20457_YNL216W (Saccharomyces bayanus)
Rap1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF09197 (Rap1-DNA-bind) IPR015280 20457_YNL216W T316934_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP1
M00378_2.00
Saccharomyces cerevisiae
RGRTGKAYGG

CCRTMCAYCY
PBM
Berger et al.(2006)
Rap1
0.883 0.883
RAP1
M01564_2.00
Saccharomyces cerevisiae
NGGTGYVNDD

HHNBRCACCN
PBM
Zhu et al.(2009)
Rap1
0.883 0.883
RAP1
M07493_2.00
Saccharomyces cerevisiae
TGTWYGGGTG

CACCCRWACA
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0359.1
0.883 0.883
RAP1
M07556_2.00
Saccharomyces cerevisiae
RTGYRYGGGTG

CACCCRYRCAY
ChIP-exo
Rhee et al.(2011)
Rap1_1
0.883 0.883
RAP1
M07557_2.00
Saccharomyces cerevisiae
GTGTGKGTGTG

CACACMCACAC
ChIP-exo
Rhee et al.(2011)
Rap1_2
0.883 0.883
RAP1
M07558_2.00
Saccharomyces cerevisiae
GGTGTGGTGTG

CACACCACACC
ChIP-exo
Rhee et al.(2011)
Rap1_3
0.883 0.883
RAP1
M08599_2.00
Saccharomyces cerevisiae
DRTGTRYGGGTKY

RMACCCRYACAYH
Misc
DeBoer et al.(2011)
YNL216W_254
0.883 0.883
RAP1
M11214_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RAP1_03
0.883 0.883
RAP1
M11215_2.00
Saccharomyces cerevisiae
RRTGTMTGGGTKYD

HRMACCCAKACAYY
Transfac
Matys et al.(2006)
F$RAP1_C
0.883 0.883
RAP1
M11216_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RAP1_Q6
0.883 0.883
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
20457_YNL216W Rap1 165 292
20457_YNL216W Rap1 316 447

Links

Other Rap1 family TFs
Other Saccharomyces bayanus TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
18116_YNL216W Saccharomyces mikatae 18116_YNL216W I 0.895
18547_YNL216W Saccharomyces paradoxus 18547_YNL216W I 0.766
SU7_2890 Saccharomyces arboricola SU7_2890 I 0.830
RAP1 Saccharomyces cerevisiae YNL216W D 0.839