Bra000308 (Brassica rapa)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Bra000308 T319944_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra000308.1-P RWP-RK 708 757

Links

Other RWP-RK family TFs
Other Brassica rapa TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00001p00009420 Amborella trichopoda AMTR_s00001p00009420 I 0.739
AMTR_s00066p00148680 Amborella trichopoda AMTR_s00066p00148680 I 0.735
Aquca_026_00180 Aquilegia coerulea Aquca_026_00180 I 0.735
Al_scaffold_0005_2880 Arabidopsis lyrata Al_scaffold_0005_2880 I 0.776
fgenesh2_kg.4__2522__AT2G43500.1 Arabidopsis lyrata fgenesh2_kg.4__2522__AT2G43500.1 I 0.776
AT2G43500 Arabidopsis thaliana AT2G43500 I 0.796
NLP9 Arabidopsis thaliana AT3G59580 I 0.776
Bostr.20903s0181 Boechera stricta Bostr.20903s0181 I 0.776
Bostr.25993s0430 Boechera stricta Bostr.25993s0430 I 0.812
BRADI4G20730 Brachypodium distachyon BRADI4G20730 I 0.729
Bo6g076560 Brassica oleracea Bo6g076560 I 0.776
Bo4g194380 Brassica oleracea Bo4g194380 I 0.750
Bo3g036620 Brassica oleracea Bo3g036620 I 0.816
Bo4g019840 Brassica oleracea Bo4g019840 I 0.796
Bra037711 Brassica rapa Bra037711 I 0.755
Bra004767 Brassica rapa Bra004767 I 0.796
Bra003382 Brassica rapa Bra003382 I 0.776
Bra000307 Brassica rapa Bra000307 I 0.816
PK00728.1 Cannabis sativa PK00728.1 I 0.755
Cagra.3706s0034 Capsella grandiflora Cagra.3706s0034 I 0.812
Cagra.5954s0011 Capsella grandiflora Cagra.5954s0011 I 0.796
Carubv10016665m.g Capsella rubella Carubv10016665m.g I 0.776
Carubv10022595m.g Capsella rubella Carubv10022595m.g I 0.812
evm.TU.supercontig_9.328 Carica papaya evm.TU.supercontig_9.328 I 0.755
Ca_02703 Cicer arietinum Ca_02703 I 0.735
Ca_13679 Cicer arietinum Ca_13679 I 0.735
Cla013002 Citrullus lanatus Cla013002 I 0.755
Ciclev10018669m.g Citrus clementina Ciclev10018669m.g I 0.755
orange1.1g001774m.g Citrus sinensis orange1.1g001774m.g I 0.755
Cucsa.095510 Cucumis sativus Cucsa.095510 I 0.755
Eucgr.A00040 Eucalyptus grandis Eucgr.A00040 I 0.714
Thhalv10005779m.g Eutrema salsugineum Thhalv10005779m.g I 0.755
Thhalv10001299m.g Eutrema salsugineum Thhalv10001299m.g I 0.796
gene16194-v1.0-hybrid Fragaria vesca gene16194-v1.0-hybrid I 0.755
GLYMA12G05390 Glycine max GLYMA12G05390 I 0.755
GLYMA11G13390 Glycine max GLYMA11G13390 I 0.755
GLYMA13G42160 Glycine max GLYMA13G42160 I 0.735
GLYMA15G03225 Glycine max GLYMA15G03225 I 0.735
Gorai.005G013500 Gossypium raimondii Gorai.005G013500 I 0.735
Gorai.005G126000 Gossypium raimondii Gorai.005G126000 I 0.755
Gorai.011G138700 Gossypium raimondii Gorai.011G138700 I 0.729
MLOC_66539 Hordeum vulgare MLOC_66539 I 0.769
MLOC_9982 Hordeum vulgare MLOC_9982 I 0.739
Lus10008143.g Linum usitatissimum Lus10008143.g I 0.735
Lus10019368.g Linum usitatissimum Lus10019368.g I 0.735
chr3.LjT23H01.20.nc Lotus japonicus chr3.LjT23H01.20.nc I 0.755
chr3.CM0106.760.nc Lotus japonicus chr3.CM0106.760.nc I 0.755
MDP0000246881 Malus domestica MDP0000246881 I 0.755
MDP0000239938 Malus domestica MDP0000239938 I 0.755
MDP0000265619 Malus domestica MDP0000265619 I 0.750
cassava7989.valid.m1 Manihot esculenta cassava7989.valid.m1 I 0.735
MTR_4g068000 Medicago truncatula MTR_4g068000 I 0.735
MTR_2g099350 Medicago truncatula MTR_2g099350 I 0.735
mgf003368m Mimulus guttatus mgf003368m I 0.735
ORGLA11G0080000 Oryza glaberrima ORGLA11G0080000 I 0.714
OGLUM11G08660 Oryza glumaepatula OGLUM11G08660 I 0.714
BGIOSGA034185 Oryza indica BGIOSGA034185 I 0.714
OLONG_006342 Oryza longistaminata OLONG_006342 I 0.714
OMERI11G08010 Oryza meridionalis OMERI11G08010 I 0.714
ONIVA11G08980 Oryza nivara ONIVA11G08980 I 0.714
ORUFI11G09500 Oryza rufipogon ORUFI11G09500 I 0.714
Pavir.J12413 Panicum virgatum Pavir.J12413 I 0.739
PDK_20s1507761g001 Phoenix dactylifera PDK_20s1507761g001 I 0.735
POPTR_0017s04980 Populus trichocarpa POPTR_0017s04980 I 0.735
POPTR_0007s01530 Populus trichocarpa POPTR_0007s01530 I 0.735
Pm022106 Prunus mume Pm022106 I 0.755
PRUPE_ppa000933mg Prunus persica PRUPE_ppa000933mg I 0.755
30000.m000371 Ricinus communis 30000.m000371 I 0.714
SapurV1A.1186s0030 Salix purpurea SapurV1A.1186s0030 I 0.735
Solyc11g045350.1 Solanum lycopersicum Solyc11g045350.1 I 0.735
PGSC0003DMG400013140 Solanum tuberosum PGSC0003DMG400013140 I 0.735
PGSC0003DMG401005796 Solanum tuberosum PGSC0003DMG401005796 I 0.714
TCM_019949 Theobroma cacao TCM_019949 I 0.755
VIT_05s0094g00020 Vitis vinifera VIT_05s0094g00020 I 0.735