNVRSCGTGAC

GTCACGSYBNVTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2
0.713 0.713
PAX5
M11208_2.00
Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB

VNDSYSKCYMYNCWNCVNTGMNYNNNGV
Transfac
Matys et al.(2006)
V$PAX5_01
0.713 0.713
PAX5
M11209_2.00
Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH

DBNRYBGTYMCGCTYNAVVHNHCHBDYB
Transfac
Matys et al.(2006)
V$PAX5_02
0.713 0.713
PAX5
M11210_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_06
0.713 0.713
PAX5
M11211_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_07
0.713 0.713
PAX5
M11212_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_Q6
0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
D915_05709 Paired box 23 144

Links

Other Paired box family TFs
Other Fasciola hepatica TFs

158 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
pax2b Danio rerio ENSDARG00000032578 D 0.730
PAX6 Homo sapiens ENSG00000007372 D 0.886
PAX2 Homo sapiens ENSG00000075891 D 0.712
Pax6 Mus musculus ENSMUSG00000027168 D 0.852
pax2 Xenopus tropicalis XB-GENE-486801 D 0.712
MCINX012239 Melitaea cinxia MCINX012239 I 0.744
LCUP013028 Lucilia cuprina LCUP013028 I 0.891
LCUP011945 Lucilia cuprina LCUP011945 I 0.721
CLEC008846 Cimex lectularius CLEC008846 I 0.836
CLEC008733 Cimex lectularius CLEC008733 I 0.821
AAC60302 Xenopus laevis AAC60302 I 0.901
LCUP015670 Lucilia cuprina LCUP015670 I 0.875
LDEC008984 Leptinotarsa decemlineata LDEC008984 I 0.833
LDEC012767 Leptinotarsa decemlineata LDEC012767 I 0.713
Sjc_0004220 Schistosoma japonicum Sjc_0004220 I 0.912
pax5.L Xenopus laevis XB-GENE-865318 I 0.705
AATE019182 Anopheles atroparvus AATE019182 I 0.820
ACOM023323 Anopheles coluzzii ACOM023323 I 0.798
ADIR011362 Anopheles dirus ADIR011362 I 0.705
Sakowv30025789m.g Saccoglossus kowalevskii Sakowv30025789m.g I 0.704
Ocbimv22011111m.g Octopus bimaculoides Ocbimv22011111m.g I 0.840
Ocbimv22007526m.g Octopus bimaculoides Ocbimv22007526m.g I 0.713
MESCA003563 Megaselia scalaris MESCA003563 I 0.721
PHUM217120 Pediculus humanus PHUM217120 I 0.832
Ppa-vab-3 Pristionchus pacificus PPA03442 I 0.736
RPRC001429 Rhodnius prolixus RPRC001429 I 0.846
RPRC003362 Rhodnius prolixus RPRC003362 I 0.843
SINV11533 Solenopsis invicta SINV11533 I 0.713
SINV17241 Solenopsis invicta SINV17241 I 0.835
SPU_006786 Strongylocentrotus purpuratus SPU_006786 I 0.844
SPU_014539 Strongylocentrotus purpuratus SPU_014539 I 0.712
tetur29g01000 Tetranychus urticae tetur29g01000 I 0.721
WBGene00241130 Onchocerca volvulus WBGene00241130 I 0.779
YQE_05107 Dendroctonus ponderosae YQE_05107 I 0.821
YQE_12361 Dendroctonus ponderosae YQE_12361 I 0.721
Cflo_05394--XP_001120031.1_APIME Camponotus floridanus Cflo_05394--XP_001120031.1_APIME I 0.836
Ogr18043 Ophisaurus gracilis Ogr18043 I 0.718
AEPI004837 Anopheles epiroticus AEPI004837 I 0.705
AMAM010937 Anopheles maculatus AMAM010937 I 0.820
L893_g1041 Steinernema glaseri L893_g1041 I 0.744
nAv.1.0.1.g05236 Acanthocheilonema viteae nAv.1.0.1.g05236 I 0.779
nDi.2.2.2.g03678 Dirofilaria immitis nDi.2.2.2.g03678 I 0.779
NECAME_04524 Necator americanus NECAME_04524 I 0.768
nOo.2.0.1.g04580 Onchocerca ochengi nOo.2.0.1.g04580 I 0.779
nRc.2.0.1.g00894 Romanomermis culicivorax nRc.2.0.1.g00894 I 0.816
