CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nRc.2.0.1.g09163
(
Romanomermis culicivorax
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
nRc.2.0.1.g09163
T312849_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t09163-RA
Paired box
35
159
RQAGVNQLGGVFVNGRPLPLFIRCKIVEMARLGIRPCDISRQLLISHGCVSKILSRFNETGSISPGALDGNKKRIIPHLVSRIILQWKHEKPDVTVKEIRDYLLYYRIYVESNVPAGSSIEKILE
Links
Other
Paired box
family TFs
Other
Romanomermis culicivorax
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OESDEN_18680
Oesophagostomum dentatum
OESDEN_18680
I
0.750
AQUA004184
Anopheles quadriannulatus
AQUA004184
I
0.727
PAX5
Tursiops truncatus
ENSTTRG00000006049
I
0.727
PAX5
Tupaia belangeri
ENSTBEG00000007983
I
0.727
ENSTSYG00000008085
Tarsius syrichta
ENSTSYG00000008085
I
0.727
HPBE_0000479901
Heligmosomoides bakeri
HPBE_0000479901
I
0.725
LCUP013028
Lucilia cuprina
LCUP013028
I
0.709
DAPPUDRAFT_38922
Daphnia pulex
DAPPUDRAFT_38922
I
0.704