RSKR_0001164600 (Rhabditophanes kr3021)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 RSKR_0001164600 T312898_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Poxm
M03944_2.00
Drosophila melanogaster
CAVTCAWGCGTGACR

YGTCACGCWTGABTG
SELEX
Nitta et al.(2015)
Poxm_1
0.704 0.704
Poxm
M03945_2.00
Drosophila melanogaster
NYSAWGCRTRACS

SGTYAYGCWTSRN
SELEX
Nitta et al.(2015)
Poxm_2
0.704 0.704
Poxm
M06436_2.00
Drosophila melanogaster
NNNNNNMVNHNRNSCRTGA

TCAYGSNYNDNBKNNNNNN
B1H
Zhu et al.(2011)
Poxm_SOLEXA_5_FBgn0003129
0.704 0.704
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0001164600.1 Paired box 42 166

Links

Other Paired box family TFs
Other Rhabditophanes kr3021 TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Poxm Drosophila melanogaster FBgn0003129 D 0.704
CBN07010 Caenorhabditis brenneri CBN07010 I 0.704
PHUM515110 Pediculus humanus PHUM515110 I 0.704
LCUP007799 Lucilia cuprina LCUP007799 I 0.704
ACAC_0001249001 Angiostrongylus cantonensis ACAC_0001249001 I 0.712
ACOC_0000962101 Angiostrongylus costaricensis ACOC_0000962101 I 0.704
EVEC_0000163101 Enterobius vermicularis EVEC_0000163101 I 0.712
PTRK_0000192900 Parastrongyloides trichosuri PTRK_0000192900 I 0.721
SMUV_0000337801 Syphacia muris SMUV_0000337801 I 0.720
SPAL_0000396700 Strongyloides papillosus SPAL_0000396700 I 0.744
SSTP_0000083300 Strongyloides stercoralis SSTP_0000083300 I 0.744
GE24855 Drosophila yakuba FBgn0241954 I 0.704
GK14101 Drosophila willistoni FBgn0216107 I 0.704
GJ22751 Drosophila virilis FBgn0209855 I 0.704
CBN25998 Caenorhabditis brenneri CBN25998 I 0.704
DAPPUDRAFT_307722 Daphnia pulex DAPPUDRAFT_307722 I 0.704
GA21910 Drosophila pseudoobscura FBgn0081895 I 0.704
GF16668 Drosophila ananassae FBgn0093689 I 0.704
GG17455 Drosophila erecta FBgn0109681 I 0.704
GH17421 Drosophila grimshawi FBgn0124891 I 0.704
GI22750 Drosophila mojavensis FBgn0145477 I 0.704
GL24118 Drosophila persimilis FBgn0161708 I 0.704
GM26349 Drosophila sechellia FBgn0181202 I 0.704
SVE_0281100 Strongyloides venezuelensis SVE_0281100 I 0.736