Pavir.Eb02108 (Panicum virgatum)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Pavir.Eb02108 T316146_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Eb02108.1.p PLATZ 65 142

Links

Other PLATZ family TFs
Other Panicum virgatum TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J13246 Panicum virgatum Pavir.J13246 N 0.974
Sb08g005380 Sorghum bicolor Sb08g005380 N 0.838
Si004809m.g Setaria italica Si004809m.g N 0.812
TRIUR3_09966 Triticum urartu TRIUR3_09966 N 0.797
Traes_3DL_96F825D26 Triticum aestivum Traes_3DL_96F825D26 N 0.797
MLOC_26846 Hordeum vulgare MLOC_26846 N 0.797
Traes_3AL_970EF6E45 Triticum aestivum Traes_3AL_970EF6E45 N 0.797
Pavir.Ea01651 Panicum virgatum Pavir.Ea01651 N 0.787
Traes_3DL_6A5CA5C37 Triticum aestivum Traes_3DL_6A5CA5C37 N 0.785
TRAES3BF035900140CFD_g Triticum aestivum TRAES3BF035900140CFD_g N 0.785
F775_30314 Aegilops tauschii F775_30314 N 0.785
TRAES3BF035900190CFD_g Triticum aestivum TRAES3BF035900190CFD_g N 0.785
TRAES3BF035900070CFD_g Triticum aestivum TRAES3BF035900070CFD_g N 0.785
GRMZM2G006585 Zea mays GRMZM2G006585 N 0.775
Si004357m.g Setaria italica Si004357m.g N 0.774
Pavir.Eb01352 Panicum virgatum Pavir.Eb01352 N 0.773
Si004634m.g Setaria italica Si004634m.g N 0.773
Traes_3AL_CF608F443 Triticum aestivum Traes_3AL_CF608F443 N 0.772
TRIUR3_27842 Triticum urartu TRIUR3_27842 N 0.772
OPUNC01G18340 Oryza punctata OPUNC01G18340 N 0.765
OGLUM01G21080 Oryza glumaepatula OGLUM01G21080 N 0.765
BGIOSGA001528 Oryza indica BGIOSGA001528 N 0.765
OB01G27340 Oryza brachyantha OB01G27340 N 0.765
OBART01G17820 Oryza barthii OBART01G17820 N 0.765
OS01G0517800 Oryza sativa OS01G0517800 N 0.765
PK29286.1 Cannabis sativa PK29286.1 N 0.764
orange1.1g028382m.g Citrus sinensis orange1.1g028382m.g N 0.764
Ciclev10012756m.g Citrus clementina Ciclev10012756m.g N 0.764
BGIOSGA001527 Oryza indica BGIOSGA001527 N 0.756
OS01G0518000 Oryza sativa OS01G0518000 N 0.756
OMERI01G16670 Oryza meridionalis OMERI01G16670 N 0.756
ORGLA11G0204800 Oryza glaberrima ORGLA11G0204800 N 0.753
ORGLA01G0145800 Oryza glaberrima ORGLA01G0145800 N 0.753
PGSC0003DMG400008598 Solanum tuberosum PGSC0003DMG400008598 N 0.753
OMERI01G16650 Oryza meridionalis OMERI01G16650 N 0.753
Solyc10g085800.1 Solanum lycopersicum Solyc10g085800.1 N 0.753
e_gw1.1.253.1 Physcomitrella patens e_gw1.1.253.1 N 0.750
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N 0.750
GRMZM2G086403 Zea mays GRMZM2G086403 N 0.750
estExt_gwp_gw1.C_1330066 Physcomitrella patens estExt_gwp_gw1.C_1330066 N 0.750
Cucsa.378840 Cucumis sativus Cucsa.378840 N 0.750
Sb07g024020 Sorghum bicolor Sb07g024020 N 0.747
GRMZM2G171934 Zea mays GRMZM2G171934 N 0.747
ORGLA11G0065100 Oryza glaberrima ORGLA11G0065100 N 0.741
OPUNC01G18360 Oryza punctata OPUNC01G18360 N 0.738
OBART01G17850 Oryza barthii OBART01G17850 N 0.738
GLYMA10G07240 Glycine max GLYMA10G07240 N 0.736
PK20928.1 Cannabis sativa PK20928.1 N 0.736
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N 0.736
GRMZM2G131280 Zea mays GRMZM2G131280 N 0.736
evm.TU.supercontig_5.128 Carica papaya evm.TU.supercontig_5.128 N 0.736
Lus10027735.g Linum usitatissimum Lus10027735.g N 0.736
Lus10035554.g Linum usitatissimum Lus10035554.g N 0.736
Cla008966 Citrullus lanatus Cla008966 N 0.736
VIT_08s0007g04560 Vitis vinifera VIT_08s0007g04560 N 0.736
Cucsa.321900 Cucumis sativus Cucsa.321900 N 0.736
POPTR_0006s12100 Populus trichocarpa POPTR_0006s12100 N 0.736
mgf023930m Mimulus guttatus mgf023930m N 0.736
MTR_7g102790 Medicago truncatula MTR_7g102790 N 0.736
GLYMA13G21140 Glycine max GLYMA13G21140 N 0.736
fgenesh1_pg.scaffold_102000043 Physcomitrella patens fgenesh1_pg.scaffold_102000043 N 0.736
GLYMA19G37220 Glycine max GLYMA19G37220 N 0.736
Pavir.Fa00017 Panicum virgatum Pavir.Fa00017 N 0.734
Pavir.Fb02226 Panicum virgatum Pavir.Fb02226 N 0.734
Eucgr.B03915 Eucalyptus grandis Eucgr.B03915 N 0.730
LPERR01G15600 Leersia perrieri LPERR01G15600 N 0.728
ORGLA01G0146000 Oryza glaberrima ORGLA01G0146000 N 0.727
PRUPE_ppa011630mg Prunus persica PRUPE_ppa011630mg N 0.726
Pm026291 Prunus mume Pm026291 N 0.726
gene00954-v1.0-hybrid Fragaria vesca gene00954-v1.0-hybrid N 0.726
OGLUM01G21100 Oryza glumaepatula OGLUM01G21100 N 0.725
Traes_7DS_620E0D488 Triticum aestivum Traes_7DS_620E0D488 N 0.722
Bra016441 Brassica rapa Bra016441 N 0.722
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N 0.722
Traes_7AS_9EA289C71 Triticum aestivum Traes_7AS_9EA289C71 N 0.722
Traes_6DL_CF3557CFC Triticum aestivum Traes_6DL_CF3557CFC N 0.722
BRADI3G52170 Brachypodium distachyon BRADI3G52170 N 0.722
BRADI3G43000 Brachypodium distachyon BRADI3G43000 N 0.722
Ca_00735 Cicer arietinum Ca_00735 N 0.722
Cucsa.313040 Cucumis sativus Cucsa.313040 N 0.722
Cla016461 Citrullus lanatus Cla016461 N 0.722
Pm022874 Prunus mume Pm022874 N 0.722
30054.m000824 Ricinus communis 30054.m000824 N 0.722
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N 0.722
cassava9017.m1 Manihot esculenta cassava9017.m1 N 0.722
Ca_11505 Cicer arietinum Ca_11505 N 0.722
Ca_12361 Cicer arietinum Ca_12361 N 0.722
cassava2216.valid.m1 Manihot esculenta cassava2216.valid.m1 N 0.722
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N 0.722
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N 0.722
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N 0.722
Bo6g120700 Brassica oleracea Bo6g120700 N 0.722
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N 0.722
MDP0000570901 Malus domestica MDP0000570901 N 0.722
BGIOSGA014451 Oryza indica BGIOSGA014451 N 0.722
Pavir.Ga00766 Panicum virgatum Pavir.Ga00766 N 0.722
AT1G76590 Arabidopsis thaliana AT1G76590 N 0.722
LjSGA_028172.2 Lotus japonicus LjSGA_028172.2 N 0.722
Thhalv10019067m.g Eutrema salsugineum Thhalv10019067m.g N 0.722
BGIOSGA005806 Oryza indica BGIOSGA005806 N 0.722
Pavir.Gb00818 Panicum virgatum Pavir.Gb00818 N 0.722
MDP0000553473 Malus domestica MDP0000553473 N 0.722
MDP0000225862 Malus domestica MDP0000225862 N 0.722
Carubv10020852m.g Capsella rubella Carubv10020852m.g N 0.722
F775_22386 Aegilops tauschii F775_22386 N 0.722
Cagra.2281s0027 Capsella grandiflora Cagra.2281s0027 N 0.722
Bostr.20129s0097 Boechera stricta Bostr.20129s0097 N 0.722
Aquca_019_00150 Aquilegia coerulea Aquca_019_00150 N 0.722
Bo8g070540 Brassica oleracea Bo8g070540 N 0.722
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N 0.722
MDP0000133008 Malus domestica MDP0000133008 N 0.722
MDP0000133007 Malus domestica MDP0000133007 N 0.722
gene29145-v1.0-hybrid Fragaria vesca gene29145-v1.0-hybrid N 0.722
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N 0.722
e_gw1.6.367.1 Physcomitrella patens e_gw1.6.367.1 N 0.722
Bra015731 Brassica rapa Bra015731 N 0.722
GRMZM2G004548 Zea mays GRMZM2G004548 N 0.722
Sb04g031230 Sorghum bicolor Sb04g031230 N 0.722
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N 0.722
ORUFI04G25190 Oryza rufipogon ORUFI04G25190 N 0.722
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N 0.722
MLOC_69202 Hordeum vulgare MLOC_69202 N 0.722
Sb06g027000 Sorghum bicolor Sb06g027000 N 0.722
OGLUM04G23440 Oryza glumaepatula OGLUM04G23440 N 0.722
PRUPE_ppa010445mg Prunus persica PRUPE_ppa010445mg N 0.722
GSMUA_Achr4G19110_001 Musa acuminata GSMUA_Achr4G19110_001 N 0.722
OBART02G28660 Oryza barthii OBART02G28660 N 0.722
OS04G0591100 Oryza sativa OS04G0591100 N 0.722
OBART04G23520 Oryza barthii OBART04G23520 N 0.722
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N 0.722
GSMUA_Achr2G18160_001 Musa acuminata GSMUA_Achr2G18160_001 N 0.722
OB02G35810 Oryza brachyantha OB02G35810 N 0.722
OS02G0692700 Oryza sativa OS02G0692700 N 0.722
OB04G30420 Oryza brachyantha OB04G30420 N 0.722
GLYMA09G33770 Glycine max GLYMA09G33770 N 0.722
OLONG_023395 Oryza longistaminata OLONG_023395 N 0.722
OPUNC02G26310 Oryza punctata OPUNC02G26310 N 0.722
OPUNC04G21040 Oryza punctata OPUNC04G21040 N 0.722
GRMZM2G091044 Zea mays GRMZM2G091044 N 0.722
LPERR02G23300 Leersia perrieri LPERR02G23300 N 0.722
fgenesh2_kg.2__1947__AT1G76590.1 Arabidopsis lyrata fgenesh2_kg.2__1947__AT1G76590.1 N 0.722
GLYMA01G02180 Glycine max GLYMA01G02180 N 0.722
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N 0.722
ONIVA04G22750 Oryza nivara ONIVA04G22750 N 0.722
GSMUA_Achr11G17810_001 Musa acuminata GSMUA_Achr11G17810_001 N 0.722
TCM_034802 Theobroma cacao TCM_034802 N 0.722
ORGLA04G0200500 Oryza glaberrima ORGLA04G0200500 N 0.722
MLOC_23439 Hordeum vulgare MLOC_23439 N 0.722
GSMUA_Achr4G27280_001 Musa acuminata GSMUA_Achr4G27280_001 N 0.722
Si010911m.g Setaria italica Si010911m.g N 0.722
LPERR04G19240 Leersia perrieri LPERR04G19240 N 0.722
TCM_022356 Theobroma cacao TCM_022356 N 0.722
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N 0.722
ONIVA02G31400 Oryza nivara ONIVA02G31400 N 0.722
TRIUR3_34039 Triticum urartu TRIUR3_34039 N 0.718
OB08G30470 Oryza brachyantha OB08G30470 N 0.718
orange1.1g028583m.g Citrus sinensis orange1.1g028583m.g N 0.716
evm.TU.supercontig_30.61 Carica papaya evm.TU.supercontig_30.61 N 0.716
Gorai.009G411100 Gossypium raimondii Gorai.009G411100 N 0.712
LPERR08G20370 Leersia perrieri LPERR08G20370 N 0.709
