Lus10001810.g (Linum usitatissimum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Lus10001810.g T321166_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.786 0.786
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10001810 RWP-RK 84 126

Links

Other RWP-RK family TFs
Other Linum usitatissimum TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG401005796 Solanum tuberosum PGSC0003DMG401005796 I 1.000
SapurV1A.0059s0050 Salix purpurea SapurV1A.0059s0050 I 0.879
Lus10003199.g Linum usitatissimum Lus10003199.g I 0.833
POPTR_0003s14300 Populus trichocarpa POPTR_0003s14300 I 0.833
NLP6 Arabidopsis thaliana AT1G64530 I 0.810
fgenesh2_kg.2__24__AT1G64530.1 Arabidopsis lyrata fgenesh2_kg.2__24__AT1G64530.1 I 0.810
PGSC0003DMG402012256 Solanum tuberosum PGSC0003DMG402012256 I 0.810
Solyc08g008410.2 Solanum lycopersicum Solyc08g008410.2 I 0.810
Bra040914 Brassica rapa Bra040914 I 0.810
mgf013203m Mimulus guttatus mgf013203m I 0.810
Bo9g032270 Brassica oleracea Bo9g032270 I 0.810
Thhalv10023271m.g Eutrema salsugineum Thhalv10023271m.g I 0.810
NLP3 Oryza sativa OS01G0236700 I 0.786
OBART01G08660 Oryza barthii OBART01G08660 I 0.786
ONIVA01G11240 Oryza nivara ONIVA01G11240 I 0.786
Aquca_010_00024 Aquilegia coerulea Aquca_010_00024 I 0.786
OB04G24560 Oryza brachyantha OB04G24560 I 0.786
LPERR01G07660 Leersia perrieri LPERR01G07660 I 0.786
OB01G18870 Oryza brachyantha OB01G18870 I 0.786
POPTR_0001s10970 Populus trichocarpa POPTR_0001s10970 I 0.786
BGIOSGA003095 Oryza indica BGIOSGA003095 I 0.786
SapurV1A.0374s0240 Salix purpurea SapurV1A.0374s0240 I 0.786
OGLUM01G09910 Oryza glumaepatula OGLUM01G09910 I 0.786
OPUNC01G08520 Oryza punctata OPUNC01G08520 I 0.786
OLONG_009319 Oryza longistaminata OLONG_009319 I 0.786
OMERI01G08690 Oryza meridionalis OMERI01G08690 I 0.786
OLONG_005878 Oryza longistaminata OLONG_005878 I 0.786
ORGLA01G0077900 Oryza glaberrima ORGLA01G0077900 I 0.786
GLYMA09G25230 Glycine max GLYMA09G25230 I 0.786
Eucgr.E01022 Eucalyptus grandis Eucgr.E01022 I 0.786
ORUFI01G09470 Oryza rufipogon ORUFI01G09470 I 0.786
ONIVA04G15630 Oryza nivara ONIVA04G15630 I 0.762
ORGLA04G0144400 Oryza glaberrima ORGLA04G0144400 I 0.762
chr3.LjT23H01.20.nc Lotus japonicus chr3.LjT23H01.20.nc I 0.762
ORUFI04G18750 Oryza rufipogon ORUFI04G18750 I 0.762
PRUPE_ppa000933mg Prunus persica PRUPE_ppa000933mg I 0.762
evm.TU.supercontig_9.328 Carica papaya evm.TU.supercontig_9.328 I 0.762
orange1.1g001774m.g Citrus sinensis orange1.1g001774m.g I 0.762
gene16194-v1.0-hybrid Fragaria vesca gene16194-v1.0-hybrid I 0.762
Gorai.005G126000 Gossypium raimondii Gorai.005G126000 I 0.762
MDP0000132856 Malus domestica MDP0000132856 I 0.762
MDP0000246881 Malus domestica MDP0000246881 I 0.762
Ciclev10018669m.g Citrus clementina Ciclev10018669m.g I 0.762
Carubv10022595m.g Capsella rubella Carubv10022595m.g I 0.762
TCM_019949 Theobroma cacao TCM_019949 I 0.762
MDP0000239938 Malus domestica MDP0000239938 I 0.762
Pm022106 Prunus mume Pm022106 I 0.762
cassava7989.valid.m1 Manihot esculenta cassava7989.valid.m1 I 0.762
Cagra.3706s0034 Capsella grandiflora Cagra.3706s0034 I 0.762
Bostr.25993s0430 Boechera stricta Bostr.25993s0430 I 0.762
PK00728.1 Cannabis sativa PK00728.1 I 0.762
OS04G0495800 Oryza sativa OS04G0495800 I 0.762
GLYMA11G13390 Glycine max GLYMA11G13390 I 0.762
GLYMA12G05390 Glycine max GLYMA12G05390 I 0.762
OBART04G17320 Oryza barthii OBART04G17320 I 0.762
MTR_4g068000 Medicago truncatula MTR_4g068000 I 0.762
OMERI04G14630 Oryza meridionalis OMERI04G14630 I 0.762
BGIOSGA016686 Oryza indica BGIOSGA016686 I 0.762
TRIUR3_22305 Triticum urartu TRIUR3_22305 I 0.738
MDP0000265619 Malus domestica MDP0000265619 I 0.738
MDP0000788505 Malus domestica MDP0000788505 I 0.738
Pavir.Ga01502 Panicum virgatum Pavir.Ga01502 I 0.738
GRMZM2G176655 Zea mays GRMZM2G176655 I 0.738
GRMZM2G105004 Zea mays GRMZM2G105004 I 0.738
Traes_4AL_F5C91EC4A Triticum aestivum Traes_4AL_F5C91EC4A I 0.738
GRMZM2G031398 Zea mays GRMZM2G031398 I 0.738
Gorai.011G138700 Gossypium raimondii Gorai.011G138700 I 0.738
Carubv10006357m.g Capsella rubella Carubv10006357m.g I 0.738
BRADI4G20730 Brachypodium distachyon BRADI4G20730 I 0.738
Cagra.1383s0021 Capsella grandiflora Cagra.1383s0021 I 0.738
Bostr.25542s0020 Boechera stricta Bostr.25542s0020 I 0.738
SapurV1A.0035s0170 Salix purpurea SapurV1A.0035s0170 I 0.738
OMERI11G08010 Oryza meridionalis OMERI11G08010 I 0.738
estExt_gwp_gw1.C_1280044 Physcomitrella patens estExt_gwp_gw1.C_1280044 I 0.738
Sb06g021370 Sorghum bicolor Sb06g021370 I 0.738
chr2.CM0904.130.nd Lotus japonicus chr2.CM0904.130.nd I 0.738
BGIOSGA034185 Oryza indica BGIOSGA034185 I 0.738
ORUFI11G09500 Oryza rufipogon ORUFI11G09500 I 0.738
Bo4g194380 Brassica oleracea Bo4g194380 I 0.738
OGLUM11G08660 Oryza glumaepatula OGLUM11G08660 I 0.738
ORGLA11G0080000 Oryza glaberrima ORGLA11G0080000 I 0.738
ONIVA11G08980 Oryza nivara ONIVA11G08980 I 0.738
OLONG_006342 Oryza longistaminata OLONG_006342 I 0.738
PDK_20s1462471g002 Phoenix dactylifera PDK_20s1462471g002 I 0.738
SapurV1A.0266s0390 Salix purpurea SapurV1A.0266s0390 I 0.738
MLOC_13610 Hordeum vulgare MLOC_13610 I 0.738
BGIOSGA011521 Oryza indica BGIOSGA011521 I 0.714
fgenesh1_pg.C_scaffold_7000014 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7000014 I 0.714
fgenesh2_kg.2__1918__AT1G76350.1 Arabidopsis lyrata fgenesh2_kg.2__1918__AT1G76350.1 I 0.714
PK12462.1 Cannabis sativa PK12462.1 I 0.714
BRADI1G76340 Brachypodium distachyon BRADI1G76340 I 0.714
Lus10014428.g Linum usitatissimum Lus10014428.g I 0.714
Gorai.008G041100 Gossypium raimondii Gorai.008G041100 I 0.714
NLP5 Arabidopsis thaliana AT1G76350 I 0.714
chr2.CM0102.390.nc Lotus japonicus chr2.CM0102.390.nc I 0.714
Bra015758 Brassica rapa Bra015758 I 0.714
GLYMA02G48080 Glycine max GLYMA02G48080 I 0.714
orange1.1g004975m.g Citrus sinensis orange1.1g004975m.g I 0.714
Pavir.Ia04472 Panicum virgatum Pavir.Ia04472 I 0.714
Pavir.J25840 Panicum virgatum Pavir.J25840 I 0.714
SapurV1A.0016s0650 Salix purpurea SapurV1A.0016s0650 I 0.714
Bo6g120380 Brassica oleracea Bo6g120380 I 0.714
SapurV1A.0374s0230 Salix purpurea SapurV1A.0374s0230 I 0.714
Bra012241 Brassica rapa Bra012241 I 0.714
Thhalv10018128m.g Eutrema salsugineum Thhalv10018128m.g I 0.714
Bo7g061470 Brassica oleracea Bo7g061470 I 0.714
SapurV1A.3634s0010 Salix purpurea SapurV1A.3634s0010 I 0.714
Lus10023930.g Linum usitatissimum Lus10023930.g I 0.714
Bostr.20129s0072 Boechera stricta Bostr.20129s0072 I 0.714
MTR_5g099060 Medicago truncatula MTR_5g099060 I 0.714
OB03G12460 Oryza brachyantha OB03G12460 I 0.714
NLP1 Oryza sativa OS03G0131100 I 0.714
POPTR_0002s01060 Populus trichocarpa POPTR_0002s01060 I 0.714
LPERR03G02280 Leersia perrieri LPERR03G02280 I 0.714
GSMUA_Achr2G05790_001 Musa acuminata GSMUA_Achr2G05790_001 I 0.714
POPTR_0005s27310 Populus trichocarpa POPTR_0005s27310 I 0.714
OBART03G02480 Oryza barthii OBART03G02480 I 0.714
ORUFI03G02230 Oryza rufipogon ORUFI03G02230 I 0.714
OMERI03G02340 Oryza meridionalis OMERI03G02340 I 0.714
ONIVA03G02090 Oryza nivara ONIVA03G02090 I 0.714
OPUNC03G02270 Oryza punctata OPUNC03G02270 I 0.714
OLONG_004527 Oryza longistaminata OLONG_004527 I 0.714
OGLUM03G02410 Oryza glumaepatula OGLUM03G02410 I 0.714
ORGLA03G0022700 Oryza glaberrima ORGLA03G0022700 I 0.714
Ciclev10027765m.g Citrus clementina Ciclev10027765m.g I 0.714
Sb01g048290 Sorghum bicolor Sb01g048290 I 0.714
Cagra.0805s0015 Capsella grandiflora Cagra.0805s0015 I 0.714
Bostr.18351s0175 Boechera stricta Bostr.18351s0175 I 0.714
Carubv10004068m.g Capsella rubella Carubv10004068m.g I 0.714
Carubv10012927m.g Capsella rubella Carubv10012927m.g I 0.714
GLYMA04G00210 Glycine max GLYMA04G00210 I 0.714
GLYMA06G00240 Glycine max GLYMA06G00240 I 0.714
GLYMA14G00470 Glycine max GLYMA14G00470 I 0.714
GRMZM2G042278 Zea mays GRMZM2G042278 I 0.714
GRMZM2G109509 Zea mays GRMZM2G109509 I 0.714
TCM_006453 Theobroma cacao TCM_006453 I 0.714
TCM_034391 Theobroma cacao TCM_034391 I 0.714
VIT_03s0038g03710 Vitis vinifera VIT_03s0038g03710 I 0.714
30170.m014365 Ricinus communis 30170.m014365 I 0.714
Ca_09832 Cicer arietinum Ca_09832 I 0.714
Si034133m.g Setaria italica Si034133m.g I 0.714
OPUNC04G15130 Oryza punctata OPUNC04G15130 I 0.708