BGIOSGA028267 (Oryza indica)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 BGIOSGA028267 T323766_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA028267-PA Sigma 70 302 372

Links

Other Sigma 70 family TFs
Other Oryza indica TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRADI1G00750 Brachypodium distachyon BRADI1G00750 N 0.930
F775_07378 Aegilops tauschii F775_07378 N 0.930
GRMZM2G144196 Zea mays GRMZM2G144196 N 0.972
GSMUA_Achr11G17050_001 Musa acuminata GSMUA_Achr11G17050_001 N 0.746
GSMUA_Achr4G30300_001 Musa acuminata GSMUA_Achr4G30300_001 N 0.730
LPERR08G06520 Leersia perrieri LPERR08G06520 N 0.986
MLOC_4725 Hordeum vulgare MLOC_4725 N 0.930
OB08G17050 Oryza brachyantha OB08G17050 N 0.986
OBART08G07320 Oryza barthii OBART08G07320 N 1.000
OGLUM08G08160 Oryza glumaepatula OGLUM08G08160 N 1.000
OLONG_007958 Oryza longistaminata OLONG_007958 N 1.000
OMERI03G18460 Oryza meridionalis OMERI03G18460 N 1.000
ONIVA08G08070 Oryza nivara ONIVA08G08070 N 1.000
OPUNC08G07030 Oryza punctata OPUNC08G07030 N 0.986
ORGLA08G0064000 Oryza glaberrima ORGLA08G0064000 N 1.000
ORUFI08G08440 Oryza rufipogon ORUFI08G08440 N 1.000
OS08G0242800 Oryza sativa OS08G0242800 N 1.000
Pavir.Ha01929 Panicum virgatum Pavir.Ha01929 N 0.972
Pavir.Ia00050 Panicum virgatum Pavir.Ia00050 N 0.958
Pavir.Ib04452 Panicum virgatum Pavir.Ib04452 N 0.986
Sb01g000390 Sorghum bicolor Sb01g000390 N 0.972
Si034994m.g Setaria italica Si034994m.g N 0.986
Traes_4AL_A0565AC4C Triticum aestivum Traes_4AL_A0565AC4C N 0.930
Traes_5BL_B1F704307 Triticum aestivum Traes_5BL_B1F704307 N 0.930
Traes_5DL_8DC4CC983 Triticum aestivum Traes_5DL_8DC4CC983 N 0.930
TRIUR3_06257 Triticum urartu TRIUR3_06257 N 0.930