Bra034379 (Brassica rapa)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04640 (PLATZ) IPR006734 Bra034379 T315284_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra034379.1-P PLATZ 60 141

Links

Other PLATZ family TFs
Other Brassica rapa TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo4g164920 Brassica oleracea Bo4g164920 N 0.951
Bostr.27991s0138 Boechera stricta Bostr.27991s0138 N 0.938
Carubv10024278m.g Capsella rubella Carubv10024278m.g N 0.926
AT2G27930 Arabidopsis thaliana AT2G27930 N 0.926
Cagra.15046s0001 Capsella grandiflora Cagra.15046s0001 N 0.926
Bra011992 Brassica rapa Bra011992 N 0.914
Thhalv10017279m.g Eutrema salsugineum Thhalv10017279m.g N 0.914
Bo4g073120 Brassica oleracea Bo4g073120 N 0.889
Cla001071 Citrullus lanatus Cla001071 N 0.811
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N 0.806
PK29286.1 Cannabis sativa PK29286.1 N 0.806
mgf023930m Mimulus guttatus mgf023930m N 0.806
Cucsa.200310 Cucumis sativus Cucsa.200310 N 0.797
evm.TU.supercontig_5.128 Carica papaya evm.TU.supercontig_5.128 N 0.792
Aquca_009_01064 Aquilegia coerulea Aquca_009_01064 N 0.792
PGSC0003DMG400008598 Solanum tuberosum PGSC0003DMG400008598 N 0.792
Solyc10g085800.1 Solanum lycopersicum Solyc10g085800.1 N 0.781
gene00954-v1.0-hybrid Fragaria vesca gene00954-v1.0-hybrid N 0.781
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N 0.778
Ca_19047 Cicer arietinum Ca_19047 N 0.778
GLYMA19G37220 Glycine max GLYMA19G37220 N 0.778
GLYMA10G07240 Glycine max GLYMA10G07240 N 0.778
POPTR_0009s00830 Populus trichocarpa POPTR_0009s00830 N 0.770
orange1.1g028583m.g Citrus sinensis orange1.1g028583m.g N 0.770
cassava28497.m1 Manihot esculenta cassava28497.m1 N 0.770
GLYMA03G34530 Glycine max GLYMA03G34530 N 0.764
GLYMA13G21140 Glycine max GLYMA13G21140 N 0.764
MTR_7g102790 Medicago truncatula MTR_7g102790 N 0.764
Cucsa.378840 Cucumis sativus Cucsa.378840 N 0.764
SapurV1A.0288s0160 Salix purpurea SapurV1A.0288s0160 N 0.760
TCM_041560 Theobroma cacao TCM_041560 N 0.760
evm.TU.supercontig_30.61 Carica papaya evm.TU.supercontig_30.61 N 0.757
POPTR_0001s21990 Populus trichocarpa POPTR_0001s21990 N 0.757
POPTR_0016s10920 Populus trichocarpa POPTR_0016s10920 N 0.750
Ca_00735 Cicer arietinum Ca_00735 N 0.750
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N 0.750
Eucgr.A01594 Eucalyptus grandis Eucgr.A01594 N 0.750
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N 0.750
Lus10035554.g Linum usitatissimum Lus10035554.g N 0.750
Lus10027735.g Linum usitatissimum Lus10027735.g N 0.750
29589.m001281 Ricinus communis 29589.m001281 N 0.747
SapurV1A.0360s0060 Salix purpurea SapurV1A.0360s0060 N 0.743
Eucgr.B03915 Eucalyptus grandis Eucgr.B03915 N 0.741
Gorai.001G117900 Gossypium raimondii Gorai.001G117900 N 0.741
chr3.CM0396.500.nd Lotus japonicus chr3.CM0396.500.nd N 0.740
30054.m000824 Ricinus communis 30054.m000824 N 0.736
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N 0.736
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N 0.736
fgenesh1_pg.scaffold_102000043 Physcomitrella patens fgenesh1_pg.scaffold_102000043 N 0.736
