Pavir.Gb01773 (Panicum virgatum)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04689 (S1FA) IPR006779 Pavir.Gb01773 T321518_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Gb01773.1.p S1FA 61 126

Links

Other S1FA family TFs
Other Panicum virgatum TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27964.m000369 Ricinus communis 27964.m000369 I 0.000
28200.m000189 Ricinus communis 28200.m000189 I 0.000
29725.m000235 Ricinus communis 29725.m000235 I 0.000
30068.m002591 Ricinus communis 30068.m002591 I 0.000
ANAC070 Arabidopsis lyrata Al_scaffold_0006_3164 I 0.000
AMTR_s00068p00207380 Amborella trichopoda AMTR_s00068p00207380 I 0.000
AMTR_s00099p00131560 Amborella trichopoda AMTR_s00099p00131560 I 0.000
AMTR_s00113p00077540 Amborella trichopoda AMTR_s00113p00077540 I 0.000
Aquca_013_00692 Aquilegia coerulea Aquca_013_00692 I 0.000
Aquca_014_00032 Aquilegia coerulea Aquca_014_00032 I 0.000
Aquca_030_00252 Aquilegia coerulea Aquca_030_00252 I 0.000
Aquca_037_00272 Aquilegia coerulea Aquca_037_00272 I 0.000
NAC012 Arabidopsis thaliana AT1G32770 D 0.000
SMB Arabidopsis thaliana AT1G79580 D 0.000
NAC043 Arabidopsis thaliana AT2G46770 D 0.000
NAC066 Arabidopsis thaliana AT3G61910 D 0.000
BRN2 Arabidopsis thaliana AT4G10350 D 0.000
BGIOSGA007898 Oryza indica BGIOSGA007898 I 0.000
BGIOSGA015018 Oryza indica BGIOSGA015018 I 0.000
BGIOSGA021116 Oryza indica BGIOSGA021116 I 0.000
BGIOSGA022006 Oryza indica BGIOSGA022006 I 0.000
BGIOSGA027883 Oryza indica BGIOSGA027883 I 0.000
BGIOSGA034998 Oryza indica BGIOSGA034998 I 0.000
Bo2g095440 Brassica oleracea Bo2g095440 I 0.000
Bo4g006990 Brassica oleracea Bo4g006990 I 0.000
Bo4g197330 Brassica oleracea Bo4g197330 I 0.000
Bo5g049360 Brassica oleracea Bo5g049360 I 0.000
Bo5g086900 Brassica oleracea Bo5g086900 I 0.000
Bo6g079180 Brassica oleracea Bo6g079180 I 0.000
Bo6g080930 Brassica oleracea Bo6g080930 I 0.000
Bo6g123980 Brassica oleracea Bo6g123980 I 0.000
Bo9g088300 Brassica oleracea Bo9g088300 I 0.000
Bostr.13158s0196 Boechera stricta Bostr.13158s0196 I 0.000
Bostr.20129s0396 Boechera stricta Bostr.20129s0396 I 0.000
Bostr.25463s0283 Boechera stricta Bostr.25463s0283 I 0.000
Bostr.25993s0090 Boechera stricta Bostr.25993s0090 I 0.000
Bostr.3359s0081 Boechera stricta Bostr.3359s0081 I 0.000
Bra003478 Brassica rapa Bra003478 I 0.000
Bra003602 Brassica rapa Bra003602 I 0.000
Bra004509 Brassica rapa Bra004509 I 0.000
Bra007640 Brassica rapa Bra007640 I 0.000
Bra008423 Brassica rapa Bra008423 I 0.000
Bra010183 Brassica rapa Bra010183 I 0.000
Bra023288 Brassica rapa Bra023288 I 0.000
Bra035127 Brassica rapa Bra035127 I 0.000
Bra037914 Brassica rapa Bra037914 I 0.000
Bra040486 Brassica rapa Bra040486 I 0.000
BRADI1G38730 Brachypodium distachyon BRADI1G38730 I 0.000
BRADI3G09520 Brachypodium distachyon BRADI3G09520 I 0.000
BRADI3G13727 Brachypodium distachyon BRADI3G13727 I 0.000
Cagra.0050s0024 Capsella grandiflora Cagra.0050s0024 I 0.000
Cagra.0483s0052 Capsella grandiflora Cagra.0483s0052 I 0.000
Cagra.12686s0005 Capsella grandiflora Cagra.12686s0005 I 0.000
Cagra.14513s0001 Capsella grandiflora Cagra.14513s0001 I 0.000
Cagra.1725s0032 Capsella grandiflora Cagra.1725s0032 I 0.000
Carubv10003879m.g Capsella rubella Carubv10003879m.g I 0.000
Carubv10011900m.g Capsella rubella Carubv10011900m.g I 0.000
Carubv10019223m.g Capsella rubella Carubv10019223m.g I 0.000
Carubv10020504m.g Capsella rubella Carubv10020504m.g I 0.000
Carubv10023503m.g Capsella rubella Carubv10023503m.g I 0.000
cassava24947.valid.m1 Manihot esculenta cassava24947.valid.m1 I 0.000
cassava32649.m1 Manihot esculenta cassava32649.m1 I 0.000
cassava32687.m1 Manihot esculenta cassava32687.m1 I 0.000
cassava33021.m1 Manihot esculenta cassava33021.m1 I 0.000
cassava39971.m1 Manihot esculenta cassava39971.m1 I 0.000
cassava42638.valid.m1 Manihot esculenta cassava42638.valid.m1 I 0.000
cassava45846.m1 Manihot esculenta cassava45846.m1 I 0.000
Ca_13929 Cicer arietinum Ca_13929 I 0.000
Ca_15792 Cicer arietinum Ca_15792 I 0.000
Ca_22425 Cicer arietinum Ca_22425 I 0.000
Ca_22426 Cicer arietinum Ca_22426 I 0.000
Ciclev10021141m.g Citrus clementina Ciclev10021141m.g I 0.000
Ciclev10024035m.g Citrus clementina Ciclev10024035m.g I 0.000
Ciclev10026114m.g Citrus clementina Ciclev10026114m.g I 0.000
Cla005561 Citrullus lanatus Cla005561 I 0.000
Cla006806 Citrullus lanatus Cla006806 I 0.000
Cla011508 Citrullus lanatus Cla011508 I 0.000
Cucsa.120870 Cucumis sativus Cucsa.120870 I 0.000
Cucsa.193460 Cucumis sativus Cucsa.193460 I 0.000
Cucsa.240210 Cucumis sativus Cucsa.240210 I 0.000
Eucgr.D01671 Eucalyptus grandis Eucgr.D01671 I 0.000
Eucgr.E01053 Eucalyptus grandis Eucgr.E01053 I 0.000
evm.TU.supercontig_118.26 Carica papaya evm.TU.supercontig_118.26 I 0.000
evm.TU.supercontig_37.89 Carica papaya evm.TU.supercontig_37.89 I 0.000
evm.TU.supercontig_6.226 Carica papaya evm.TU.supercontig_6.226 I 0.000
F775_11081 Aegilops tauschii F775_11081 I 0.000
F775_21626 Aegilops tauschii F775_21626 I 0.000
F775_21627 Aegilops tauschii F775_21627 I 0.000
F775_42361 Aegilops tauschii F775_42361 I 0.000
ANAC012 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002619 I 0.000
gene01881-v1.0-hybrid Fragaria vesca gene01881-v1.0-hybrid I 0.000
gene18635-v1.0-hybrid Fragaria vesca gene18635-v1.0-hybrid I 0.000
gene18636-v1.0-hybrid Fragaria vesca gene18636-v1.0-hybrid I 0.000
gene19898-v1.0-hybrid Fragaria vesca gene19898-v1.0-hybrid I 0.000
GLYMA07G05660 Glycine max GLYMA07G05660 I 0.000
GLYMA08G17140 Glycine max GLYMA08G17140 I 0.000
GLYMA09G36820 Glycine max GLYMA09G36820 I 0.000
GLYMA15G42050 Glycine max GLYMA15G42050 I 0.000
GLYMA16G02200 Glycine max GLYMA16G02200 I 0.000
GLYMA19G44890 Glycine max GLYMA19G44890 I 0.000
GLYMA19G44910 Glycine max GLYMA19G44910 N 0.000
Gorai.001G150800 Gossypium raimondii Gorai.001G150800 I 0.000
Gorai.003G077700 Gossypium raimondii Gorai.003G077700 I 0.000
Gorai.004G129200 Gossypium raimondii Gorai.004G129200 I 0.000
Gorai.004G268500 Gossypium raimondii Gorai.004G268500 I 0.000
Gorai.006G205300 Gossypium raimondii Gorai.006G205300 I 0.000
Gorai.007G112500 Gossypium raimondii Gorai.007G112500 I 0.000
Gorai.008G130300 Gossypium raimondii Gorai.008G130300 I 0.000
Gorai.008G259700 Gossypium raimondii Gorai.008G259700 I 0.000
GRMZM2G041746 Zea mays GRMZM2G041746 I 0.000
GRMZM2G069047 Zea mays GRMZM2G069047 I 0.000
GRMZM2G091490 Zea mays GRMZM2G091490 I 0.000
GRMZM2G092465 Zea mays GRMZM2G092465 I 0.000
GRMZM2G099144 Zea mays GRMZM2G099144 I 0.000
GRMZM2G104074 Zea mays GRMZM2G104074 I 0.000
GRMZM2G155816 Zea mays GRMZM2G155816 I 0.000
GRMZM2G171395 Zea mays GRMZM2G171395 I 0.000
GSMUA_Achr10G14400_001 Musa acuminata GSMUA_Achr10G14400_001 I 0.000
GSMUA_Achr10G21750_001 Musa acuminata GSMUA_Achr10G21750_001 I 0.000
GSMUA_Achr2G20020_001 Musa acuminata GSMUA_Achr2G20020_001 I 0.000
GSMUA_Achr3G12230_001 Musa acuminata GSMUA_Achr3G12230_001 I 0.000
GSMUA_Achr7G05980_001 Musa acuminata GSMUA_Achr7G05980_001 I 0.000
GSMUA_Achr9G24450_001 Musa acuminata GSMUA_Achr9G24450_001 I 0.000
GSMUA_AchrUn_randomG21980_001 Musa acuminata GSMUA_AchrUn_randomG21980_001 I 0.000
LjSGA_027787.1 Lotus japonicus LjSGA_027787.1 I 0.000
LjSGA_059487.1 Lotus japonicus LjSGA_059487.1 I 0.000
LPERR02G09170 Leersia perrieri LPERR02G09170 I 0.000
LPERR06G01790 Leersia perrieri LPERR06G01790 I 0.000
LPERR06G14120 Leersia perrieri LPERR06G14120 I 0.000
LPERR08G01440 Leersia perrieri LPERR08G01440 I 0.000
Lus10001664.g Linum usitatissimum Lus10001664.g I 0.000
Lus10002687.g Linum usitatissimum Lus10002687.g I 0.000
Lus10008271.g Linum usitatissimum Lus10008271.g I 0.000
Lus10009939.g Linum usitatissimum Lus10009939.g I 0.000
Lus10017340.g Linum usitatissimum Lus10017340.g I 0.000
Lus10030143.g Linum usitatissimum Lus10030143.g I 0.000
Lus10030205.g Linum usitatissimum Lus10030205.g I 0.000
Lus10032238.g Linum usitatissimum Lus10032238.g I 0.000
Lus10033239.g Linum usitatissimum Lus10033239.g I 0.000
MDP0000140229 Malus domestica MDP0000140229 I 0.000
MDP0000257674 Malus domestica MDP0000257674 I 0.000
MDP0000501518 Malus domestica MDP0000501518 I 0.000
MDP0000563165 Malus domestica MDP0000563165 I 0.000
MDP0000652584 Malus domestica MDP0000652584 I 0.000
MDP0000762302 Malus domestica MDP0000762302 D 0.000
mg017416m Mimulus guttatus mg017416m I 0.000
mgf022455m Mimulus guttatus mgf022455m I 0.000
mgf025569m Mimulus guttatus mgf025569m I 0.000
MLOC_17128 Hordeum vulgare MLOC_17128 I 0.000
MLOC_66924 Hordeum vulgare MLOC_66924 I 0.000
MTR_2g062730 Medicago truncatula MTR_2g062730 I 0.000
MTR_4g035590 Medicago truncatula MTR_4g035590 I 0.000
MTR_8g024480 Medicago truncatula MTR_8g024480 I 0.000
OB02G19660 Oryza brachyantha OB02G19660 I 0.000
OB04G21050 Oryza brachyantha OB04G21050 I 0.000
OB06G11970 Oryza brachyantha OB06G11970 I 0.000
OB06G24850 Oryza brachyantha OB06G24850 I 0.000
OB08G11290 Oryza brachyantha OB08G11290 I 0.000
OBART02G10820 Oryza barthii OBART02G10820 I 0.000
OBART04G13830 Oryza barthii OBART04G13830 I 0.000
OBART06G01950 Oryza barthii OBART06G01950 I 0.000
OBART06G17120 Oryza barthii OBART06G17120 I 0.000
OBART08G01110 Oryza barthii OBART08G01110 I 0.000
OGLUM02G10770 Oryza glumaepatula OGLUM02G10770 I 0.000
OGLUM04G13590 Oryza glumaepatula OGLUM04G13590 I 0.000
OGLUM06G01950 Oryza glumaepatula OGLUM06G01950 I 0.000
OGLUM06G18230 Oryza glumaepatula OGLUM06G18230 I 0.000
OGLUM08G01180 Oryza glumaepatula OGLUM08G01180 I 0.000
OLONG_007664 Oryza longistaminata OLONG_007664 I 0.000
OLONG_020428 Oryza longistaminata OLONG_020428 I 0.000
OMERI06G01850 Oryza meridionalis OMERI06G01850 I 0.000
OMERI06G17980 Oryza meridionalis OMERI06G17980 I 0.000
OMERI08G01360 Oryza meridionalis OMERI08G01360 I 0.000
ONIVA02G12010 Oryza nivara ONIVA02G12010 I 0.000
ONIVA04G12040 Oryza nivara ONIVA04G12040 I 0.000
ONIVA06G02290 Oryza nivara ONIVA06G02290 I 0.000
ONIVA06G20460 Oryza nivara ONIVA06G20460 I 0.000
ONIVA08G01130 Oryza nivara ONIVA08G01130 I 0.000
OPUNC02G09610 Oryza punctata OPUNC02G09610 I 0.000
OPUNC06G01800 Oryza punctata OPUNC06G01800 I 0.000
OPUNC06G15490 Oryza punctata OPUNC06G15490 I 0.000
OPUNC08G01110 Oryza punctata OPUNC08G01110 I 0.000
orange1.1g014260m.g Citrus sinensis orange1.1g014260m.g I 0.000
orange1.1g015853m.g Citrus sinensis orange1.1g015853m.g I 0.000
orange1.1g021187m.g Citrus sinensis orange1.1g021187m.g I 0.000
