OPUNC11G10590 (Oryza punctata)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 OPUNC11G10590 T323920_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC11G10590.1 Sigma 70 329 399

Links

Other Sigma 70 family TFs
Other Oryza punctata TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Thhalv10007187m.g Eutrema salsugineum Thhalv10007187m.g N 0.704
Traes_4BL_9CB9E3F96 Triticum aestivum Traes_4BL_9CB9E3F96 N 0.957
Traes_4AS_DE644E0CF Triticum aestivum Traes_4AS_DE644E0CF N 0.845
Traes_4AS_26117D669 Triticum aestivum Traes_4AS_26117D669 N 0.957
Traes_4AL_26117D669 Triticum aestivum Traes_4AL_26117D669 N 0.957
Solyc01g081490.2 Solanum lycopersicum Solyc01g081490.2 N 0.718
Si035112m.g Setaria italica Si035112m.g N 0.857
Si026193m.g Setaria italica Si026193m.g N 0.972
Sb01g039810 Sorghum bicolor Sb01g039810 N 0.859
Sb0010s016080 Sorghum bicolor Sb0010s016080 N 0.972
PGSC0003DMG400031111 Solanum tuberosum PGSC0003DMG400031111 N 0.718
OS11G0448400 Oryza sativa OS11G0448400 N 0.986
Traes_4DL_65B3128BF Triticum aestivum Traes_4DL_65B3128BF N 0.957
Traes_4DL_B8D22E4C2 Triticum aestivum Traes_4DL_B8D22E4C2 N 0.845
TRIUR3_30646 Triticum urartu TRIUR3_30646 N 0.957
Pavir.J38369 Panicum virgatum Pavir.J38369 N 0.873
Pavir.J05262 Panicum virgatum Pavir.J05262 N 0.972
Pavir.Ia03759 Panicum virgatum Pavir.Ia03759 N 0.900
Pavir.Hb00670 Panicum virgatum Pavir.Hb00670 N 0.958
orange1.1g007404m.g Citrus sinensis orange1.1g007404m.g N 0.704
Gorai.007G347300 Gossypium raimondii Gorai.007G347300 N 0.704
Ciclev10030998m.g Citrus clementina Ciclev10030998m.g N 0.704
Carubv10008711m.g Capsella rubella Carubv10008711m.g N 0.704
Cagra.4395s0044 Capsella grandiflora Cagra.4395s0044 N 0.704
Bostr.25219s0090 Boechera stricta Bostr.25219s0090 N 0.704
mgf015824m Mimulus guttatus mgf015824m N 0.704
OS03G0271100 Oryza sativa OS03G0271100 N 0.859
ORUFI11G13080 Oryza rufipogon ORUFI11G13080 N 0.986
GRMZM2G143392 Zea mays GRMZM2G143392 N 0.944
GRMZM2G100086 Zea mays GRMZM2G100086 N 0.857
GRMZM2G003182 Zea mays GRMZM2G003182 N 0.857
SIGB Arabidopsis lyrata fgenesh2_kg.1__869__AT1G08540.1 N 0.704
F775_32094 Aegilops tauschii F775_32094 N 0.845
F775_14570 Aegilops tauschii F775_14570 N 0.957
BRADI4G19540 Brachypodium distachyon BRADI4G19540 N 0.957
BRADI1G66830 Brachypodium distachyon BRADI1G66830 N 0.859
Bra030732 Brassica rapa Bra030732 N 0.704
BGIOSGA015860 Oryza indica BGIOSGA015860 N 0.986
BGIOSGA012312 Oryza indica BGIOSGA012312 N 0.859
GRMZM2G164084 Zea mays GRMZM2G164084 N 0.857
GSMUA_Achr7G04860_001 Musa acuminata GSMUA_Achr7G04860_001 N 0.704
LPERR11G10050 Leersia perrieri LPERR11G10050 N 0.986
ORGLA11G0105900 Oryza glaberrima ORGLA11G0105900 N 0.986
ORGLA03G0116800 Oryza glaberrima ORGLA03G0116800 N 0.859
OPUNC03G11670 Oryza punctata OPUNC03G11670 N 0.859
ONIVA03G13860 Oryza nivara ONIVA03G13860 N 0.859
OLONG_012202 Oryza longistaminata OLONG_012202 N 0.986
OLONG_007716 Oryza longistaminata OLONG_007716 N 0.859
OGLUM11G12180 Oryza glumaepatula OGLUM11G12180 N 0.986
OBART03G12110 Oryza barthii OBART03G12110 N 0.859
OB11G19800 Oryza brachyantha OB11G19800 N 0.986
OB03G22220 Oryza brachyantha OB03G22220 N 0.859
MLOC_59299 Hordeum vulgare MLOC_59299 N 0.845
SIGB Arabidopsis thaliana AT1G08540 N 0.704