Lus10004577.g Linum usitatissimum Lus10004577.g N 0.736
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N 0.736
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N 0.736
MTR_1g062160 Medicago truncatula MTR_1g062160 N 0.736
mgf013167m Mimulus guttatus mgf013167m N 0.733
mgf006916m Mimulus guttatus mgf006916m N 0.733
GRMZM2G408887 Zea mays GRMZM2G408887 N 0.733
VIT_08s0007g04560 Vitis vinifera VIT_08s0007g04560 N 0.728
Gorai.006G217100 Gossypium raimondii Gorai.006G217100 N 0.722
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N 0.722
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N 0.722
GLYMA01G02180 Glycine max GLYMA01G02180 N 0.722
BGIOSGA005806 Oryza indica BGIOSGA005806 N 0.722
Lus10040082.g Linum usitatissimum Lus10040082.g N 0.722
Lus10030968.g Linum usitatissimum Lus10030968.g N 0.722
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N 0.722
GLYMA09G33770 Glycine max GLYMA09G33770 N 0.722
GRMZM2G091044 Zea mays GRMZM2G091044 N 0.722
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N 0.722
Cucsa.313040 Cucumis sativus Cucsa.313040 N 0.722
OPUNC02G26310 Oryza punctata OPUNC02G26310 N 0.722
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N 0.722
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N 0.722
OS02G0692700 Oryza sativa OS02G0692700 N 0.722
ONIVA02G31400 Oryza nivara ONIVA02G31400 N 0.722
OLONG_023395 Oryza longistaminata OLONG_023395 N 0.722
LPERR02G23300 Leersia perrieri LPERR02G23300 N 0.722
OB02G35810 Oryza brachyantha OB02G35810 N 0.722
OBART02G28660 Oryza barthii OBART02G28660 N 0.722
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N 0.722
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N 0.722
Sb04g031230 Sorghum bicolor Sb04g031230 N 0.722
Cla016461 Citrullus lanatus Cla016461 N 0.722
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N 0.722
e_gw1.1.253.1 Physcomitrella patens e_gw1.1.253.1 N 0.722
Ca_11505 Cicer arietinum Ca_11505 N 0.722
GSMUA_AchrUn_randomG07560_001 Musa acuminata GSMUA_AchrUn_randomG07560_001 N 0.716
GRMZM2G171934 Zea mays GRMZM2G171934 N 0.709
Sb07g024020 Sorghum bicolor Sb07g024020 N 0.709
GSMUA_Achr11G17810_001 Musa acuminata GSMUA_Achr11G17810_001 N 0.708
MTR_8g066820 Medicago truncatula MTR_8g066820 N 0.708
MTR_5g030130 Medicago truncatula MTR_5g030130 N 0.708
GRMZM2G086403 Zea mays GRMZM2G086403 N 0.708
GSMUA_Achr4G19110_001 Musa acuminata GSMUA_Achr4G19110_001 N 0.708
Gorai.008G226100 Gossypium raimondii Gorai.008G226100 N 0.708
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N 0.708
GLYMA08G36641 Glycine max GLYMA08G36641 N 0.708
Gorai.003G183000 Gossypium raimondii Gorai.003G183000 N 0.708
GSMUA_Achr5G13970_001 Musa acuminata GSMUA_Achr5G13970_001 N 0.708
Lus10000482.g Linum usitatissimum Lus10000482.g N 0.708
PRUPE_ppa011458mg Prunus persica PRUPE_ppa011458mg N 0.704
TCM_022356 Theobroma cacao TCM_022356 N 0.704
Pm001175 Prunus mume Pm001175 N 0.704
Ciclev10030107m.g Citrus clementina Ciclev10030107m.g N 0.704
Pm012470 Prunus mume Pm012470 N 0.704
Gorai.009G411100 Gossypium raimondii Gorai.009G411100 N 0.704