ORGLA02G0097800 Oryza glaberrima ORGLA02G0097800 I 0.000
ORGLA06G0019800 Oryza glaberrima ORGLA06G0019800 I 0.000
ORGLA08G0004900 Oryza glaberrima ORGLA08G0004900 I 0.000
ORUFI02G10740 Oryza rufipogon ORUFI02G10740 I 0.000
ORUFI06G01950 Oryza rufipogon ORUFI06G01950 I 0.000
ORUFI06G18140 Oryza rufipogon ORUFI06G18140 I 0.000
ORUFI08G01170 Oryza rufipogon ORUFI08G01170 I 0.000
OS02G0252200 Oryza sativa OS02G0252200 I 0.000
OS06G0131700 Oryza sativa OS06G0131700 D 0.000
OS06G0530400 Oryza sativa OS06G0530400 I 0.000
OS08G0115800 Oryza sativa OS08G0115800 I 0.000
Pavir.Aa02770 Panicum virgatum Pavir.Aa02770 I 0.000
Pavir.Ab01037 Panicum virgatum Pavir.Ab01037 I 0.000
Pavir.Da01009 Panicum virgatum Pavir.Da01009 I 0.000
Pavir.Gb01599 Panicum virgatum Pavir.Gb01599 I 0.000
Pavir.J05053 Panicum virgatum Pavir.J05053 I 0.000
Pavir.J07268 Panicum virgatum Pavir.J07268 I 0.000
Pavir.J07835 Panicum virgatum Pavir.J07835 I 0.000
Pavir.J20698 Panicum virgatum Pavir.J20698 I 0.000
Pavir.J21162 Panicum virgatum Pavir.J21162 I 0.000
PDK_20s1408241g001 Phoenix dactylifera PDK_20s1408241g001 I 0.000
PGSC0003DMG400009665 Solanum tuberosum PGSC0003DMG400009665 I 0.000
PGSC0003DMG400011268 Solanum tuberosum PGSC0003DMG400011268 I 0.000
PGSC0003DMG400012113 Solanum tuberosum PGSC0003DMG400012113 I 0.000
PK04961.1 Cannabis sativa PK04961.1 I 0.000
PK10271.1 Cannabis sativa PK10271.1 I 0.000
PK22182.1 Cannabis sativa PK22182.1 I 0.000
Pm010886 Prunus mume Pm010886 I 0.000
Pm018292 Prunus mume Pm018292 I 0.000
Pm024260 Prunus mume Pm024260 I 0.000
POPTR_0001s00220 Populus trichocarpa POPTR_0001s00220 I 0.000
POPTR_0001s45250 Populus trichocarpa POPTR_0001s45250 I 0.000
POPTR_0002s17950 Populus trichocarpa POPTR_0002s17950 I 0.000
POPTR_0003s11250 Populus trichocarpa POPTR_0003s11250 I 0.000
POPTR_0005s11870 Populus trichocarpa POPTR_0005s11870 I 0.000
POPTR_0008s07950 Populus trichocarpa POPTR_0008s07950 I 0.000
POPTR_0010s18420 Populus trichocarpa POPTR_0010s18420 I 0.000
POPTR_0011s15640 Populus trichocarpa POPTR_0011s15640 I 0.000
PRUPE_ppa006801mg Prunus persica PRUPE_ppa006801mg I 0.000
PRUPE_ppa020746mg Prunus persica PRUPE_ppa020746mg I 0.000
PRUPE_ppa025341mg Prunus persica PRUPE_ppa025341mg I 0.000
SapurV1A.0003s0530 Salix purpurea SapurV1A.0003s0530 I 0.000
SapurV1A.0093s0460 Salix purpurea SapurV1A.0093s0460 I 0.000
SapurV1A.0131s0060 Salix purpurea SapurV1A.0131s0060 I 0.000
SapurV1A.0162s0220 Salix purpurea SapurV1A.0162s0220 I 0.000
SapurV1A.0164s0070 Salix purpurea SapurV1A.0164s0070 I 0.000
