CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra003088
(
Brassica rapa
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
Bra003088
T319946_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra003088.1-P
RWP-RK
122
170
KLELSEIRKYFDRPIMKAAKELNVGLTVLKKRCRELEIYRWPHRKLKSL
Links
Other
RWP-RK
family TFs
Other
Brassica rapa
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo9g108730
Brassica oleracea
Bo9g108730
N
0.980
Thhalv10015321m.g
Eutrema salsugineum
Thhalv10015321m.g
N
0.939
Bostr.26833s0978
Boechera stricta
Bostr.26833s0978
N
0.918
RKD4
Arabidopsis thaliana
AT5G53040
N
0.898
Carubv10028317m.g
Capsella rubella
Carubv10028317m.g
N
0.878
Cagra.0084s0050
Capsella grandiflora
Cagra.0084s0050
N
0.878
fgenesh1_pm.C_scaffold_8001005
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8001005
N
0.878
Bo2g046220
Brassica oleracea
Bo2g046220
N
0.837
Bra022622
Brassica rapa
Bra022622
N
0.837
TCM_015430
Theobroma cacao
TCM_015430
N
0.816
Solyc03g083040.1
Solanum lycopersicum
Solyc03g083040.1
N
0.796
PGSC0003DMG400018531
Solanum tuberosum
PGSC0003DMG400018531
N
0.796
Gorai.003G121600
Gossypium raimondii
Gorai.003G121600
N
0.796
mgf025545m
Mimulus guttatus
mgf025545m
N
0.776
MDP0000819497
Malus domestica
MDP0000819497
N
0.776
MDP0000141137
Malus domestica
MDP0000141137
N
0.776
cassava34339.m1
Manihot esculenta
cassava34339.m1
N
0.776
Pm019768
Prunus mume
Pm019768
N
0.776
PRUPE_ppa015130mg
Prunus persica
PRUPE_ppa015130mg
N
0.776
evm.TU.supercontig_3.98
Carica papaya
evm.TU.supercontig_3.98
N
0.755
30024.m001687
Ricinus communis
30024.m001687
N
0.735
GSMUA_AchrUn_randomG11290_001
Musa acuminata
GSMUA_AchrUn_randomG11290_001
N
0.735
Pavir.Eb01347
Panicum virgatum
Pavir.Eb01347
N
0.714
SapurV1A.0498s0250
Salix purpurea
SapurV1A.0498s0250
N
0.714
Pavir.Ea01492
Panicum virgatum
Pavir.Ea01492
N
0.714
BRADI2G40920
Brachypodium distachyon
BRADI2G40920
N
0.714
GSMUA_Achr4G08610_001
Musa acuminata
GSMUA_Achr4G08610_001
N
0.714
VIT_16s0098g01730
Vitis vinifera
VIT_16s0098g01730
N
0.714
Lus10005921.g
Linum usitatissimum
Lus10005921.g
N
0.714
cassava39076.m1
Manihot esculenta
cassava39076.m1
N
0.714
GLYMA06G13540
Glycine max
GLYMA06G13540
N
0.714