BGIBMGA008907 (Bombyx mori)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 BGIBMGA008907 T319305_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.701 0.701
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.701 0.701
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.701 0.701
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.701 0.701
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.701 0.701
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.701 0.701
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.701 0.701
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.701 0.701
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.701 0.701
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.701 0.701
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.701 0.701
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.701 0.701
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIBMGA008907-TA Runt 1 87

Links

Other Runt family TFs
Other Bombyx mori TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HMEL009767 Heliconius melpomene HMEL009767 N 0.805
MESCA007079 Megaselia scalaris MESCA007079 I 0.800
Runx1 Mus musculus ENSMUSG00000022952 D 0.758
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I 0.736
MCINX000302 Melitaea cinxia MCINX000302 I 0.736
SINV13317 Solenopsis invicta SINV13317 I 0.724
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.724
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.724
AATE002063 Anopheles atroparvus AATE002063 I 0.713
ASTEI07771 Anopheles stephensi ASTEI07771 I 0.713
TC006536 Tribolium castaneum TC006536 I 0.713
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I 0.713
AAEL006160 Aedes aegypti AAEL006160 I 0.713
AFUN010424 Anopheles funestus AFUN010424 I 0.701
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I 0.701
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I 0.701
ENSLOCG00000002744 Lepisosteus oculatus ENSLOCG00000002744 I 0.701
ENSMPUG00000015804 Mustela putorius furo ENSMPUG00000015804 I 0.701
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I 0.701
runx2a Danio rerio ENSDARG00000040261 I 0.701