Pvit_04251 (Pogona vitticeps)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Pvit_04251 T317813_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NFATC4
M01306_2.00
Homo sapiens
NNNWWWVYRN

NYRBWWWNNN
PBM
Lambert et al.(2019)
pTH9347
0.923 0.923
NFATC4
M05701_2.00
Homo sapiens
DBTTTCCRYN

NRYGGAAAVH
SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1
0.923 0.923
NFATC4
M05702_2.00
Homo sapiens
NKTTCCATGGAAMV

BKTTCCATGGAAMN
SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2
0.923 0.923
NFATC4
M09345_2.00
Homo sapiens
HNDBTTTCCN

NGGAAAVHND
Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C
0.923 0.923
Nfatc4
M09354_2.00
Mus musculus
HNDBTTTCCN

NGGAAAVHND
Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C
0.923 0.923
NFATC4
M11219_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT3_Q3_01
0.923 0.923
NFATC4
M11220_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT3_Q3
0.923 0.923
NFATC4
M05703_2.00
Homo sapiens
DNTTTCCRYN

NRYGGAAANH
SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1
0.923 0.923
NFATC4
M05704_2.00
Homo sapiens
NKTTCCRYGGAAMN

NKTTCCRYGGAAMN
SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2
0.923 0.923
NFATC3
M02440_2.00
Homo sapiens
DNTTTCCRNN

NNYGGAAANH
PBM
Weirauch et al.(2014)
pTH9192
0.867 0.867
NFATC3
M05693_2.00
Homo sapiens
WNTTTCCRYN

NRYGGAAANW
SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1
0.867 0.867
NFATC3
M05694_2.00
Homo sapiens
NTTTCCATGGAAAN

NTTTCCATGGAAAN
SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2
0.867 0.867
NFATC3
M05695_2.00
Homo sapiens
DYGGAAANNNNNNNTTTCCRH

DYGGAAANNNNNNNTTTCCRH
SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3
0.867 0.867
NFATC3
M09343_2.00
Homo sapiens
RDTTTTCCA

TGGAAAAHY
Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B
0.867 0.867
Nfatc3
M09359_2.00
Mus musculus
RDTTTTCCA

TGGAAAAHY
Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B
0.867 0.867
NFATC3
M11217_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT4_Q3
0.867 0.867
NFATC3
M11218_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT4_Q5
0.867 0.867
NFATC3
M05696_2.00
Homo sapiens
WNTTTCCRYN

NRYGGAAANW
SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1
0.867 0.867
NFATC3
M05697_2.00
Homo sapiens
NTTTCCRYGGAAAN

NTTTCCRYGGAAAN
SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2
0.867 0.867
NFATC3
M05698_2.00
Homo sapiens
RYGGAAANHNNNDNTTTCCRY

RYGGAAANHNNNDNTTTCCRY
SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3
0.867 0.867
NFATC1
M02443_2.00
Meleagris gallopavo
NNTTTCCRNN

NNYGGAAANN
PBM
Weirauch et al.(2014)
pTH8315
0.825 0.825
Nfatc1
M09360_2.00
Mus musculus
KABTCANWBTTTCCW

WGGAAAVWNTGAVTM
Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A
0.825 0.825
NFATC2
M02441_2.00
Homo sapiens
WNTTTCCRHN

NDYGGAAANW
PBM
Weirauch et al.(2014)
pTH9196
0.811 0.811
nfatc1
M02446_2.00
Xenopus tropicalis
NNTTTCCRNN

NNYGGAAANN
PBM
Weirauch et al.(2014)
pTH8557
0.811 0.811
NFATC2
M05705_2.00
Homo sapiens
DTTTCCATGGAAAM

KTTTCCATGGAAAH
SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1
0.811 0.811
NFATC2
M05706_2.00
Homo sapiens
NTTTCCRYNNRYGGAAAN

NTTTCCRYNNRYGGAAAN
SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2
0.811 0.811
NFATC2
M09346_2.00
Homo sapiens
NWTTTTCCW

WGGAAAAWN
Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B
0.811 0.811
Nfatc2
M09357_2.00
Mus musculus
NWTTTTCCW

WGGAAAAWN
Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C
0.811 0.811
NFATC2
M11221_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT1_Q4
0.811 0.811
NFATC2
M11222_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT1_Q5
0.811 0.811
NFATC2
M11223_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT1_Q6
0.811 0.811
NFATC2
M08462_2.00
Homo sapiens
TTTTCCA

TGGAAAA
COMPILED
Mathelier et al.(2014)
MA0152.1
0.811 0.811
NFATC2
M05707_2.00
Homo sapiens
NTTTCCGCGGAAAN

NTTTCCGCGGAAAN
SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1
0.811 0.811
NFATC2
M05708_2.00
Homo sapiens
NTTTCCRYNNRYGGAAAN

NTTTCCRYNNRYGGAAAN
SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2
0.811 0.811
NFATC1
M02444_2.00
Monodelphis domestica
NNDTTCCDNN

NNHGGAAHNN
PBM
Weirauch et al.(2014)
pTH8401
0.804 0.804
NFATC1
M03449_2.00
Homo sapiens
HKGRAAADDNWBTTTCCAYN

NRTGGAAAVWNHHTTTYCMD
SELEX
Jolma et al.(2013)
NFATC1_1
0.769 0.769
NFATC1
M03450_2.00
Homo sapiens
TTTCCAYWRYGGAAA

TTTCCRYWRTGGAAA
SELEX
Jolma et al.(2013)
NFATC1_2
0.769 0.769
NFATC1
M03451_2.00
Homo sapiens
NTTTCCATGGAAAN

NTTTCCATGGAAAN
SELEX
Jolma et al.(2013)
NFATC1_3
0.769 0.769
NFATC1
M02747_2.00
Homo sapiens
DTTCCRYGGAA

