CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si031154m.g
(
Setaria italica
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03110 (SBP)
IPR004333
Si031154m.g
T323054_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK22320.1
M02483_2.00
Cannabis sativa
NNGTACGGNN
NNCCGTACNN
PBM
Weirauch et al.(2014)
pTH9723
0.897
0.827
For this family, TFs with SR scores >
0.885
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si031154m
SBP
83
157
CQAERCNADLSDAATYNRRHKVCQTHSKAPVVLVAGLRQRFCQQCSRFHELSEFDETRRSCRLRLAGHNERRRKS
Links
Other
SBP
family TFs
Other
Setaria italica
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy