Pavir.Ab00578 (Panicum virgatum)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Pavir.Ab00578 T316134_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ab00578.1.p PLATZ 7 78

Links

Other PLATZ family TFs
Other Panicum virgatum TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_02274 Aegilops tauschii F775_02274 N 0.875
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N 0.778
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N 0.792
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.819
Aquca_030_00325 Aquilegia coerulea Aquca_030_00325 N 0.722
Aquca_013_00703 Aquilegia coerulea Aquca_013_00703 N 0.722
Aquca_016_00081 Aquilegia coerulea Aquca_016_00081 N 0.750
fgenesh2_kg.3__2996__AT2G12646.1 Arabidopsis lyrata fgenesh2_kg.3__2996__AT2G12646.1 N 0.750
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N 0.847
scaffold_303520.1 Arabidopsis lyrata scaffold_303520.1 N 0.750
AT2G12646 Arabidopsis thaliana AT2G12646 N 0.750
AT1G31040 Arabidopsis thaliana AT1G31040 N 0.847
Bostr.22685s0001 Boechera stricta Bostr.22685s0001 N 0.750
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N 0.847
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.931
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.917
BRADI3G06190 Brachypodium distachyon BRADI3G06190 N 0.792
Bo9g022400 Brassica oleracea Bo9g022400 N 0.736
Bo3g087070 Brassica oleracea Bo3g087070 N 0.750
Bo2g121040 Brassica oleracea Bo2g121040 N 0.833
Bo7g041160 Brassica oleracea Bo7g041160 N 0.847
Bra038403 Brassica rapa Bra038403 N 0.833
Bra037203 Brassica rapa Bra037203 N 0.736
Bra014899 Brassica rapa Bra014899 N 0.847
Bra013149 Brassica rapa Bra013149 N 0.750
PK04104.1 Cannabis sativa PK04104.1 N 0.819
Cagra.1508s0089 Capsella grandiflora Cagra.1508s0089 N 0.847
Cagra.2506s0001 Capsella grandiflora Cagra.2506s0001 N 0.750
Carubv10011663m.g Capsella rubella Carubv10011663m.g N 0.847
Carubv10015124m.g Capsella rubella Carubv10015124m.g N 0.750
evm.TU.supercontig_46.74 Carica papaya evm.TU.supercontig_46.74 N 0.764
evm.TU.supercontig_30.133 Carica papaya evm.TU.supercontig_30.133 N 0.778
evm.TU.supercontig_29.132 Carica papaya evm.TU.supercontig_29.132 N 0.736
Ca_06740 Cicer arietinum Ca_06740 N 0.778
Cla006768 Citrullus lanatus Cla006768 N 0.708
Cla010042 Citrullus lanatus Cla010042 N 0.875
Cla019628 Citrullus lanatus Cla019628 N 0.757
Ciclev10016385m.g Citrus clementina Ciclev10016385m.g N 0.819
Ciclev10010747m.g Citrus clementina Ciclev10010747m.g N 0.722
orange1.1g048158m.g Citrus sinensis orange1.1g048158m.g N 0.819
orange1.1g042361m.g Citrus sinensis orange1.1g042361m.g N 0.722
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.764
Cucsa.120560 Cucumis sativus Cucsa.120560 N 0.708
Cucsa.134530 Cucumis sativus Cucsa.134530 N 0.778
Cucsa.048750 Cucumis sativus Cucsa.048750 N 0.875
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N 0.764
Eucgr.E04309 Eucalyptus grandis Eucgr.E04309 N 0.819
Eucgr.D00032 Eucalyptus grandis Eucgr.D00032 N 0.764
Eucgr.C00450 Eucalyptus grandis Eucgr.C00450 N 0.764
Thhalv10009789m.g Eutrema salsugineum Thhalv10009789m.g N 0.833
Thhalv10022828m.g Eutrema salsugineum Thhalv10022828m.g N 0.764
gene19989-v1.0-hybrid Fragaria vesca gene19989-v1.0-hybrid N 0.744
gene30812-v1.0-hybrid Fragaria vesca gene30812-v1.0-hybrid N 0.736
GLYMA09G12330 Glycine max GLYMA09G12330 N 0.750
GLYMA09G05781 Glycine max GLYMA09G05781 N 0.806
GLYMA08G09191 Glycine max GLYMA08G09191 N 0.792
GLYMA13G23360 Glycine max GLYMA13G23360 N 0.778
GLYMA05G26271 Glycine max GLYMA05G26271 N 0.778
GLYMA01G17580 Glycine max GLYMA01G17580 N 0.750
GLYMA11G17770 Glycine max GLYMA11G17770 N 0.736
GLYMA17G11470 Glycine max GLYMA17G11470 N 0.778
GLYMA15G17040 Glycine max GLYMA15G17040 N 0.819
GLYMA15G23920 Glycine max GLYMA15G23920 N 0.750
Gorai.009G013500 Gossypium raimondii Gorai.009G013500 N 0.764
Gorai.001G174900 Gossypium raimondii Gorai.001G174900 N 0.708
Gorai.010G057300 Gossypium raimondii Gorai.010G057300 N 0.750
Gorai.008G237000 Gossypium raimondii Gorai.008G237000 N 0.736
Gorai.004G110400 Gossypium raimondii Gorai.004G110400 N 0.750
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.917
MLOC_37403 Hordeum vulgare MLOC_37403 N 0.792
LPERR02G05550 Leersia perrieri LPERR02G05550 N 0.792
LPERR02G04770 Leersia perrieri LPERR02G04770 N 0.875
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.903
Lus10009283.g Linum usitatissimum Lus10009283.g N 0.708
Lus10015881.g Linum usitatissimum Lus10015881.g N 0.708
Lus10036226.g Linum usitatissimum Lus10036226.g N 0.757
Lus10038365.g Linum usitatissimum Lus10038365.g N 0.743
Lus10008814.g Linum usitatissimum Lus10008814.g N 0.708
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N 0.806
chr6.CM0037.1230.nd Lotus japonicus chr6.CM0037.1230.nd N 0.722
MDP0000197021 Malus domestica MDP0000197021 N 0.760
MDP0000639526 Malus domestica MDP0000639526 N 0.764
MDP0000891068 Malus domestica MDP0000891068 N 0.773
cassava17724.valid.m1 Manihot esculenta cassava17724.valid.m1 N 0.778
cassava14439.m1 Manihot esculenta cassava14439.m1 N 0.736
cassava11490.m1 Manihot esculenta cassava11490.m1 N 0.861
cassava41034.m1 Manihot esculenta cassava41034.m1 N 0.750
cassava446.valid.m1 Manihot esculenta cassava446.valid.m1 N 0.778
MTR_4g116300 Medicago truncatula MTR_4g116300 N 0.764
mgf020898m Mimulus guttatus mgf020898m N 0.708
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.917
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N 0.889
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N 0.819
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.931
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.931
GSMUA_Achr6G35220_001 Musa acuminata GSMUA_Achr6G35220_001 N 0.792
GSMUA_Achr6G30690_001 Musa acuminata GSMUA_Achr6G30690_001 N 0.792
GSMUA_Achr6G20140_001 Musa acuminata GSMUA_Achr6G20140_001 N 0.847
GSMUA_Achr2G02580_001 Musa acuminata GSMUA_Achr2G02580_001 N 0.861
GSMUA_Achr1G09990_001 Musa acuminata GSMUA_Achr1G09990_001 N 0.806
GSMUA_Achr11G04210_001 Musa acuminata GSMUA_Achr11G04210_001 N 0.778
OBART06G24000 Oryza barthii OBART06G24000 N 0.903
OBART02G05520 Oryza barthii OBART02G05520 N 0.958
OB02G14750 Oryza brachyantha OB02G14750 N 0.958
OB02G15630 Oryza brachyantha OB02G15630 N 0.792
ORGLA02G0058300 Oryza glaberrima ORGLA02G0058300 N 0.792
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.903
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.958
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N 0.889
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.958
BGIOSGA007009 Oryza indica BGIOSGA007009 N 0.792
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.903
OLONG_022199 Oryza longistaminata OLONG_022199 N 0.889
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.903
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.903
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.903
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.958
OPUNC02G05490 Oryza punctata OPUNC02G05490 N 0.792
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.903
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.958
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.958
OS06G0666100 Oryza sativa OS06G0666100 N 0.903
OS02G0183000 Oryza sativa OS02G0183000 N 0.792
OS02G0172800 Oryza sativa OS02G0172800 N 0.958
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N 0.931
Pavir.Ab00641 Panicum virgatum Pavir.Ab00641 N 0.778
Pavir.Da00255 Panicum virgatum Pavir.Da00255 N 0.903
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.986
Pavir.J35161 Panicum virgatum Pavir.J35161 N 0.806
PDK_20s1397531g003 Phoenix dactylifera PDK_20s1397531g003 N 0.778
PDK_20s1316692g001 Phoenix dactylifera PDK_20s1316692g001 N 0.792
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.917
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N 0.847
POPTR_0018s12380 Populus trichocarpa POPTR_0018s12380 N 0.764
POPTR_0006s05950 Populus trichocarpa POPTR_0006s05950 N 0.764
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N 0.861
Pm017841 Prunus mume Pm017841 N 0.708
Pm027672 Prunus mume Pm027672 N 0.764
Pm010795 Prunus mume Pm010795 N 0.822
PRUPE_ppa023785mg Prunus persica PRUPE_ppa023785mg N 0.708
PRUPE_ppa024886mg Prunus persica PRUPE_ppa024886mg N 0.822
PRUPE_ppa019806mg Prunus persica PRUPE_ppa019806mg N 0.750
30090.m000247 Ricinus communis 30090.m000247 N 0.792
29417.m000034 Ricinus communis 29417.m000034 N 0.889
30174.m008836 Ricinus communis 30174.m008836 N 0.708
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N 0.764
SapurV1A.0306s0210 Salix purpurea SapurV1A.0306s0210 N 0.778
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N 0.833
SapurV1A.0104s0310 Salix purpurea SapurV1A.0104s0310 N 0.833
Si019544m.g Setaria italica Si019544m.g N 0.792
Si018139m.g Setaria italica Si018139m.g N 0.986
Si007394m.g Setaria italica Si007394m.g N 0.904
Solyc01g091000.2 Solanum lycopersicum Solyc01g091000.2 N 0.708
Solyc02g068510.1 Solanum lycopersicum Solyc02g068510.1 N 0.778
Solyc07g007320.1 Solanum lycopersicum Solyc07g007320.1 N 0.806
Sb10g026620 Sorghum bicolor Sb10g026620 N 0.903
Sb04g005680 Sorghum bicolor Sb04g005680 N 0.778
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.972
TCM_038233 Theobroma cacao TCM_038233 N 0.764
TCM_006017 Theobroma cacao TCM_006017 N 0.847
TCM_016018 Theobroma cacao TCM_016018 N 0.722
TCM_005554 Theobroma cacao TCM_005554 N 0.708
Traes_6AS_3CC6C63F9 Triticum aestivum Traes_6AS_3CC6C63F9 N 0.792
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.944
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.917
Traes_6BS_A7DE5BFD1 Triticum aestivum Traes_6BS_A7DE5BFD1 N 0.792
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.931
Traes_6DS_9C50DA0DE Triticum aestivum Traes_6DS_9C50DA0DE N 0.792
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.931
TRIUR3_16881 Triticum urartu TRIUR3_16881 N 0.792
TRIUR3_32978 Triticum urartu TRIUR3_32978 N 0.889
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.944
VIT_11s0118g00600 Vitis vinifera VIT_11s0118g00600 N 0.778
VIT_15s0048g00580 Vitis vinifera VIT_15s0048g00580 N 0.722
VIT_00s0233g00100 Vitis vinifera VIT_00s0233g00100 N 0.708
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N 0.819
VIT_02s0154g00150 Vitis vinifera VIT_02s0154g00150 N 0.736
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.958
GRMZM2G070295 Zea mays GRMZM2G070295 N 0.792