SapurV1A.1507s0030 Salix purpurea SapurV1A.1507s0030 N 0.708
SapurV1A.0555s0010 Salix purpurea SapurV1A.0555s0010 N 0.708
SapurV1A.0554s0100 Salix purpurea SapurV1A.0554s0100 N 0.708
Thhalv10008598m.g Eutrema salsugineum Thhalv10008598m.g N 0.708
GSMUA_Achr5G13970_001 Musa acuminata GSMUA_Achr5G13970_001 N 0.708
GSMUA_Achr8G14740_001 Musa acuminata GSMUA_Achr8G14740_001 N 0.708
gene02186-v1.0-hybrid Fragaria vesca gene02186-v1.0-hybrid N 0.708
MLOC_63157 Hordeum vulgare MLOC_63157 N 0.708
MTR_8g066820 Medicago truncatula MTR_8g066820 N 0.708
Lus10004577.g Linum usitatissimum Lus10004577.g N 0.708
MTR_5g030130 Medicago truncatula MTR_5g030130 N 0.708
Bo5g030950 Brassica oleracea Bo5g030950 N 0.708
MTR_1g062160 Medicago truncatula MTR_1g062160 N 0.708
orange1.1g025742m.g Citrus sinensis orange1.1g025742m.g N 0.708
Cagra.7414s0001 Capsella grandiflora Cagra.7414s0001 N 0.708
30078.m002228 Ricinus communis 30078.m002228 N 0.708
scaffold_102351.1 Arabidopsis lyrata scaffold_102351.1 N 0.708
30170.m013811 Ricinus communis 30170.m013811 N 0.708
cassava13654.valid.m1 Manihot esculenta cassava13654.valid.m1 N 0.708
Traes_2AL_74EFA5757 Triticum aestivum Traes_2AL_74EFA5757 N 0.708
Eucgr.F03621 Eucalyptus grandis Eucgr.F03621 N 0.708
GLYMA08G36641 Glycine max GLYMA08G36641 N 0.708
GLYMA03G34530 Glycine max GLYMA03G34530 N 0.708
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N 0.708
TRIUR3_25489 Triticum urartu TRIUR3_25489 N 0.708
TRIUR3_30366 Triticum urartu TRIUR3_30366 N 0.708
AMTR_s00002p00211460 Amborella trichopoda AMTR_s00002p00211460 N 0.708
Ca_19047 Cicer arietinum Ca_19047 N 0.708
Si017318m.g Setaria italica Si017318m.g N 0.708
Traes_1BL_C202F3DE1 Triticum aestivum Traes_1BL_C202F3DE1 N 0.708
cassava7406.valid.m1 Manihot esculenta cassava7406.valid.m1 N 0.708
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N 0.708
POPTR_0016s10920 Populus trichocarpa POPTR_0016s10920 N 0.708
Aquca_009_01064 Aquilegia coerulea Aquca_009_01064 N 0.708
Bostr.7128s0691 Boechera stricta Bostr.7128s0691 N 0.708
Carubv10009696m.g Capsella rubella Carubv10009696m.g N 0.708
Ciclev10002292m.g Citrus clementina Ciclev10002292m.g N 0.708
Bra025865 Brassica rapa Bra025865 N 0.708
XM_002306973.1 Populus trichocarpa POPTR_0005s28040 N 0.708
Traes_2BL_69847FCA6 Triticum aestivum Traes_2BL_69847FCA6 N 0.708
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N 0.708
POPTR_0002s00430 Populus trichocarpa POPTR_0002s00430 N 0.708
PGSC0003DMG400009931 Solanum tuberosum PGSC0003DMG400009931 N 0.708
F775_28196 Aegilops tauschii F775_28196 N 0.708
mgf013167m Mimulus guttatus mgf013167m N 0.707
SapurV1A.0288s0160 Salix purpurea SapurV1A.0288s0160 N 0.707
mgf006916m Mimulus guttatus mgf006916m N 0.707
PK10752.1 Cannabis sativa PK10752.1 N 0.706
cassava15058.m1 Manihot esculenta cassava15058.m1 N 0.705
Cla018029 Citrullus lanatus Cla018029 N 0.705
POPTR_0009s00830 Populus trichocarpa POPTR_0009s00830 N 0.703
cassava28497.m1 Manihot esculenta cassava28497.m1 N 0.703
GRMZM2G408887 Zea mays GRMZM2G408887 N 0.700