CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0382s0120
(
Salix purpurea
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03110 (SBP)
IPR004333
SapurV1A.0382s0120
T323669_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00
Physcomitrella patens
NNGTACGDH
DHCGTACNN
PBM
Weirauch et al.(2014)
pTH8664
0.908
0.747
PK06791.1
M02482_2.00
Cannabis sativa
NNGTACGRN
NYCGTACNN
PBM
Weirauch et al.(2014)
pTH9583
0.897
0.720
SPL12
M02475_2.00
Arabidopsis thaliana
NGTACGDN
NHCGTACN
PBM
Weirauch et al.(2014)
pTH7500
0.895
0.693
SPL4
M02472_2.00
Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN
PBM
Weirauch et al.(2014)
pTH7408
0.886
0.720
For this family, TFs with SR scores >
0.885
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0382s0120.1.p
SBP
173
247
CQVVGCNVALLNAKDYHRRHKVCELHSKAPKVIVLGLEQRFCQQCSRFHLVSEFDNAKRSCRRRLAGHNERRRKS
SapurV1A.0382s0120.2.p
SBP
173
247
CQVVGCNVALLNAKDYHRRHKVCELHSKAPKVIVLGLEQRFCQQCSRFHLVSEFDNAKRSCRRRLAGHNERRRKS
Links
Other
SBP
family TFs
Other
Salix purpurea
TFs
241 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy