LPERR09G10900 (Leersia perrieri)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 LPERR09G10900 T322709_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00
Physcomitrella patens
NNGTACGDH

DHCGTACNN
PBM
Weirauch et al.(2014)
pTH8664
0.918 0.760
PK06791.1
M02482_2.00
Cannabis sativa
NNGTACGRN

NYCGTACNN
PBM
Weirauch et al.(2014)
pTH9583
0.913 0.667
SPL1
M00887_2.00
Arabidopsis thaliana
NGTACGGHN

NDCCGTACN
PBM
Franco-Zorrilla et al.(2014)
SPL1
0.905 0.693
SPL1
M07259_2.00
Arabidopsis thaliana
NNNBGTACGGW

WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL1_col_a
0.905 0.693
SPL1
M07260_2.00
Arabidopsis thaliana
NNGTACGKWH

DWMCGTACNN
Dap-seq
OMalley et al.(2016)
SPL1_colamp_a
0.905 0.693
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR09G10900.1 SBP 76 150

Links

Other SBP family TFs
Other Leersia perrieri TFs

202 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28211.m000132 Ricinus communis 28211.m000132 I 0.898
29269.m000250 Ricinus communis 29269.m000250 I 0.960
29889.m003388 Ricinus communis 29889.m003388 I 0.904
30076.m004574 Ricinus communis 30076.m004574 I 0.913
AMTR_s00022p00198330 Amborella trichopoda AMTR_s00022p00198330 I 0.945
AMTR_s00045p00076020 Amborella trichopoda AMTR_s00045p00076020 I 0.902
AMTR_s00106p00142470 Amborella trichopoda AMTR_s00106p00142470 I 0.912
Aquca_009_00161 Aquilegia coerulea Aquca_009_00161 I 0.959
Aquca_029_00063 Aquilegia coerulea Aquca_029_00063 I 0.906
BGIOSGA024253 Oryza indica BGIOSGA024253 I 0.893
BGIOSGA029541 Oryza indica BGIOSGA029541 I 0.966
Bo4g005730 Brassica oleracea Bo4g005730 I 0.904
Bostr.25993s0059 Boechera stricta Bostr.25993s0059 I 0.904
Bostr.29344s0010 Boechera stricta Bostr.29344s0010 I 0.915
Bra041037 Brassica rapa Bra041037 I 0.904
BRADI1G02760 Brachypodium distachyon BRADI1G02760 I 0.904
BRADI3G40030 Brachypodium distachyon BRADI3G40030 I 0.967
BRADI4G33770 Brachypodium distachyon BRADI4G33770 I 0.969
Cagra.16630s0008 Capsella grandiflora Cagra.16630s0008 I 0.904
Cagra.3527s0045 Capsella grandiflora Cagra.3527s0045 I 0.915
Carubv10016658m.g Capsella rubella Carubv10016658m.g I 0.915
cassava17741.valid.m1 Manihot esculenta cassava17741.valid.m1 I 0.894
cassava29736.valid.m1 Manihot esculenta cassava29736.valid.m1 I 0.886
cassava36085.valid.m1 Manihot esculenta cassava36085.valid.m1 I 0.913
cassava37839.valid.m1 Manihot esculenta cassava37839.valid.m1 I 0.894
Ca_03548 Cicer arietinum Ca_03548 I 0.913
Ca_07299 Cicer arietinum Ca_07299 I 0.962
Ca_10879 Cicer arietinum Ca_10879 I 0.887
chr5.CM0158.110.nc Lotus japonicus chr5.CM0158.110.nc I 0.901
Ciclev10004227m.g Citrus clementina Ciclev10004227m.g I 0.901
Ciclev10011938m.g Citrus clementina Ciclev10011938m.g I 0.962
Ciclev10018697m.g Citrus clementina Ciclev10018697m.g I 0.913
Cucsa.242790 Cucumis sativus Cucsa.242790 I 0.961
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I 0.917
estExt_fgenesh1_pg.C_1940033 Physcomitrella patens estExt_fgenesh1_pg.C_1940033 D 0.918
Eucgr.A01019 Eucalyptus grandis Eucgr.A01019 I 0.913
Eucgr.A02441 Eucalyptus grandis Eucgr.A02441 I 0.960
Eucgr.H04114 Eucalyptus grandis Eucgr.H04114 I 0.908
Eucgr.K01828 Eucalyptus grandis Eucgr.K01828 I 0.932
evm.TU.supercontig_146.32 Carica papaya evm.TU.supercontig_146.32 I 0.901
evm.TU.supercontig_149.2 Carica papaya evm.TU.supercontig_149.2 I 0.888
evm.TU.supercontig_80.88 Carica papaya evm.TU.supercontig_80.88 I 0.894
F775_10743 Aegilops tauschii F775_10743 I 0.974
F775_31139 Aegilops tauschii F775_31139 I 0.905
fgenesh1_pg.scaffold_50000083 Physcomitrella patens fgenesh1_pg.scaffold_50000083 I 0.918
gene22660-v1.0-hybrid Fragaria vesca gene22660-v1.0-hybrid I 0.962
gene22889-v1.0-hybrid Fragaria vesca gene22889-v1.0-hybrid I 0.903
GLYMA02G01160 Glycine max GLYMA02G01160 I 0.905
GLYMA02G30670 Glycine max GLYMA02G30670 I 0.944
GLYMA03G29901 Glycine max GLYMA03G29901 I 0.957
GLYMA09G09790 Glycine max GLYMA09G09790 I 0.901
GLYMA10G01211 Glycine max GLYMA10G01211 I 0.905
GLYMA11G16556 Glycine max GLYMA11G16556 I 0.887
GLYMA15G21860 Glycine max GLYMA15G21860 I 0.903
GLYMA18G36960 Glycine max GLYMA18G36960 I 0.931
GLYMA19G32800 Glycine max GLYMA19G32800 I 0.957
Gorai.002G156700 Gossypium raimondii Gorai.002G156700 I 0.958
Gorai.006G066700 Gossypium raimondii Gorai.006G066700 I 0.934
Gorai.007G087900 Gossypium raimondii Gorai.007G087900 I 0.888
Gorai.007G116100 Gossypium raimondii Gorai.007G116100 I 0.890
Gorai.008G135700 Gossypium raimondii Gorai.008G135700 I 0.913
Gorai.013G169800 Gossypium raimondii Gorai.013G169800 I 0.899
GRMZM2G126018 Zea mays GRMZM2G126018 I 0.979
GRMZM2G156756 Zea mays GRMZM2G156756 I 0.917
GRMZM2G160917 Zea mays GRMZM2G160917 I 0.964
GRMZM2G307588 Zea mays GRMZM2G307588 I 0.977
GRMZM2G460544 Zea mays GRMZM2G460544 N 0.905
GSMUA_Achr2G01820_001 Musa acuminata GSMUA_Achr2G01820_001 I 0.912
GSMUA_Achr3G11170_001 Musa acuminata GSMUA_Achr3G11170_001 I 0.962
GSMUA_Achr3G24520_001 Musa acuminata GSMUA_Achr3G24520_001 I 0.914
GSMUA_Achr4G03880_001 Musa acuminata GSMUA_Achr4G03880_001 I 0.886
GSMUA_Achr5G22250_001 Musa acuminata GSMUA_Achr5G22250_001 I 0.902
GSMUA_Achr5G27280_001 Musa acuminata GSMUA_Achr5G27280_001 I 0.899
GSMUA_Achr6G22280_001 Musa acuminata GSMUA_Achr6G22280_001 I 0.967
GSMUA_Achr7G02020_001 Musa acuminata GSMUA_Achr7G02020_001 I 0.956
GSMUA_Achr7G20510_001 Musa acuminata GSMUA_Achr7G20510_001 I 0.965
GSMUA_Achr8G25550_001 Musa acuminata GSMUA_Achr8G25550_001 I 0.966
GSMUA_Achr9G22260_001 Musa acuminata GSMUA_Achr9G22260_001 I 0.934
GSMUA_Achr9G27660_001 Musa acuminata GSMUA_Achr9G27660_001 I 0.966
LPERR03G34030 Leersia perrieri LPERR03G34030 I 0.905
LPERR04G17030 Leersia perrieri LPERR04G17030 I 0.912
LPERR08G16940 Leersia perrieri LPERR08G16940 I 0.955
Lus10004523.g Linum usitatissimum Lus10004523.g I 0.913
Lus10010071.g Linum usitatissimum Lus10010071.g I 0.913
Lus10012020.g Linum usitatissimum Lus10012020.g I 0.931
Lus10016275.g Linum usitatissimum Lus10016275.g I 0.931
Lus10021034.g Linum usitatissimum Lus10021034.g I 0.945
Lus10023818.g Linum usitatissimum Lus10023818.g I 0.945
MDP0000156994 Malus domestica MDP0000156994 I 0.890
MDP0000180408 Malus domestica MDP0000180408 I 0.901
MDP0000180409 Malus domestica MDP0000180409 I 0.898
MDP0000262141 Malus domestica MDP0000262141 I 0.903
MDP0000297978 Malus domestica MDP0000297978 I 0.944
MDP0000861601 Malus domestica MDP0000861601 I 0.890
MDP0000919693 Malus domestica MDP0000919693 I 0.902
MDP0000919694 Malus domestica MDP0000919694 I 0.902
mgf001295m Mimulus guttatus mgf001295m I 0.933
mgf009459m Mimulus guttatus mgf009459m I 0.911
mgf012995m Mimulus guttatus mgf012995m I 0.948
mgf025134m Mimulus guttatus mgf025134m I 0.915
MLOC_4830 Hordeum vulgare MLOC_4830 I 0.905
MTR_1g053715 Medicago truncatula MTR_1g053715 I 0.962
MTR_1g086250 Medicago truncatula MTR_1g086250 I 0.912
MTR_7g092930 Medicago truncatula MTR_7g092930 I 0.957
MTR_7g444860 Medicago truncatula MTR_7g444860 I 0.890
OB03G47050 Oryza brachyantha OB03G47050 I 0.908
OB08G26920 Oryza brachyantha OB08G26920 I 0.966
OB08G27190 Oryza brachyantha OB08G27190 I 0.902
OB09G21350 Oryza brachyantha OB09G21350 N 0.968
OBART03G39900 Oryza barthii OBART03G39900 I 0.908
OBART07G15570 Oryza barthii OBART07G15570 I 0.893
OBART09G14800 Oryza barthii OBART09G14800 I 0.984
OGLUM03G39810 Oryza glumaepatula OGLUM03G39810 I 0.908
OGLUM07G15250 Oryza glumaepatula OGLUM07G15250 I 0.893
OGLUM08G21260 Oryza glumaepatula OGLUM08G21260 I 0.969
OGLUM09G15430 Oryza glumaepatula OGLUM09G15430 I 0.984
OLONG_015903 Oryza longistaminata OLONG_015903 N 0.914
OMERI03G36740 Oryza meridionalis OMERI03G36740 I 0.908
OMERI07G12270 Oryza meridionalis OMERI07G12270 I 0.893
OMERI09G11520 Oryza meridionalis OMERI09G11520 I 0.984
ONIVA03G41820 Oryza nivara ONIVA03G41820 I 0.908
ONIVA07G14170 Oryza nivara ONIVA07G14170 I 0.893
ONIVA08G22610 Oryza nivara ONIVA08G22610 I 0.969
ONIVA09G15400 Oryza nivara ONIVA09G15400 I 0.984
OPUNC03G37130 Oryza punctata OPUNC03G37130 I 0.908
OPUNC03G37170 Oryza punctata OPUNC03G37170 I 0.908
OPUNC08G18140 Oryza punctata OPUNC08G18140 I 0.969
OPUNC09G13250 Oryza punctata OPUNC09G13250 I 0.984
orange1.1g001971m.g Citrus sinensis orange1.1g001971m.g I 0.913
orange1.1g029650m.g Citrus sinensis orange1.1g029650m.g I 0.891
orange1.1g046416m.g Citrus sinensis orange1.1g046416m.g I 0.962
ORGLA03G0367800 Oryza glaberrima ORGLA03G0367800 I 0.908
ORGLA08G0176500 Oryza glaberrima ORGLA08G0176500 I 0.969
ORGLA09G0114000 Oryza glaberrima ORGLA09G0114000 I 0.984
ORUFI03G41710 Oryza rufipogon ORUFI03G41710 I 0.908
ORUFI07G16070 Oryza rufipogon ORUFI07G16070 I 0.893
ORUFI08G22440 Oryza rufipogon ORUFI08G22440 I 0.969
ORUFI09G15960 Oryza rufipogon ORUFI09G15960 I 0.984
OS09G0491532 Oryza sativa OS09G0491532 I 0.966
Pavir.Ba01711 Panicum virgatum Pavir.Ba01711 I 0.971
Pavir.Fb01946 Panicum virgatum Pavir.Fb01946 I 0.963
Pavir.Ia00235 Panicum virgatum Pavir.Ia00235 I 0.917
Pavir.J01500 Panicum virgatum Pavir.J01500 I 0.917
Pavir.J11258 Panicum virgatum Pavir.J11258 I 0.971
PGSC0003DMG400005196 Solanum tuberosum PGSC0003DMG400005196 I 0.913
PGSC0003DMG400011433 Solanum tuberosum PGSC0003DMG400011433 I 0.909
