OLONG_000145 (Oryza longistaminata)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 OLONG_000145 T323900_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_000145-R1 Sigma 70 230 300

Links

Other Sigma 70 family TFs
Other Oryza longistaminata TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL018695 Aedes aegypti AAEL018695 N 0.000
ACEP14882 Atta cephalotes ACEP14882 N 0.000
ACYPI001458 Acyrthosiphon pisum ACYPI001458 N 0.000
ADIR005407 Anopheles dirus ADIR005407 N 0.000
ANCCAN_04914 Ancylostoma caninum ANCCAN_04914 N 0.000
ANCCEY_13862 Ancylostoma ceylanicum ANCCEY_13862 N 0.000
ANCDUO_01695 Ancylostoma duodenale ANCDUO_01695 N 0.000
ASU_04577 Ascaris suum ASU_04577 N 0.000
BGIBMGA004821 Bombyx mori BGIBMGA004821 N 0.000
BGLB005972 Biomphalaria glabrata BGLB005972 N 0.000
Cflo_10027--XP_396763.3_APIME Camponotus floridanus Cflo_10027--XP_396763.3_APIME N 0.000
CPIJ005379 Culex quinquefasciatus CPIJ005379 N 0.000
CpipJ_CPIJ005379 Culex pipiens CpipJ_CPIJ005379 N 0.000
D917_06199 Trichinella nativa D917_06199 N 0.000
EFV54708 Trichinella spiralis EFV54708 N 0.000
ENSCING00000006442 Ciona intestinalis ENSCING00000006442 N 0.000
ENSCSAVG00000000171 Ciona savignyi ENSCSAVG00000000171 N 0.000
ENSLACG00000005237 Latimeria chalumnae ENSLACG00000005237 N 0.000
ENSLOCG00000014580 Lepisosteus oculatus ENSLOCG00000014580 N 0.000
ENSOANG00000004258 Ornithorhynchus anatinus ENSOANG00000004258 N 0.000
ENSOARG00000001263 Ovis aries ENSOARG00000001263 N 0.000
ENSOARG00000006350 Ovis aries ENSOARG00000006350 N 0.000
EVEC_0001015201 Enterobius vermicularis EVEC_0001015201 N 0.000
GA27157 Drosophila pseudoobscura FBgn0248528 N 0.000
GB44679 Apis mellifera GB44679 N 0.000
GD19594 Drosophila simulans FBgn0191087 N 0.000
GE24151 Drosophila yakuba FBgn0241285 N 0.000
GF17406 Drosophila ananassae FBgn0094424 N 0.000
GG10908 Drosophila erecta FBgn0103212 N 0.000
GH19193 Drosophila grimshawi FBgn0126660 N 0.000
GI24226 Drosophila mojavensis FBgn0146949 N 0.000
GJ10798 Drosophila virilis FBgn0198069 N 0.000
GK10851 Drosophila willistoni FBgn0212862 N 0.000
GL23145 Drosophila persimilis FBgn0160735 N 0.000
GM10605 Drosophila sechellia FBgn0165551 N 0.000
HCOI00708300 Haemonchus contortus HCOI00708300 N 0.000
HelroG187398 Helobdella robusta HelroG187398 N 0.000
HMEL015594 Heliconius melpomene HMEL015594 N 0.000
HPLM_0001560201 Haemonchus placei HPLM_0001560201 N 0.000
ISCW003309 Ixodes scapularis ISCW003309 N 0.000
KGM_11481 Danaus plexippus KGM_11481 N 0.000
L798_08977 Zootermopsis nevadensis L798_08977 N 0.000
LCUP000011 Lucilia cuprina LCUP000011 N 0.000
LotgiG180212 Lottia gigantea LotgiG180212 N 0.000
MDOA009084 Musca domestica MDOA009084 N 0.000
Mta1 Dipodomys ordii ENSDORG00000001352 N 0.000
MTA1-like Drosophila melanogaster FBgn0027951 N 0.000
MTA2 Echinops telfairi ENSETEG00000014846 N 0.000
MTA2 Choloepus hoffmanni ENSCHOG00000007762 N 0.000
mta2.L Xenopus laevis XB-GENE-947634 N 0.000
NBR_0001426901 Nippostrongylus brasiliensis NBR_0001426901 N 0.000
NV14853 Nasonia vitripennis NV14853 N 0.000
Sakowv30036706m.g Saccoglossus kowalevskii Sakowv30036706m.g N 0.000
scaffold26-EXSNAP2012.56 Pristionchus exspectatus scaffold26-EXSNAP2012.56 N 0.000
SINV11811 Solenopsis invicta SINV11811 N 0.000
SMAR013016 Strigamia maritima SMAR013016 N 0.000
SMUV_0000864901 Syphacia muris SMUV_0000864901 N 0.000
SPU_003705 Strongylocentrotus purpuratus SPU_003705 N 0.000
SPU_007389 Strongylocentrotus purpuratus SPU_007389 N 0.000
SVUK_0000622201 Strongylus vulgaris SVUK_0000622201 N 0.000
TC008832 Tribolium castaneum TC008832 N 0.000
TCNE_0001907801 Toxocara canis TCNE_0001907801 N 0.000
TELCIR_06695 Teladorsagia circumcincta TELCIR_06695 N 0.000
YQE_11825 Dendroctonus ponderosae YQE_11825 N 0.000