CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F443_17620
(
Phytophthora parasitica
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05225 (HTH_psq)
IPR007889
F443_17620
T313651_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETI36179
Pipsqueak
38
76
WAQAVHAVVERRLSMRQASQTFGLQQVALQRLVRQHTLQ
ETI36179
Pipsqueak
389
428
EAAMEDVAIHGMSLRNAAKAHGVHFAALHRRLKKRQQHKL
Links
Other
Pipsqueak
family TFs
Other
Phytophthora parasitica
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phyra84978
Phytophthora ramorum
Phyra84978
N
0.910
fgenesh_scip_prom.28083.7007
Phytophthora lateralis
fgenesh_scip_prom.28083.7007
N
0.897
Phyra84977
Phytophthora ramorum
Phyra84977
N
0.897
Phyra74785
Phytophthora ramorum
Phyra74785
N
0.897
Phyra74784
Phytophthora ramorum
Phyra74784
N
0.897
Physo129336
Phytophthora sojae
Physo129336
N
0.885
PITG_12296
Phytophthora infestans
PITG_12296
N
0.846