PK06791.1 Cannabis sativa PK06791.1 D 0.913
PK11310.1 Cannabis sativa PK11310.1 I 0.932
PK18312.1 Cannabis sativa PK18312.1 I 0.962
Pm002693 Prunus mume Pm002693 I 0.944
Pm007035 Prunus mume Pm007035 I 0.939
Pm008474 Prunus mume Pm008474 I 0.898
Pm008475 Prunus mume Pm008475 I 0.898
Pm017778 Prunus mume Pm017778 I 0.911
POPTR_0001s40870 Populus trichocarpa POPTR_0001s40870 I 0.903
POPTR_0002s18970 Populus trichocarpa POPTR_0002s18970 I 0.919
POPTR_0011s11770 Populus trichocarpa POPTR_0011s11770 I 0.903
POPTR_0014s10960 Populus trichocarpa POPTR_0014s10960 I 0.919
PRUPE_ppa000690mg Prunus persica PRUPE_ppa000690mg I 0.898
PRUPE_ppa000792mg Prunus persica PRUPE_ppa000792mg I 0.901
PRUPE_ppa007056mg Prunus persica PRUPE_ppa007056mg I 0.944
PRUPE_ppa021582mg Prunus persica PRUPE_ppa021582mg I 0.944
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I 0.911
PRUPE_ppa024285mg Prunus persica PRUPE_ppa024285mg I 0.911
SapurV1A.0014s0380 Salix purpurea SapurV1A.0014s0380 I 0.919
SapurV1A.0018s0470 Salix purpurea SapurV1A.0018s0470 I 0.952
SapurV1A.0156s0200 Salix purpurea SapurV1A.0156s0200 I 0.903
SapurV1A.0294s0270 Salix purpurea SapurV1A.0294s0270 I 0.919
SapurV1A.1264s0060 Salix purpurea SapurV1A.1264s0060 I 0.902
Sb01g002530 Sorghum bicolor Sb01g002530 I 0.917
Sb02g028420 Sorghum bicolor Sb02g028420 I 0.981
Sb07g027740 Sorghum bicolor Sb07g027740 I 0.979
SELMODRAFT_437670 Selaginella moellendorffii SELMODRAFT_437670 I 0.902
SELMODRAFT_445524 Selaginella moellendorffii SELMODRAFT_445524 I 0.902
Si013870m.g Setaria italica Si013870m.g I 0.963
Si030195m.g Setaria italica Si030195m.g I 0.971
Si034095m.g Setaria italica Si034095m.g I 0.917
Solyc01g068100.2 Solanum lycopersicum Solyc01g068100.2 I 0.913
Solyc10g078700.1 Solanum lycopersicum Solyc10g078700.1 I 0.909
SPL1 Arabidopsis thaliana AT2G47070 D 0.905
SPL1 Arabidopsis lyrata fgenesh2_kg.4__2943__AT2G47070.1 I 0.901
SPL12 Arabidopsis lyrata scaffold_503227.1 I 0.920
SPL14 Oryza sativa OS08G0509600 I 0.969
SPL6 Oryza sativa OS03G0833300 I 0.908
TCM_004922 Theobroma cacao TCM_004922 I 0.913
TCM_005620 Theobroma cacao TCM_005620 I 0.887
TCM_021482 Theobroma cacao TCM_021482 I 0.901
TCM_024873 Theobroma cacao TCM_024873 I 0.960
TCM_031595 Theobroma cacao TCM_031595 I 0.899
Thhalv10001295m.g Eutrema salsugineum Thhalv10001295m.g I 0.904
Traes_4AL_5062917C4 Triticum aestivum Traes_4AL_5062917C4 I 0.905
Traes_5BL_3503725F1 Triticum aestivum Traes_5BL_3503725F1 I 0.902
Traes_5BL_96D5EA4EE Triticum aestivum Traes_5BL_96D5EA4EE I 0.946
Traes_5DL_3CDCC5DFF Triticum aestivum Traes_5DL_3CDCC5DFF I 0.905
Traes_7DS_E2A582546 Triticum aestivum Traes_7DS_E2A582546 N 0.910
TRIUR3_23872 Triticum urartu TRIUR3_23872 I 0.980
TRIUR3_33729 Triticum urartu TRIUR3_33729 I 0.905
VIT_05s0020g00700 Vitis vinifera VIT_05s0020g00700 I 0.901
VIT_07s0005g02260 Vitis vinifera VIT_07s0005g02260 I 0.913
VIT_08s0007g06270 Vitis vinifera VIT_08s0007g06270 I 0.960
VIT_15s0021g02290 Vitis vinifera VIT_15s0021g02290 I 0.887
VIT_18s0122g00380 Vitis vinifera VIT_18s0122g00380 I 0.905