Aquca_053_00136 (Aquilegia coerulea)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 Aquca_053_00136 T324148_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_053_00136.1 Sigma 70 327 394
Aquca_053_00136.2 Sigma 70 326 393

Links

Other Sigma 70 family TFs
Other Aquilegia coerulea TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30078.m002307 Ricinus communis 30078.m002307 N 0.735
AMTR_s00009p00072720 Amborella trichopoda AMTR_s00009p00072720 N 0.761
Aquca_030_00101 Aquilegia coerulea Aquca_030_00101 N 0.912
Bo4g186560 Brassica oleracea Bo4g186560 N 0.779
Bostr.23794s0392 Boechera stricta Bostr.23794s0392 N 0.779
Bra017213 Brassica rapa Bra017213 N 0.732
Cagra.0558s0014 Capsella grandiflora Cagra.0558s0014 N 0.779
Carubv10022939m.g Capsella rubella Carubv10022939m.g N 0.779
Ciclev10011376m.g Citrus clementina Ciclev10011376m.g N 0.735
Cla018594 Citrullus lanatus Cla018594 N 0.704
Eucgr.K01255 Eucalyptus grandis Eucgr.K01255 N 0.735
evm.TU.supercontig_56.16 Carica papaya evm.TU.supercontig_56.16 N 0.706
GLYMA03G33970 Glycine max GLYMA03G33970 N 0.721
GLYMA19G36710 Glycine max GLYMA19G36710 N 0.721
Gorai.006G165200 Gossypium raimondii Gorai.006G165200 N 0.735
Gorai.009G415400 Gossypium raimondii Gorai.009G415400 N 0.721
GSMUA_Achr11G17050_001 Musa acuminata GSMUA_Achr11G17050_001 N 0.732
GSMUA_Achr4G30300_001 Musa acuminata GSMUA_Achr4G30300_001 N 0.784
mgf007606m Mimulus guttatus mgf007606m N 0.765
MTR_7g101840 Medicago truncatula MTR_7g101840 N 0.704
orange1.1g008352m.g Citrus sinensis orange1.1g008352m.g N 0.704
PDK_20s1626471g002 Phoenix dactylifera PDK_20s1626471g002 N 0.718
PGSC0003DMG400021553 Solanum tuberosum PGSC0003DMG400021553 N 0.765
Pm030137 Prunus mume Pm030137 N 0.721
POPTR_0006s12760 Populus trichocarpa POPTR_0006s12760 N 0.735
PRUPE_ppa003513mg Prunus persica PRUPE_ppa003513mg N 0.721
SapurV1A.0141s0230 Salix purpurea SapurV1A.0141s0230 N 0.704
SIGF Vitis vinifera VIT_08s0040g01560 N 0.704
SIGF Arabidopsis lyrata fgenesh2_kg.4__1742__AT2G36990.1 N 0.779
SIGF Arabidopsis thaliana AT2G36990 N 0.779
Solyc09g008040.2 Solanum lycopersicum Solyc09g008040.2 N 0.765
Thhalv10016472m.g Eutrema salsugineum Thhalv10016472m.g N 0.779