CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g010521m.g
(
Citrus sinensis
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
orange1.1g010521m.g
T324225_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g010521m
Sigma 70
269
339
LVMSNVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT
orange1.1g010527m
Sigma 70
269
339
LVMSNVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT
orange1.1g010835m
Sigma 70
260
330
LVMSNVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT
orange1.1g011454m
Sigma 70
269
339
LVMSNVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT
orange1.1g013447m
Sigma 70
269
339
LVMSNVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT
orange1.1g014764m
Sigma 70
269
339
LVMSNVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT
orange1.1g014852m
Sigma 70
269
339
LVMSNVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT
orange1.1g016321m
Sigma 70
269
331
LVMSNVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQVRLL
orange1.1g020126m
Sigma 70
269
330
LVMSNVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQSIS
orange1.1g022167m
Sigma 70
269
300
LVMSNVRLVMSIAQRYDNMGADMADLVQVIFY
Links
Other
Sigma 70
family TFs
Other
Citrus sinensis
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy