Cucsa.046310 (Cucumis sativus)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Cucsa.046310 T323255_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.046310.1 SBP 56 130

Links

Other SBP family TFs
Other Cucumis sativus TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
chr6.CM0114.270.nc Lotus japonicus chr6.CM0114.270.nc I 0.894
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I 0.887
fgenesh1_pg.scaffold_337000032 Physcomitrella patens fgenesh1_pg.scaffold_337000032 I 0.887
Cucsa.196000 Cucumis sativus Cucsa.196000 I 0.912
Cucsa.126820 Cucumis sativus Cucsa.126820 I 0.911
cassava46941.m1 Manihot esculenta cassava46941.m1 I 0.952
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I 0.888
cassava17741.valid.m1 Manihot esculenta cassava17741.valid.m1 I 0.892
29983.m003158 Ricinus communis 29983.m003158 I 0.896
Pm014154 Prunus mume Pm014154 I 0.908
Pm011381 Prunus mume Pm011381 I 0.914
Pm010075 Prunus mume Pm010075 I 0.895
Cla023735 Citrullus lanatus Cla023735 I 0.906
Cla020006 Citrullus lanatus Cla020006 I 0.914
Cla009788 Citrullus lanatus Cla009788 I 0.957
Ca_16243 Cicer arietinum Ca_16243 I 0.921
TRIUR3_23102 Triticum urartu TRIUR3_23102 I 0.900
Traes_2BS_186EA570A Triticum aestivum Traes_2BS_186EA570A I 0.900
Bostr.23794s0714 Boechera stricta Bostr.23794s0714 I 0.894
Ciclev10017104m.g Citrus clementina Ciclev10017104m.g I 0.923
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.894
chr3.CM0282.980.nc Lotus japonicus chr3.CM0282.980.nc I 0.921
chr3.CM0160.520.nc Lotus japonicus chr3.CM0160.520.nc I 0.940
PK26639.1 Cannabis sativa PK26639.1 I 0.937
PK17790.1 Cannabis sativa PK17790.1 I 0.888
SapurV1A.0012s0510 Salix purpurea SapurV1A.0012s0510 I 0.942
orange1.1g032310m.g Citrus sinensis orange1.1g032310m.g I 0.923
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.894
MDP0000861601 Malus domestica MDP0000861601 I 0.914
MDP0000158607 Malus domestica MDP0000158607 I 0.924
MDP0000156994 Malus domestica MDP0000156994 I 0.914
Lus10039846.g Linum usitatissimum Lus10039846.g I 0.907
Lus10018610.g Linum usitatissimum Lus10018610.g I 0.907
Lus10015421.g Linum usitatissimum Lus10015421.g I 0.900
Lus10013999.g Linum usitatissimum Lus10013999.g I 0.900
gene29726-v1.0-hybrid Fragaria vesca gene29726-v1.0-hybrid I 0.927
evm.TU.supercontig_27.40 Carica papaya evm.TU.supercontig_27.40 I 0.902
Eucgr.E03260 Eucalyptus grandis Eucgr.E03260 I 0.901
Solyc10g009080.2 Solanum lycopersicum Solyc10g009080.2 I 0.942
Solyc02g077920.2 Solanum lycopersicum Solyc02g077920.2 I 0.900
Si031154m.g Setaria italica Si031154m.g I 0.892
MTR_7g444860 Medicago truncatula MTR_7g444860 I 0.886
MTR_4g088555 Medicago truncatula MTR_4g088555 I 0.912
MLOC_13032 Hordeum vulgare MLOC_13032 I 0.900
LPERR04G17030 Leersia perrieri LPERR04G17030 I 0.900
GSMUA_Achr1G08440_001 Musa acuminata GSMUA_Achr1G08440_001 I 0.892
GLYMA15G08270 Glycine max GLYMA15G08270 I 0.929
GLYMA13G31090 Glycine max GLYMA13G31090 I 0.937
GLYMA12G27330 Glycine max GLYMA12G27330 I 0.921
GLYMA06G36140 Glycine max GLYMA06G36140 I 0.921
BRADI1G26720 Brachypodium distachyon BRADI1G26720 I 0.893
Bra021880 Brassica rapa Bra021880 I 0.886
Bra021094 Brassica rapa Bra021094 I 0.900
Bo9g137270 Brassica oleracea Bo9g137270 I 0.900
Bo1g129690 Brassica oleracea Bo1g129690 I 0.900
BGIOSGA016888 Oryza indica BGIOSGA016888 I 0.888
MTR_8g463140 Medicago truncatula MTR_8g463140 I 0.921
OB04G27960 Oryza brachyantha OB04G27960 I 0.890
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I 0.887
SPL7 Oryza sativa OS04G0551500 I 0.888
PGSC0003DMG400022824 Solanum tuberosum PGSC0003DMG400022824 I 0.930
PGSC0003DMG400032817 Solanum tuberosum PGSC0003DMG400032817 I 0.893
POPTR_0004s04630 Populus trichocarpa POPTR_0004s04630 I 0.941
PRUPE_ppa011968mg Prunus persica PRUPE_ppa011968mg I 0.908
PRUPE_ppa012607mg Prunus persica PRUPE_ppa012607mg I 0.895
PRUPE_ppa022739mg Prunus persica PRUPE_ppa022739mg I 0.914
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I 0.888
ONIVA04G19190 Oryza nivara ONIVA04G19190 I 0.888
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I 0.888
OBART04G20940 Oryza barthii OBART04G20940 I 0.888
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I 0.888
OPUNC04G18620 Oryza punctata OPUNC04G18620 I 0.888
OMERI04G17360 Oryza meridionalis OMERI04G17360 I 0.888
Sb02g034180 Sorghum bicolor Sb02g034180 N 0.939
GLYMA13G37130 Glycine max GLYMA13G37130 N 0.890
GRMZM2G113779 Zea mays GRMZM2G113779 N 0.915
GLYMA07G31880 Glycine max GLYMA07G31880 N 0.912
GRMZM2G067624 Zea mays GRMZM2G067624 N 0.894
GLYMA13G24590 Glycine max GLYMA13G24590 N 0.913