SapurV1A.0487s0230 Salix purpurea SapurV1A.0487s0230 I 0.000
SapurV1A.0941s0070 Salix purpurea SapurV1A.0941s0070 I 0.000
SapurV1A.1275s0070 Salix purpurea SapurV1A.1275s0070 I 0.000
SapurV1A.2717s0010 Salix purpurea SapurV1A.2717s0010 I 0.000
Sb04g009180 Sorghum bicolor Sb04g009180 I 0.000
Sb06g017720 Sorghum bicolor Sb06g017720 I 0.000
Sb07g001550 Sorghum bicolor Sb07g001550 I 0.000
Sb10g002120 Sorghum bicolor Sb10g002120 I 0.000
Sb10g020860 Sorghum bicolor Sb10g020860 I 0.000
SMB Arabidopsis lyrata scaffold_202942.1 I 0.000
NST1 Arabidopsis lyrata scaffold_403649.1 I 0.000
NST2 Arabidopsis lyrata scaffold_503455.1 I 0.000
Si006565m.g Setaria italica Si006565m.g I 0.000
Si007822m.g Setaria italica Si007822m.g I 0.000
Si012319m.g Setaria italica Si012319m.g I 0.000
Si017641m.g Setaria italica Si017641m.g I 0.000
Solyc10g005010.2 Solanum lycopersicum Solyc10g005010.2 I 0.000
Solyc12g017400.1 Solanum lycopersicum Solyc12g017400.1 I 0.000
TCM_000235 Theobroma cacao TCM_000235 I 0.000
TCM_005047 Theobroma cacao TCM_005047 I 0.000
TCM_015621 Theobroma cacao TCM_015621 I 0.000
TCM_016035 Theobroma cacao TCM_016035 I 0.000
TCM_033728 Theobroma cacao TCM_033728 I 0.000
Thhalv10001506m.g Eutrema salsugineum Thhalv10001506m.g I 0.000
Thhalv10008226m.g Eutrema salsugineum Thhalv10008226m.g I 0.000
Thhalv10009336m.g Eutrema salsugineum Thhalv10009336m.g I 0.000
Thhalv10019534m.g Eutrema salsugineum Thhalv10019534m.g I 0.000
Thhalv10029403m.g Eutrema salsugineum Thhalv10029403m.g I 0.000
Traes_4AL_2257954B9 Triticum aestivum Traes_4AL_2257954B9 I 0.000
Traes_4AL_3AFF9664B Triticum aestivum Traes_4AL_3AFF9664B I 0.000
Traes_4AL_8FABAA6C3 Triticum aestivum Traes_4AL_8FABAA6C3 I 0.000
Traes_7AL_46F73E667 Triticum aestivum Traes_7AL_46F73E667 I 0.000
Traes_7AL_B000BC0DD Triticum aestivum Traes_7AL_B000BC0DD I 0.000
Traes_7DL_1AD9A3E8D Triticum aestivum Traes_7DL_1AD9A3E8D I 0.000
Traes_7DL_AD6EAD1A6 Triticum aestivum Traes_7DL_AD6EAD1A6 I 0.000
Traes_7DL_AD6EAD1A61 Triticum aestivum Traes_7DL_AD6EAD1A61 I 0.000
TRIUR3_14210 Triticum urartu TRIUR3_14210 I 0.000
TRIUR3_14543 Triticum urartu TRIUR3_14543 I 0.000
TRIUR3_14544 Triticum urartu TRIUR3_14544 I 0.000
TRIUR3_14545 Triticum urartu TRIUR3_14545 I 0.000
TRIUR3_27911 Triticum urartu TRIUR3_27911 I 0.000
TRIUR3_32451 Triticum urartu TRIUR3_32451 I 0.000
ANAC012 Vitis vinifera VIT_02s0025g02710 I 0.000
ANAC076 Vitis vinifera VIT_04s0023g03110 I 0.000
VIT_15s0048g02660 Vitis vinifera VIT_15s0048g02660 I 0.000
VIT_18s0089g01120 Vitis vinifera VIT_18s0089g01120 I 0.000
SMB Vitis vinifera VIT_19s0085g01210 I 0.000