CGI_10009133 (Crassostrea gigas)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 CGI_10009133 T318067_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rfx6
M09365_2.00 		Mus musculus
BDGTWKCYNDG
CHNRGMAACHV		 Misc
Kulakovskiy et al.(2013)
RFX6_MOUSE.H11MO.0.C 		0.653 0.879
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC30109 RFX 186 218

Links

Other RFX family TFs
Other Crassostrea gigas TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ocbimv22008419m.g Octopus bimaculoides Ocbimv22008419m.g I 0.660
LotgiG122187 Lottia gigantea LotgiG122187 I 0.660
Sakowv30020492m.g Saccoglossus kowalevskii Sakowv30020492m.g I 0.658
gw.501.1.1 Branchiostoma floridae gw.501.1.1 I 0.658
SPU_025817 Strongylocentrotus purpuratus SPU_025817 I 0.655
CapteG220726 Capitella teleta CapteG220726 I 0.655
ENSOANG00000020392 Ornithorhynchus anatinus ENSOANG00000020392 I 0.655
NEMVEDRAFT_v1g85569 Nematostella vectensis NEMVEDRAFT_v1g85569 I 0.655
SMAR001902 Strigamia maritima SMAR001902 I 0.654
ENSSTOG00000012365 Ictidomys tridecemlineatus ENSSTOG00000012365 I 0.653
RFX6 Taeniopygia guttata ENSTGUG00000011924 I 0.653
rfx6 Tetraodon nigroviridis ENSTNIG00000009728 I 0.653
RFX6 Tupaia belangeri ENSTBEG00000011557 I 0.653
RFX6 Pteropus vampyrus ENSPVAG00000000614 I 0.653
ENSPPYG00000016960 Pongo abelii ENSPPYG00000016960 I 0.653
ENSPFOG00000003162 Poecilia formosa ENSPFOG00000003162 I 0.653
ENSPSIG00000008368 Pelodiscus sinensis ENSPSIG00000008368 I 0.653
RFX6 Pan troglodytes ENSPTRG00000018540 I 0.653
RFX6 Sorex araneus ENSSARG00000012002 I 0.653
rfx6 Takifugu rubripes ENSTRUG00000008447 I 0.653
ENSSHAG00000009393 Sarcophilus harrisii ENSSHAG00000009393 I 0.653
ENSXMAG00000015726 Xiphophorus maculatus ENSXMAG00000015726 I 0.653
ENSMMUP00000022612 Macaca fascicularis ENSMMUP00000022612 I 0.653
ENSBTAP00000000329-D1 Bos grunniens ENSBTAP00000000329-D1 I 0.653
Gfo_R016155 Geospiza fortis Gfo_R016155 I 0.653
Pvit_05271 Pogona vitticeps Pvit_05271 I 0.653
rfx6.L Xenopus laevis XB-GENE-6488525 I 0.653
Tal_R000797 Tyto alba Tal_R000797 I 0.653
Brh_R008084 Buceros rhinoceros Brh_R008084 I 0.653
Afo_R005589 Aptenodytes forsteri Afo_R005589 I 0.653
RFX6 Vicugna pacos ENSVPAG00000002198 I 0.653
RFX6 Tursiops truncatus ENSTTRG00000011052 I 0.653
rfx6 Xenopus tropicalis XB-GENE-1013164 I 0.653
ENSPANG00000008240 Papio anubis ENSPANG00000008240 I 0.653
Aan_R009636 Calypte anna Aan_R009636 I 0.653
ENSTSYG00000008237 Tarsius syrichta ENSTSYG00000008237 I 0.653
ENSONIG00000015740 Oreochromis niloticus ENSONIG00000015740 I 0.653
Rfx6 Dipodomys ordii ENSDORG00000013591 I 0.653
RFX6 Dasypus novemcinctus ENSDNOG00000019162 I 0.653
rfx6 Danio rerio ENSDARG00000041702 I 0.653
RFX6 Erinaceus europaeus ENSEEUG00000001945 I 0.653
ENSFALG00000011057 Ficedula albicollis ENSFALG00000011057 I 0.653
RFX6 Homo sapiens ENSG00000185002 I 0.653
RFX6 Felis catus ENSFCAG00000018903 I 0.653
ENSCSAG00000015856 Chlorocebus sabaeus ENSCSAG00000015856 I 0.653
RFX6 Cavia porcellus ENSCPOG00000015023 I 0.653
ENSAMXG00000017899 Astyanax mexicanus ENSAMXG00000017899 I 0.653
ENSAMEG00000005843 Ailuropoda melanoleuca ENSAMEG00000005843 I 0.653
RFX6 Anolis carolinensis ENSACAG00000014185 I 0.653
ENSAPLG00000002929 Anas platyrhynchos ENSAPLG00000002929 I 0.653
RFX6 Bos taurus ENSBTAG00000000264 I 0.653
RFX6 Callithrix jacchus ENSCJAG00000004349 I 0.653
RFX6 Canis familiaris ENSCAFG00000000915 I 0.653
rfx6 Gasterosteus aculeatus ENSGACG00000005840 I 0.653
RFX6 Gallus gallus ENSGALG00000014918 I 0.653
Rfx6 Mus musculus ENSMUSG00000019900 D 0.653
ENSMPUG00000014252 Mustela putorius furo ENSMPUG00000014252 I 0.653
RFX6 Monodelphis domestica ENSMODG00000017815 I 0.653
ENSNLEG00000013258 Nomascus leucogenys ENSNLEG00000013258 I 0.653
ENSOARG00000008929 Ovis aries ENSOARG00000008929 I 0.653
RFX6 Otolemur garnettii ENSOGAG00000011937 I 0.653
RFX6 Oryctolagus cuniculus ENSOCUG00000013227 I 0.653
RFX6 Macaca mulatta ENSMMUG00000017189 I 0.653
RFX6 Myotis lucifugus ENSMLUG00000006665 I 0.653
ENSLACG00000004044 Latimeria chalumnae ENSLACG00000004044 I 0.653
ENSGMOG00000018155 Gadus morhua ENSGMOG00000018155 I 0.653
RFX6 Loxodonta africana ENSLAFG00000003465 I 0.653
ENSLOCG00000017133 Lepisosteus oculatus ENSLOCG00000017133 I 0.653
ENSMICG00000009092 Microcebus murinus ENSMICG00000009092 I 0.653
RFX6 Meleagris gallopavo ENSMGAG00000013368 I 0.653
ENSORLG00000018626 Oryzias latipes ENSORLG00000018626 I 0.653