MLOC_51510 (Hordeum vulgare)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 MLOC_51510 T322720_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL8
M02714_2.00
Arabidopsis thaliana
DWWDDDGTACRNWNHW

WDNWNYGTACHHHWWH
SELEX
Mathelier et al.(2014)
MA0578.1
0.902 0.773
fgenesh1_pg.scaffold_252000020
M02481_2.00
Physcomitrella patens
NNNKRCVNN

NNBGYMNNN
PBM
Weirauch et al.(2014)
pTH8491
0.896 0.773
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_51510.1 SBP 202 276

Links

Other SBP family TFs
Other Hordeum vulgare TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Al_scaffold_0007_76 Arabidopsis lyrata Al_scaffold_0007_76 I 0.000
Aquca_006_00159 Aquilegia coerulea Aquca_006_00159 I 0.000
Aquca_058_00063 Aquilegia coerulea Aquca_058_00063 I 0.000
AT1G06070 Arabidopsis thaliana AT1G06070 D 0.000
AT4G38900 Arabidopsis thaliana AT4G38900 I 0.000
BGIOSGA029105 Oryza indica BGIOSGA029105 I 0.000
BGIOSGA029106 Oryza indica BGIOSGA029106 I 0.000
Bo3g149620 Brassica oleracea Bo3g149620 I 0.000
Bo5g007170 Brassica oleracea Bo5g007170 I 0.000
Bo7g119550 Brassica oleracea Bo7g119550 I 0.000
Bo8g005940 Brassica oleracea Bo8g005940 I 0.000
Bostr.25219s0353 Boechera stricta Bostr.25219s0353 I 0.000
Bostr.25542s0069 Boechera stricta Bostr.25542s0069 I 0.000
Bra010722 Brassica rapa Bra010722 I 0.000
Bra015471 Brassica rapa Bra015471 I 0.000
Bra030637 Brassica rapa Bra030637 I 0.000
Bra033582 Brassica rapa Bra033582 I 0.000
BRADI1G76690 Brachypodium distachyon BRADI1G76690 N 0.000
BRADI3G41980 Brachypodium distachyon BRADI3G41980 I 0.000
BRADI5G14497 Brachypodium distachyon BRADI5G14497 I 0.000
Cagra.1383s0070 Capsella grandiflora Cagra.1383s0070 N 0.000
Cagra.1671s0236 Capsella grandiflora Cagra.1671s0236 I 0.000
Carubv10004500m.g Capsella rubella Carubv10004500m.g N 0.000
Carubv10008993m.g Capsella rubella Carubv10008993m.g I 0.000
cassava30160.valid.m1 Manihot esculenta cassava30160.valid.m1 I 0.000
cassava32399.m1 Manihot esculenta cassava32399.m1 I 0.000
cassava38273.valid.m1 Manihot esculenta cassava38273.valid.m1 I 0.000
cassava43164.valid.m1 Manihot esculenta cassava43164.valid.m1 I 0.000
Ca_02692 Cicer arietinum Ca_02692 I 0.000
Ca_27693 Cicer arietinum Ca_27693 I 0.000
chr3.CM0106.340.nd Lotus japonicus chr3.CM0106.340.nd I 0.000
Ciclev10028062m.g Citrus clementina Ciclev10028062m.g I 0.000
Cla016124 Citrullus lanatus Cla016124 I 0.000
Cla016125 Citrullus lanatus Cla016125 I 0.000
Cla022201 Citrullus lanatus Cla022201 I 0.000
Cla022204 Citrullus lanatus Cla022204 I 0.000
Cucsa.062530 Cucumis sativus Cucsa.062530 I 0.000
Cucsa.251880 Cucumis sativus Cucsa.251880 I 0.000
Cucsa.382180 Cucumis sativus Cucsa.382180 I 0.000
Cucsa.382190 Cucumis sativus Cucsa.382190 I 0.000
estExt_gwp_gw1.C_200078 Physcomitrella patens estExt_gwp_gw1.C_200078 I 0.000
estExt_gwp_gw1.C_5120003 Physcomitrella patens estExt_gwp_gw1.C_5120003 I 0.000
Eucgr.D00737 Eucalyptus grandis Eucgr.D00737 I 0.000
Eucgr.I01335 Eucalyptus grandis Eucgr.I01335 I 0.000
evm.TU.supercontig_150.7 Carica papaya evm.TU.supercontig_150.7 I 0.000
evm.TU.supercontig_81.160 Carica papaya evm.TU.supercontig_81.160 I 0.000
e_gw1.20.99.1 Physcomitrella patens e_gw1.20.99.1 I 0.000
F775_13434 Aegilops tauschii F775_13434 I 0.000
F775_32059 Aegilops tauschii F775_32059 I 0.000
gene01680-v1.0-hybrid Fragaria vesca gene01680-v1.0-hybrid I 0.000
gene23487-v1.0-hybrid Fragaria vesca gene23487-v1.0-hybrid I 0.000
GLYMA04G02850 Glycine max GLYMA04G02850 I 0.000
GLYMA11G11791 Glycine max GLYMA11G11791 I 0.000
GLYMA11G13510 Glycine max GLYMA11G13510 I 0.000
GLYMA12G04050 Glycine max GLYMA12G04050 I 0.000
GLYMA12G05520 Glycine max GLYMA12G05520 I 0.000
GLYMA13G42030 Glycine max GLYMA13G42030 I 0.000
GLYMA15G03350 Glycine max GLYMA15G03350 I 0.000