nRc.2.0.1.g30341 Romanomermis culicivorax nRc.2.0.1.g30341 I 0.768
OESDEN_18680 Oesophagostomum dentatum OESDEN_18680 I 0.750
OFLC_0001383501 Onchocerca flexuosa OFLC_0001383501 I 0.777
scaffold478-EXSNAP2012.12 Pristionchus exspectatus scaffold478-EXSNAP2012.12 I 0.736
SCUD_0000535601 Schistosoma curassoni SCUD_0000535601 I 0.943
SSLN_0001115101 Schistocephalus solidus SSLN_0001115101 I 0.885
TASK_0000210301 Taenia asiatica TASK_0000210301 I 0.792
TELCIR_00311 Teladorsagia circumcincta TELCIR_00311 I 0.768
TRE_0000921601 Trichobilharzia regenti TRE_0000921601 I 0.888
L892_g26455 Steinernema scapterisci L892_g26455 I 0.705
L889_g29910 Steinernema feltiae L889_g29910 I 0.768
AQUA004184 Anopheles quadriannulatus AQUA004184 I 0.701
BGLB007764 Biomphalaria glabrata BGLB007764 I 0.869
LLOJ002076 Lutzomyia longipalpis LLOJ002076 I 0.713
A_03128 Schistosoma haematobium A_03128 I 0.943
ACAC_0001290301 Angiostrongylus cantonensis ACAC_0001290301 I 0.835
ACOC_0000178201 Angiostrongylus costaricensis ACOC_0000178201 I 0.835
ANCCEY_08417 Ancylostoma ceylanicum ANCCEY_08417 I 0.796
TTAC_0000709401 Hydatigera taeniaeformis TTAC_0000709401 I 0.800
DILT_0000442801 Diphyllobothrium latum DILT_0000442801 I 0.864
ECANG7_07793 Echinococcus canadensis ECANG7_07793 I 0.803
ECPE_0000273501 Echinostoma caproni ECPE_0000273501 I 0.918
ECPE_0001376401 Echinostoma caproni ECPE_0001376401 I 0.944
EmuJ_000389800 Echinococcus multilocularis EmuJ_000389800 I 0.784
EVEC_0000795701 Enterobius vermicularis EVEC_0000795701 I 0.774
HPBE_0000479901 Heligmosomoides bakeri HPBE_0000479901 I 0.710
TsM_000804100 Taenia solium TsM_000804100 I 0.792
ENSCSAVG00000007987 Ciona savignyi ENSCSAVG00000007987 I 0.789
CGI_10024166 Crassostrea gigas CGI_10024166 I 0.712
DAPPUDRAFT_122807 Daphnia pulex DAPPUDRAFT_122807 I 0.806
DAPPUDRAFT_311028 Daphnia pulex DAPPUDRAFT_311028 I 0.730
DAPPUDRAFT_38922 Daphnia pulex DAPPUDRAFT_38922 I 0.907
ENSACAG00000011033 Anolis carolinensis ENSACAG00000011033 I 0.730
PAX5 Anolis carolinensis ENSACAG00000011646 I 0.705
ENSAMXG00000005158 Astyanax mexicanus ENSAMXG00000005158 I 0.720
pax2a Danio rerio ENSDARG00000028148 I 0.721
pax5 Danio rerio ENSDARG00000037383 I 0.704
Pax5 Dipodomys ordii ENSDORG00000015818 I 0.713
pax2a Gasterosteus aculeatus ENSGACG00000008391 I 0.704
Pax-2 Gallus gallus ENSGALG00000005689 I 0.712
ENSGMOG00000000463 Gadus morhua ENSGMOG00000000463 I 0.721
ENSGMOG00000012561 Gadus morhua ENSGMOG00000012561 I 0.704
ENSLACG00000013159 Latimeria chalumnae ENSLACG00000013159 I 0.713
CBG04481 Caenorhabditis briggsae CBG04481 I 0.754
CapteG119889 Capitella teleta CapteG119889 I 0.702
Bm14693 Brugia malayi Bm14693 I 0.779
pax6b Danio rerio ENSDARG00000045936 I 0.922
pax6a Danio rerio ENSDARG00000103379 I 0.929
pax6b Gasterosteus aculeatus ENSGACG00000016030 I 0.848
PAX2 Loxodonta africana ENSLAFG00000002388 I 0.718
ENSLOCG00000012825 Lepisosteus oculatus ENSLOCG00000012825 I 0.705
Pax2 Rattus norvegicus ENSRNOG00000014253 I 0.718
pax2.L Xenopus laevis XB-GENE-486805 I 0.730
L596_g12356 Steinernema carpocapsae L596_g12356 I 0.770
WUBG_13045 Wuchereria bancrofti WUBG_13045 I 0.779
