evm.TU.supercontig_423.7 (Carica papaya)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 evm.TU.supercontig_423.7 T321129_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RKD2
M07249_2.00
Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN

NDRGAAGHYGAANVGWCDN
Dap-seq
OMalley et al.(2016)
RKD2_col_a
0.837 0.837
RKD2
M07250_2.00
Arabidopsis thaliana
GWCBBTTCRDMTTCC

GGAAKHYGAAVVGWC
Dap-seq
OMalley et al.(2016)
RKD2_colamp_a
0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_423.7 RWP-RK 155 203

Links

Other RWP-RK family TFs
Other Carica papaya TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL002721 Aedes aegypti AAEL002721 N 0.000
AATE010139 Anopheles atroparvus AATE010139 N 0.000
ASIS020032 Anopheles sinensis ASIS020032 N 0.000
BGIBMGA012124 Bombyx mori BGIBMGA012124 N 0.000
CPIJ007015 Culex quinquefasciatus CPIJ007015 N 0.000
CpipJ_CPIJ007015 Culex pipiens CpipJ_CPIJ007015 N 0.000
emc Drosophila melanogaster FBgn0000575 N 0.000
emc Drosophila yakuba FBgn0028750 N 0.000
GA10048 Drosophila pseudoobscura FBgn0070107 N 0.000
GF10395 Drosophila ananassae FBgn0087436 N 0.000
GH15419 Drosophila grimshawi FBgn0122891 N 0.000
GI13022 Drosophila mojavensis FBgn0135779 N 0.000
GL20711 Drosophila persimilis FBgn0158306 N 0.000
GM14354 Drosophila sechellia FBgn0169279 N 0.000
GD13571 Drosophila simulans FBgn0185281 N 0.000
GJ12114 Drosophila virilis FBgn0199366 N 0.000
GK17519 Drosophila willistoni FBgn0219518 N 0.000
HHAL005705-PA Halyomorpha halys HHAL005705-PA N 0.000
HMEL007972 Heliconius melpomene HMEL007972 N 0.000
KGM_19645 Danaus plexippus KGM_19645 N 0.000
LCUP009604 Lucilia cuprina LCUP009604 N 0.000
LDEC010062 Leptinotarsa decemlineata LDEC010062 N 0.000
MCINX004038 Melitaea cinxia MCINX004038 N 0.000
MDOA010055 Musca domestica MDOA010055 N 0.000
PPAI008829 Phlebotomus papatasi PPAI008829 N 0.000
RPRC005973 Rhodnius prolixus RPRC005973 N 0.000
TC000024 Tribolium castaneum TC000024 N 0.000
YQE_09812 Dendroctonus ponderosae YQE_09812 N 0.000