Gorai.001G243800 Gossypium raimondii Gorai.001G243800 I 0.000
Gorai.005G015900 Gossypium raimondii Gorai.005G015900 I 0.000
Gorai.005G248900 Gossypium raimondii Gorai.005G248900 I 0.000
Gorai.006G229500 Gossypium raimondii Gorai.006G229500 I 0.000
Gorai.011G140400 Gossypium raimondii Gorai.011G140400 I 0.000
GRMZM2G428184 Zea mays GRMZM2G428184 N 0.000
GSMUA_Achr11G14990_001 Musa acuminata GSMUA_Achr11G14990_001 I 0.000
GSMUA_Achr3G12290_001 Musa acuminata GSMUA_Achr3G12290_001 I 0.000
GSMUA_Achr5G25700_001 Musa acuminata GSMUA_Achr5G25700_001 I 0.000
GSMUA_Achr8G12090_001 Musa acuminata GSMUA_Achr8G12090_001 I 0.000
GSMUA_AchrUn_randomG00680_001 Musa acuminata GSMUA_AchrUn_randomG00680_001 I 0.000
gw1.20.225.1 Physcomitrella patens gw1.20.225.1 I 0.000
Lus10008150.g Linum usitatissimum Lus10008150.g I 0.000
Lus10018061.g Linum usitatissimum Lus10018061.g I 0.000
Lus10019376.g Linum usitatissimum Lus10019376.g I 0.000
Lus10042057.g Linum usitatissimum Lus10042057.g I 0.000
MDP0000234166 Malus domestica MDP0000234166 I 0.000
MDP0000435971 Malus domestica MDP0000435971 I 0.000
mgf000302m Mimulus guttatus mgf000302m I 0.000
mgf004912m Mimulus guttatus mgf004912m I 0.000
MLOC_10725 Hordeum vulgare MLOC_10725 N 0.000
MLOC_64362 Hordeum vulgare MLOC_64362 I 0.000
MLOC_64781 Hordeum vulgare MLOC_64781 I 0.000
MLOC_75510 Hordeum vulgare MLOC_75510 I 0.000
MTR_1g023690 Medicago truncatula MTR_1g023690 N 0.000
MTR_4g072090 Medicago truncatula MTR_4g072090 I 0.000
OGLUM09G17020 Oryza glumaepatula OGLUM09G17020 I 0.000
OMERI09G12160 Oryza meridionalis OMERI09G12160 I 0.000
orange1.1g007579m.g Citrus sinensis orange1.1g007579m.g I 0.000
Pavir.J19159 Panicum virgatum Pavir.J19159 N 0.000
Pavir.J29906 Panicum virgatum Pavir.J29906 N 0.000
PDK_20s1312701g003 Phoenix dactylifera PDK_20s1312701g003 I 0.000
PGSC0003DMG400001659 Solanum tuberosum PGSC0003DMG400001659 I 0.000
PK00843.1 Cannabis sativa PK00843.1 I 0.000
PK20942.1 Cannabis sativa PK20942.1 D 0.000
Pm007522 Prunus mume Pm007522 I 0.000
POPTR_0004s17080 Populus trichocarpa POPTR_0004s17080 I 0.000
POPTR_0009s12830 Populus trichocarpa POPTR_0009s12830 I 0.000
POPTR_0017s05610 Populus trichocarpa POPTR_0017s05610 I 0.000
RF2A Oryza sativa OS09G0516200 I 0.000
SapurV1A.0091s0130 Salix purpurea SapurV1A.0091s0130 I 0.000
SapurV1A.0379s0290 Salix purpurea SapurV1A.0379s0290 I 0.000
Sb01g048710 Sorghum bicolor Sb01g048710 N 0.000
Sb06g021350 Sorghum bicolor Sb06g021350 I 0.000
Sb07g025490 Sorghum bicolor Sb07g025490 I 0.000
scaffold_100594.1 Arabidopsis lyrata scaffold_100594.1 I 0.000
SELMODRAFT_129846 Selaginella moellendorffii SELMODRAFT_129846 I 0.000
SELMODRAFT_34663 Selaginella moellendorffii SELMODRAFT_34663 I 0.000
SELMODRAFT_77868 Selaginella moellendorffii SELMODRAFT_77868 I 0.000
Si015587m.g Setaria italica Si015587m.g I 0.000
Si035841m.g Setaria italica Si035841m.g N 0.000
Solyc01g110480.2 Solanum lycopersicum Solyc01g110480.2 I 0.000
Solyc06g053350.2 Solanum lycopersicum Solyc06g053350.2 I 0.000
TCM_006766 Theobroma cacao TCM_006766 I 0.000
TCM_019998 Theobroma cacao TCM_019998 I 0.000
Thhalv10007692m.g Eutrema salsugineum Thhalv10007692m.g I 0.000
Thhalv10024895m.g Eutrema salsugineum Thhalv10024895m.g I 0.000
Traes_2AL_FA1957F59 Triticum aestivum Traes_2AL_FA1957F59 I 0.000
Traes_7BS_7B68879A9 Triticum aestivum Traes_7BS_7B68879A9 I 0.000
Traes_7DS_3463CAE33 Triticum aestivum Traes_7DS_3463CAE33 I 0.000
Traes_7DS_47B5A7FFF Triticum aestivum Traes_7DS_47B5A7FFF I 0.000
TRIUR3_16287 Triticum urartu TRIUR3_16287 I 0.000
TRIUR3_23538 Triticum urartu TRIUR3_23538 N 0.000
TRIUR3_31242 Triticum urartu TRIUR3_31242 I 0.000
VIT_03s0038g00860 Vitis vinifera VIT_03s0038g00860 I 0.000
VIT_05s0102g01120 Vitis vinifera VIT_05s0102g01120 I 0.000