TTCCRYGGAAH
SELEX
Jolma et al.(2010)
NFATc1_dimer
0.769 0.769
NFATC1
M02748_2.00
Homo sapiens
GGAANDTTCC

GGAAHNTTCC
SELEX
Jolma et al.(2010)
NFATc1_dimer_type2
0.769 0.769
NFATC1
M02749_2.00
Homo sapiens
WDTTTCCAY

RTGGAAAHW
SELEX
Jolma et al.(2010)
NFATc1_monomer
0.769 0.769
NFATC1
M05711_2.00
Homo sapiens
NTTTCCATGGAAAN

NTTTCCATGGAAAN
SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1
0.769 0.769
NFATC1
M05712_2.00
Homo sapiens
NTTTCCRYNNRYGGAAAN

NTTTCCRYNNRYGGAAAN
SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2
0.769 0.769
NFATC1
M09349_2.00
Homo sapiens
HBYHWBWBTTTCCWB

VWGGAAAVWVWDRVD
Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B
0.769 0.769
NFATC1
M09625_2.00
Homo sapiens
WBTTTCCAYY

RRTGGAAAVW
Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al.
0.769 0.769
NFATC1
M11232_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT2_Q4
0.769 0.769
NFATC1
M11233_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT2_Q5_01
0.769 0.769
NFATC1
M11234_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT2_Q5
0.769 0.769
NFATC1
M05713_2.00
Homo sapiens
NTTTCCRYGGAAAN

NTTTCCRYGGAAAN
SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1
0.769 0.769
NFATC1
M05714_2.00
Homo sapiens
NTTTCCRYNNRYGGAAAN

NTTTCCRYNNRYGGAAAN
SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2
0.769 0.769
ENSTNIG00000018271
M02445_2.00
Tetraodon nigroviridis
DNDTTCCRNN

NNYGGAAHNH
PBM
Weirauch et al.(2014)
pTH9005
0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_04251 Rel 380 539

Links

Other Rel family TFs
Other Pogona vitticeps TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
chr3.CM0460.350.nd Lotus japonicus chr3.CM0460.350.nd N 0.000
Gorai.002G001900 Gossypium raimondii Gorai.002G001900 N 0.000
gene17203-v1.0-hybrid Fragaria vesca gene17203-v1.0-hybrid N 0.000
evm.TU.supercontig_320.2 Carica papaya evm.TU.supercontig_320.2 N 0.000
Eucgr.I01494 Eucalyptus grandis Eucgr.I01494 N 0.000
Ciclev10029007m.g Citrus clementina Ciclev10029007m.g N 0.000
Carubv10014350m.g Capsella rubella Carubv10014350m.g N 0.000
Cagra.0805s0005 Capsella grandiflora Cagra.0805s0005 N 0.000
Bostr.18351s0165 Boechera stricta Bostr.18351s0165 N 0.000
Aquca_015_00469 Aquilegia coerulea Aquca_015_00469 N 0.000
Gorai.003G003900 Gossypium raimondii Gorai.003G003900 N 0.000
Gorai.005G257800 Gossypium raimondii Gorai.005G257800 N 0.000
Thhalv10022800m.g Eutrema salsugineum Thhalv10022800m.g N 0.000
SapurV1A.0218s0020 Salix purpurea SapurV1A.0218s0020 N 0.000
SapurV1A.0080s0480 Salix purpurea SapurV1A.0080s0480 N 0.000
orange1.1g023427m.g Citrus sinensis orange1.1g023427m.g N 0.000
MDP0000868556 Malus domestica MDP0000868556 N 0.000
MDP0000480581 Malus domestica MDP0000480581 N 0.000
Lus10022636.g Linum usitatissimum Lus10022636.g N 0.000
Lus10003333.g Linum usitatissimum Lus10003333.g N 0.000
Gorai.008G038800 Gossypium raimondii Gorai.008G038800 N 0.000
mgf013168m Mimulus guttatus mgf013168m N 0.000
Cucsa.119310 Cucumis sativus Cucsa.119310 N 0.000
cassava30341.valid.m1 Manihot esculenta cassava30341.valid.m1 N 0.000
MTR_4g075980 Medicago truncatula MTR_4g075980 N 0.000
GLYMA12G02540 Glycine max GLYMA12G02540 N 0.000
GLYMA11G10230 Glycine max GLYMA11G10230 N 0.000
Bra037283 Brassica rapa Bra037283 N 0.000
Bra013034 Brassica rapa Bra013034 N 0.000
Bra002018 Brassica rapa Bra002018 N 0.000
Bo9g024360 Brassica oleracea Bo9g024360 N 0.000
Bo7g015050 Brassica oleracea Bo7g015050 N 0.000
Bo3g092020 Brassica oleracea Bo3g092020 N 0.000
POPTR_0004s18860 Populus trichocarpa POPTR_0004s18860 N 0.000
POPTR_0009s14370 Populus trichocarpa POPTR_0009s14370 N 0.000
cassava13355.valid.m1 Manihot esculenta cassava13355.valid.m1 N 0.000
29830.m001415 Ricinus communis 29830.m001415 N 0.000
29797.m000353 Ricinus communis 29797.m000353 N 0.000
Pm020961 Prunus mume Pm020961 N 0.000
Cla007018 Citrullus lanatus Cla007018 N 0.000
Ca_11128 Cicer arietinum Ca_11128 N 0.000
VIT_04s0008g00150 Vitis vinifera VIT_04s0008g00150 N 0.000
TCM_006499 Theobroma cacao TCM_006499 N 0.000
PRUPE_ppa009455mg Prunus persica PRUPE_ppa009455mg N 0.000
anac036 Arabidopsis thaliana AT2G17040 N 0.000