ACEP12359 Atta cephalotes ACEP12359 I 0.713
ACEP24464 Atta cephalotes ACEP24464 I 0.836
ACYPI000633 Acyrthosiphon pisum ACYPI000633 I 0.704
BGIBMGA009432 Bombyx mori BGIBMGA009432 I 0.784
BGIBMGA009545 Bombyx mori BGIBMGA009545 I 0.794
BGIBMGA013358 Bombyx mori BGIBMGA013358 I 0.718
ENSLOCG00000005490 Lepisosteus oculatus ENSLOCG00000005490 I 0.704
ENSTNIG00000013141 Tetraodon nigroviridis ENSTNIG00000013141 I 0.737
pax2a Takifugu rubripes ENSTRUG00000008891 I 0.704
pax2b Takifugu rubripes ENSTRUG00000011987 I 0.705
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.800
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.800
PAX8 Vicugna pacos ENSVPAG00000003973 I 0.741
ENSXMAG00000012680 Xiphophorus maculatus ENSXMAG00000012680 I 0.704
GF20618 Drosophila ananassae FBgn0097624 I 0.721
GI14046 Drosophila mojavensis FBgn0136800 I 0.721
GL18401 Drosophila persimilis FBgn0156002 I 0.721
GM13025 Drosophila sechellia FBgn0167956 I 0.705
GJ13730 Drosophila virilis FBgn0200951 I 0.721
HelroG124549 Helobdella robusta HelroG124549 I 0.705
GK13586 Drosophila willistoni FBgn0215594 I 0.721
spa-sv Drosophila pseudoobscura FBgn0249275 I 0.721
HMEL009702 Heliconius melpomene HMEL009702 I 0.843
KGM_02181 Danaus plexippus KGM_02181 I 0.858
KGM_12316 Danaus plexippus KGM_12316 I 0.730
pax5 Takifugu rubripes ENSTRUG00000003227 I 0.704
GH23966 Drosophila grimshawi FBgn0131423 I 0.721
ENSPFOG00000013202 Poecilia formosa ENSPFOG00000013202 I 0.704
ENSPFOG00000011719 Poecilia formosa ENSPFOG00000011719 I 0.704
ENSPFOG00000003702 Poecilia formosa ENSPFOG00000003702 I 0.730
pax2b Oryzias latipes ENSORLG00000009321 I 0.704
Pax5 Rattus norvegicus ENSRNOG00000024729 I 0.713
ENSONIG00000018496 Oreochromis niloticus ENSONIG00000018496 I 0.704
ENSONIG00000016065 Oreochromis niloticus ENSONIG00000016065 I 0.730
ENSMEUG00000011758 Macropus eugenii ENSMEUG00000011758 I 0.768
pax5 Tetraodon nigroviridis ENSTNIG00000005085 I 0.713
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.800
TCLT_0000192601 Thelazia callipaeda TCLT_0000192601 N 0.787
PXEA_0001769401 Protopolystoma xenopodis PXEA_0001769401 N 0.900
SNAPOd2T00015306001 Oikopleura dioica SNAPOd2T00015306001 N 0.743
SMTD_0001015101 Schistosoma mattheei SMTD_0001015101 N 0.811
SPER_0000208501 Spirometra erinaceieuropaei SPER_0000208501 N 0.860
PEQ_0001140301 Parascaris equorum PEQ_0001140301 N 0.736
EEL_0000889701 Elaeophora elaphi EEL_0000889701 N 0.750
LDEC006108 Leptinotarsa decemlineata LDEC006108 N 0.730
HDID_0000853801 Hymenolepis diminuta HDID_0000853801 N 0.795
HmN_000735200 Hymenolepis microstoma HmN_000735200 N 0.776
DME_0000186001 Dracunculus medinensis DME_0000186001 N 0.769
DILT_0000606101 Diphyllobothrium latum DILT_0000606101 N 0.852
BTMF_0000869901 Brugia timori BTMF_0000869901 N 0.744
ENSPFOG00000023634 Poecilia formosa ENSPFOG00000023634 N 0.703
ANCDUO_03668 Ancylostoma duodenale ANCDUO_03668 N 0.737
LOAG_04187 Loa loa LOAG_04187 N 0.756
nLs.2.1.2.g01338 Litomosoides sigmodontis nLs.2.1.2.g01338 N 0.744
ACEP20912 Atta cephalotes ACEP20912 N 0.800
LCUP015671 Lucilia cuprina LCUP015671 N 0.712
ALUE_0000749601 Ascaris lumbricoides ALUE_0000749601 N 0.744
ASU_08112 Ascaris suum ASU_08112 N 0.750