OB02G15090 (Oryza brachyantha)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 OB02G15090 T322757_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL8
M02714_2.00
Arabidopsis thaliana
DWWDDDGTACRNWNHW

WDNWNYGTACHHHWWH
SELEX
Mathelier et al.(2014)
MA0578.1
0.920 0.773
fgenesh1_pg.scaffold_252000020
M02481_2.00
Physcomitrella patens
NNNKRCVNN

NNBGYMNNN
PBM
Weirauch et al.(2014)
pTH8491
0.909 0.787
fgenesh1_pg.scaffold_194000034
M02480_2.00
Physcomitrella patens
NNNGTACNNN

NNNGTACNNN
PBM
Weirauch et al.(2014)
pTH8580
0.899 0.773
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB02G15090.1 SBP 22 96

Links

Other SBP family TFs
Other Oryza brachyantha TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29983.m003158 Ricinus communis 29983.m003158 I 0.920
30174.m008803 Ricinus communis 30174.m008803 I 0.915
AMTR_s00019p00235390 Amborella trichopoda AMTR_s00019p00235390 I 0.929
Aquca_024_00116 Aquilegia coerulea Aquca_024_00116 I 0.944
Aquca_033_00055 Aquilegia coerulea Aquca_033_00055 I 0.888
BGIOSGA007655 Oryza indica BGIOSGA007655 I 0.976
BGIOSGA017275 Oryza indica BGIOSGA017275 I 0.933
Bo5g001290 Brassica oleracea Bo5g001290 I 0.920
Bo8g118210 Brassica oleracea Bo8g118210 I 0.920
Bostr.5325s0127 Boechera stricta Bostr.5325s0127 I 0.920
Bra032662 Brassica rapa Bra032662 I 0.920
Bra033221 Brassica rapa Bra033221 I 0.920
BRADI1G31390 Brachypodium distachyon BRADI1G31390 I 0.975
BRADI3G05720 Brachypodium distachyon BRADI3G05720 I 0.983
BRADI5G24670 Brachypodium distachyon BRADI5G24670 I 0.933
Cagra.1968s0141 Capsella grandiflora Cagra.1968s0141 I 0.920
Carubv10009506m.g Capsella rubella Carubv10009506m.g I 0.920
cassava19899.m1 Manihot esculenta cassava19899.m1 I 0.915
Ca_16243 Cicer arietinum Ca_16243 I 0.899
Ca_18942 Cicer arietinum Ca_18942 I 0.915
chr3.CM0160.520.nc Lotus japonicus chr3.CM0160.520.nc I 0.889
chr3.CM0282.980.nc Lotus japonicus chr3.CM0282.980.nc I 0.899
Ciclev10021106m.g Citrus clementina Ciclev10021106m.g I 0.915
Cla006776 Citrullus lanatus Cla006776 I 0.911
Cla020006 Citrullus lanatus Cla020006 I 0.919
Cucsa.126820 Cucumis sativus Cucsa.126820 I 0.912
Cucsa.196000 Cucumis sativus Cucsa.196000 I 0.888
Eucgr.E01600 Eucalyptus grandis Eucgr.E01600 I 0.915
evm.TU.supercontig_149.10 Carica papaya evm.TU.supercontig_149.10 I 0.915
F775_00761 Aegilops tauschii F775_00761 I 0.951
F775_20508 Aegilops tauschii F775_20508 N 0.910
fgenesh1_pg.scaffold_118000004 Physcomitrella patens fgenesh1_pg.scaffold_118000004 I 0.924
fgenesh1_pg.scaffold_194000034 Physcomitrella patens fgenesh1_pg.scaffold_194000034 D 0.899
fgenesh1_pg.scaffold_252000020 Physcomitrella patens fgenesh1_pg.scaffold_252000020 D 0.909
fgenesh1_pg.scaffold_337000032 Physcomitrella patens fgenesh1_pg.scaffold_337000032 I 0.913
fgenesh1_pg.scaffold_50000085 Physcomitrella patens fgenesh1_pg.scaffold_50000085 I 0.934
gene04786-v1.0-hybrid Fragaria vesca gene04786-v1.0-hybrid I 0.914
gene29726-v1.0-hybrid Fragaria vesca gene29726-v1.0-hybrid I 0.904
GLYMA01G15258 Glycine max GLYMA01G15258 I 0.941
GLYMA03G27180 Glycine max GLYMA03G27180 I 0.915
GLYMA06G36140 Glycine max GLYMA06G36140 I 0.899
GLYMA07G14610 Glycine max GLYMA07G14610 I 0.915
GLYMA12G27330 Glycine max GLYMA12G27330 I 0.899
Gorai.001G176000 Gossypium raimondii Gorai.001G176000 I 0.915
Gorai.008G107400 Gossypium raimondii Gorai.008G107400 I 0.915
GRMZM2G036297 Zea mays GRMZM2G036297 I 0.933
GRMZM2G058588 Zea mays GRMZM2G058588 I 0.935
GRMZM2G101499 Zea mays GRMZM2G101499 I 0.980
GRMZM2G111136 Zea mays GRMZM2G111136 I 0.983
GRMZM2G168229 Zea mays GRMZM2G168229 I 0.974
GSMUA_Achr10G06210_001 Musa acuminata GSMUA_Achr10G06210_001 I 0.944
GSMUA_Achr2G11940_001 Musa acuminata GSMUA_Achr2G11940_001 I 0.917
GSMUA_Achr3G00810_001 Musa acuminata GSMUA_Achr3G00810_001 I 0.951
GSMUA_Achr4G20590_001 Musa acuminata GSMUA_Achr4G20590_001 I 0.955
GSMUA_Achr4G24610_001 Musa acuminata GSMUA_Achr4G24610_001 I 0.907
GSMUA_Achr4G28960_001 Musa acuminata GSMUA_Achr4G28960_001 I 0.925
GSMUA_Achr7G05010_001 Musa acuminata GSMUA_Achr7G05010_001 I 0.913
GSMUA_Achr7G08750_001 Musa acuminata GSMUA_Achr7G08750_001 I 0.967
LPERR02G05080 Leersia perrieri LPERR02G05080 I 0.986
LPERR04G23580 Leersia perrieri LPERR04G23580 I 0.933
LPERR06G19480 Leersia perrieri LPERR06G19480 I 0.981
Lus10028181.g Linum usitatissimum Lus10028181.g I 0.906
Lus10042882.g Linum usitatissimum Lus10042882.g I 0.904
MDP0000156994 Malus domestica MDP0000156994 I 0.889
MDP0000158607 Malus domestica MDP0000158607 I 0.895
MDP0000803116 Malus domestica MDP0000803116 I 0.912
MDP0000861601 Malus domestica MDP0000861601 I 0.889
mgf016085m Mimulus guttatus mgf016085m I 0.918
MLOC_326 Hordeum vulgare MLOC_326 I 0.981
MLOC_51510 Hordeum vulgare MLOC_51510 I 0.981
MLOC_57503 Hordeum vulgare MLOC_57503 I 0.933
MLOC_6525 Hordeum vulgare MLOC_6525 I 0.960
MTR_8g005960 Medicago truncatula MTR_8g005960 I 0.918
MTR_8g463140 Medicago truncatula MTR_8g463140 I 0.899
OB04G34990 Oryza brachyantha OB04G34990 I 0.933
OB06G31100 Oryza brachyantha OB06G31100 I 0.981
OBART04G27990 Oryza barthii OBART04G27990 I 0.933
OBART06G23500 Oryza barthii OBART06G23500 I 0.971
OGLUM04G27880 Oryza glumaepatula OGLUM04G27880 I 0.933
OGLUM06G24700 Oryza glumaepatula OGLUM06G24700 I 0.981
OLONG_021174 Oryza longistaminata OLONG_021174 I 0.933
OMERI02G06720 Oryza meridionalis OMERI02G06720 I 0.976
OMERI04G23390 Oryza meridionalis OMERI04G23390 I 0.933
OMERI06G23430 Oryza meridionalis OMERI06G23430 I 0.981
ONIVA01G24470 Oryza nivara ONIVA01G24470 I 0.981
ONIVA04G26660 Oryza nivara ONIVA04G26660 I 0.933
OPUNC02G05050 Oryza punctata OPUNC02G05050 I 0.984
OPUNC04G25460 Oryza punctata OPUNC04G25460 I 0.933
OPUNC06G21190 Oryza punctata OPUNC06G21190 I 0.981
orange1.1g020302m.g Citrus sinensis orange1.1g020302m.g I 0.915
ORGLA02G0053800 Oryza glaberrima ORGLA02G0053800 I 0.976
ORGLA04G0242500 Oryza glaberrima ORGLA04G0242500 I 0.933
ORGLA06G0196600 Oryza glaberrima ORGLA06G0196600 I 0.981
ORUFI04G29620 Oryza rufipogon ORUFI04G29620 I 0.933
ORUFI06G25170 Oryza rufipogon ORUFI06G25170 I 0.981
Pavir.Ab00520 Panicum virgatum Pavir.Ab00520 I 0.974
Pavir.Da00293 Panicum virgatum Pavir.Da00293 I 0.981
Pavir.Db00525 Panicum virgatum Pavir.Db00525 I 0.981
Pavir.Ga00066 Panicum virgatum Pavir.Ga00066 I 0.933
Pavir.Gb00284 Panicum virgatum Pavir.Gb00284 I 0.933
PGSC0003DMG400026027 Solanum tuberosum PGSC0003DMG400026027 I 0.914
PGSC0003DMG400029162 Solanum tuberosum PGSC0003DMG400029162 I 0.914
PGSC0003DMG400032817 Solanum tuberosum PGSC0003DMG400032817 I 0.922
PK25779.1 Cannabis sativa PK25779.1 I 0.915
Pm011381 Prunus mume Pm011381 I 0.887
POPTR_0002s14320 Populus trichocarpa POPTR_0002s14320 I 0.915
POPTR_0014s05680 Populus trichocarpa POPTR_0014s05680 I 0.915
PRUPE_ppa022739mg Prunus persica PRUPE_ppa022739mg I 0.887
SapurV1A.0033s0300 Salix purpurea SapurV1A.0033s0300 I 0.900
SapurV1A.0382s0100 Salix purpurea SapurV1A.0382s0100 I 0.915
Sb04g005180 Sorghum bicolor Sb04g005180 I 0.983
Sb06g031290 Sorghum bicolor Sb06g031290 I 0.933
Sb10g026200 Sorghum bicolor Sb10g026200 I 0.981
SELMODRAFT_17706 Selaginella moellendorffii SELMODRAFT_17706 I 0.886
SELMODRAFT_17777 Selaginella moellendorffii SELMODRAFT_17777 I 0.934
SELMODRAFT_28629 Selaginella moellendorffii SELMODRAFT_28629 I 0.928
SELMODRAFT_28630 Selaginella moellendorffii SELMODRAFT_28630 I 0.886
SELMODRAFT_49502 Selaginella moellendorffii SELMODRAFT_49502 I 0.904
SELMODRAFT_59543 Selaginella moellendorffii SELMODRAFT_59543 I 0.904
SELMODRAFT_59884 Selaginella moellendorffii SELMODRAFT_59884 I 0.928
SELMODRAFT_7674 Selaginella moellendorffii SELMODRAFT_7674 I 0.932
Si006559m.g Setaria italica Si006559m.g I 0.981
Si017338m.g Setaria italica Si017338m.g I 0.974
Si022315m.g Setaria italica Si022315m.g I 0.933
Solyc01g090730.2 Solanum lycopersicum Solyc01g090730.2 I 0.914
Solyc07g053810.2 Solanum lycopersicum Solyc07g053810.2 I 0.907
Solyc10g018780.1 Solanum lycopersicum Solyc10g018780.1 I 0.914
SPL10 Oryza indica BGIOSGA023408 I 0.981
SPL10 Oryza sativa OS06G0659100 I 0.981
SPL5 Oryza sativa OS02G0177300 I 0.976
SPL8 Arabidopsis thaliana AT1G02065 D 0.920
SPL8 Arabidopsis lyrata fgenesh2_kg.1__23__AT1G02065.1 I 0.920
SPL8 Vitis vinifera VIT_15s0021g02300 I 0.900
SPL8 Oryza sativa OS04G0656500 I 0.933
TCM_005622 Theobroma cacao TCM_005622 I 0.915
Thhalv10008083m.g Eutrema salsugineum Thhalv10008083m.g I 0.920
Traes_7DL_1957A97EC Triticum aestivum Traes_7DL_1957A97EC N 0.968
Traes_7DL_2D8356B05 Triticum aestivum Traes_7DL_2D8356B05 N 0.910
Traes_7DL_ED348696E Triticum aestivum Traes_7DL_ED348696E I 0.981
TRIUR3_10193 Triticum urartu TRIUR3_10193 I 0.965
TRIUR3_34351 Triticum urartu TRIUR3_34351 I 0.933
TRIUR3_34424 Triticum urartu TRIUR3_34424 N 0.953
VIT_12s0028g03350 Vitis vinifera VIT_12s0028g03350 I 0.891